Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm37548-201ENSMUST00000194519 3814 ntBASIC5.76□□□□□ -1.49
Col8a1Q00780 4933425L06Rik-201ENSMUST00000022232 2157 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col8a1Q00780 Mbnl2-202ENSMUST00000167459 4534 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Col8a1Q00780 Mnat1-201ENSMUST00000021523 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col8a1Q00780 Triqk-203ENSMUST00000183345 3545 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
Col8a1Q00780 Olfr462-203ENSMUST00000213928 5598 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Col8a1Q00780 Grem2-201ENSMUST00000055294 3745 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col8a1Q00780 Gm18796-201ENSMUST00000190440 1767 ntBASIC5.75□□□□□ -1.49
Col8a1Q00780 Tm4sf1-205ENSMUST00000196979 3372 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col8a1Q00780 Gm43154-208ENSMUST00000209658 1442 ntTSL 5 BASIC5.75□□□□□ -1.49
Col8a1Q00780 Igip-201ENSMUST00000210490 1417 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Col8a1Q00780 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col8a1Q00780 Zfp385b-211ENSMUST00000171063 2668 ntAPPRIS ALT1 TSL 5 BASIC5.75□□□□□ -1.49
Col8a1Q00780 Gm37161-201ENSMUST00000191994 2697 ntBASIC5.75□□□□□ -1.49
Col8a1Q00780 Rapgef5-205ENSMUST00000222105 2677 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Col8a1Q00780 A730017C20Rik-201ENSMUST00000058633 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col8a1Q00780 Gm44723-201ENSMUST00000207369 4000 ntBASIC5.75□□□□□ -1.49
Col8a1Q00780 Gm26659-201ENSMUST00000181816 3655 ntTSL 5 BASIC5.75□□□□□ -1.49
Col8a1Q00780 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Col8a1Q00780 Impg1-202ENSMUST00000113250 2965 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col8a1Q00780 Gm33843-201ENSMUST00000219313 1637 ntTSL 5 BASIC5.75□□□□□ -1.49
Col8a1Q00780 Olfr734-203ENSMUST00000217152 4416 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Col8a1Q00780 Enpp6-201ENSMUST00000039840 4970 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col8a1Q00780 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col8a1Q00780 Mlip-211ENSMUST00000184415 1726 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Col8a1Q00780 Gm37010-201ENSMUST00000194539 1704 ntBASIC5.75□□□□□ -1.49
Col8a1Q00780 Mir546-201ENSMUST00000102105 121 ntBASIC5.75□□□□□ -1.49
Col8a1Q00780 Zfp971-201ENSMUST00000108925 923 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Col8a1Q00780 Gm14399-205ENSMUST00000109062 626 ntTSL 5 BASIC5.75□□□□□ -1.49
Col8a1Q00780 Gm14879-201ENSMUST00000117308 507 ntBASIC5.75□□□□□ -1.49
Col8a1Q00780 Gm13451-201ENSMUST00000117649 592 ntBASIC5.75□□□□□ -1.49
Col8a1Q00780 Gm8424-201ENSMUST00000117716 988 ntBASIC5.75□□□□□ -1.49
Col8a1Q00780 Gm15848-202ENSMUST00000125056 832 ntTSL 3 BASIC5.75□□□□□ -1.49
Col8a1Q00780 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC5.75□□□□□ -1.49
Col8a1Q00780 Gm9498-201ENSMUST00000140849 291 ntBASIC5.75□□□□□ -1.49
Col8a1Q00780 Gtsf1-205ENSMUST00000141364 700 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Col8a1Q00780 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Col8a1Q00780 Fam229b-209ENSMUST00000149949 736 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
Col8a1Q00780 1700109G15Rik-201ENSMUST00000150735 384 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Col8a1Q00780 Gm22836-201ENSMUST00000158441 61 ntBASIC5.75□□□□□ -1.49
Col8a1Q00780 Gm16226-203ENSMUST00000161197 395 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Col8a1Q00780 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC5.75□□□□□ -1.49
Col8a1Q00780 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC5.75□□□□□ -1.49
Col8a1Q00780 Gm23799-201ENSMUST00000175559 120 ntBASIC5.75□□□□□ -1.49
Col8a1Q00780 Gm22392-201ENSMUST00000177971 107 ntBASIC5.75□□□□□ -1.49
Col8a1Q00780 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC5.75□□□□□ -1.49
Col8a1Q00780 Gm27295-201ENSMUST00000184264 153 ntBASIC5.75□□□□□ -1.49
Col8a1Q00780 Gm37135-201ENSMUST00000192652 534 ntBASIC5.75□□□□□ -1.49
Col8a1Q00780 Gm2229-201ENSMUST00000193328 710 ntBASIC5.75□□□□□ -1.49
Col8a1Q00780 Gm20770-201ENSMUST00000193474 694 ntBASIC5.75□□□□□ -1.49
