Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 1700007F19Rik-201ENSMUST00000188418 1642 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Cux1P53564 Wrn-202ENSMUST00000033991 6262 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Cux1P53564 Ikzf5-201ENSMUST00000046306 4430 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Cux1P53564 Gm44797-201ENSMUST00000208780 1837 ntBASIC8.76□□□□□ -1.01
Cux1P53564 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Cux1P53564 AC139758.3-201ENSMUST00000226853 2704 ntBASIC8.75□□□□□ -1.01
Cux1P53564 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Cux1P53564 Rpl5-ps1-201ENSMUST00000121367 894 ntBASIC8.75□□□□□ -1.01
Cux1P53564 Crem-224ENSMUST00000147138 436 ntTSL 5 BASIC8.75□□□□□ -1.01
Cux1P53564 Gm25383-201ENSMUST00000157810 144 ntBASIC8.75□□□□□ -1.01
Cux1P53564 Gm23279-201ENSMUST00000157912 97 ntBASIC8.75□□□□□ -1.01
Cux1P53564 Gm17086-201ENSMUST00000171346 484 ntBASIC8.75□□□□□ -1.01
Cux1P53564 Gm26318-201ENSMUST00000176507 96 ntBASIC8.75□□□□□ -1.01
Cux1P53564 Gm26731-201ENSMUST00000180683 543 ntBASIC8.75□□□□□ -1.01
Cux1P53564 Olfr697-202ENSMUST00000217734 1190 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
Cux1P53564 CT033781.1-201ENSMUST00000223128 454 ntTSL 5 BASIC8.75□□□□□ -1.01
Cux1P53564 AC125405.1-201ENSMUST00000226406 589 ntBASIC8.75□□□□□ -1.01
Cux1P53564 Gm15500-201ENSMUST00000071523 894 ntBASIC8.75□□□□□ -1.01
Cux1P53564 Lrrc51-201ENSMUST00000078448 873 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Cux1P53564 Gm37717-201ENSMUST00000192647 3027 ntBASIC8.75□□□□□ -1.01
Cux1P53564 Gm5594-201ENSMUST00000172712 1429 ntBASIC8.75□□□□□ -1.01
Cux1P53564 Gm17791-201ENSMUST00000185660 1501 ntBASIC8.75□□□□□ -1.01
Cux1P53564 Olfr127-202ENSMUST00000217223 3733 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
Cux1P53564 Olfr47-