Col8a1Q00780 Gm43555-201ENSMUST00000196588 310 ntBASIC5.75□□□□□ -1.49
Col8a1Q00780 1700094M23Rik-201ENSMUST00000197695 695 ntTSL 5 BASIC5.75□□□□□ -1.49
Col8a1Q00780 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC5.75□□□□□ -1.49
Col8a1Q00780 Gm44135-201ENSMUST00000205221 368 ntBASIC5.75□□□□□ -1.49
Col8a1Q00780 Gm45448-201ENSMUST00000211739 209 ntBASIC5.75□□□□□ -1.49
Col8a1Q00780 Gm20163-201ENSMUST00000212232 494 ntTSL 3 BASIC5.75□□□□□ -1.49
Col8a1Q00780 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC5.75□□□□□ -1.49
Col8a1Q00780 AC166358.9-201ENSMUST00000220653 375 ntBASIC5.75□□□□□ -1.49
Col8a1Q00780 AC154573.2-201ENSMUST00000224174 378 ntBASIC5.75□□□□□ -1.49
Col8a1Q00780 AC131085.1-201ENSMUST00000224746 656 ntBASIC5.75□□□□□ -1.49
Col8a1Q00780 CT033778.1-201ENSMUST00000224767 767 ntBASIC5.75□□□□□ -1.49
Col8a1Q00780 AC154329.2-201ENSMUST00000225257 383 ntBASIC5.75□□□□□ -1.49
Col8a1Q00780 AC159205.4-201ENSMUST00000225964 704 ntBASIC5.75□□□□□ -1.49
Col8a1Q00780 AC129537.1-201ENSMUST00000226596 1228 ntBASIC5.75□□□□□ -1.49
Col8a1Q00780 AC113125.2-201ENSMUST00000226837 362 ntBASIC5.75□□□□□ -1.49
Col8a1Q00780 AC112142.1-206ENSMUST00000228136 982 ntBASIC5.75□□□□□ -1.49
Col8a1Q00780 AC117202.3-201ENSMUST00000228532 310 ntBASIC5.75□□□□□ -1.49
Col8a1Q00780 AC154806.5-204ENSMUST00000228900 867 ntBASIC5.75□□□□□ -1.49
Col8a1Q00780 4930591A17Rik-201ENSMUST00000041998 737 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Col8a1Q00780 Olfr472-203ENSMUST00000216937 5392 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
Col8a1Q00780 Ube4a-201ENSMUST00000117506 6039 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Col8a1Q00780 Gm37142-201ENSMUST00000193718 3110 ntBASIC5.75□□□□□ -1.49
Col8a1Q00780 Vmn1r51-201ENSMUST00000072859 2567 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Col8a1Q00780 AC135119.1-202ENSMUST00000228435 2203 ntBASIC5.75□□□□□ -1.49
Col8a1Q00780 Gm15907-201ENSMUST00000134284 2309 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Col8a1Q00780 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col8a1Q00780 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Col8a1Q00780 Zfp2-203ENSMUST00000116378 3069 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col8a1Q00780 Gm17529-201ENSMUST00000180738 3093 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Col8a1Q00780 Olfr1299-202ENSMUST00000213511 1783 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Col8a1Q00780 Pik3c2g-215ENSMUST00000218528 2712 ntTSL 5 BASIC5.75□□□□□ -1.49
Col8a1Q00780 F830112A20Rik-201ENSMUST00000194249 3552 ntBASIC5.75□□□□□ -1.49
Col8a1Q00780 Tnip3-201ENSMUST00000114236 3769 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col8a1Q00780 Cdh2-202ENSMUST00000115850 3785 ntTSL 5 BASIC5.75□□□□□ -1.49
Col8a1Q00780 Cpsf6-201ENSMUST00000069168 6526 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col8a1Q00780 Ehf-202ENSMUST00000111174 1307 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col8a1Q00780 Ift80-202ENSMUST00000107812 4063 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Col8a1Q00780 Bnip3l-201ENSMUST00000022634 3238 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col8a1Q00780 Ezh1-203ENSMUST00000107285 4193 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col8a1Q00780 C130075A20Rik-201ENSMUST00000198178 4176 ntBASIC5.74□□□□□ -1.49
Col8a1Q00780 Apobec3-203ENSMUST00000165537 2360 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col8a1Q00780 Polk-204ENSMUST00000221645 1644 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col8a1Q00780 Ppfibp2-202ENSMUST00000098134 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col8a1Q00780 AC153143.2-201ENSMUST00000220999 1804 ntBASIC5.74□□□□□ -1.49
Col8a1Q00780 Gm19176-201ENSMUST00000222149 1831 ntBASIC5.74□□□□□ -1.49
Col8a1Q00780 Wdr35-202ENSMUST00000111113 4312 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col8a1Q00780 Gm43343-201ENSMUST00000202454 1926 ntBASIC5.74□□□□□ -1.49
Col8a1Q00780 Sntg1-210ENSMUST00000191683 4510 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Col8a1Q00780 Prkd3-208ENSMUST00000168887 5884 ntAPPRIS P3 TSL 5 BASIC5.74□□□□□ -1.49
Col8a1Q00780 Gm43410-201ENSMUST00000197510 2234 ntBASIC5.74□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms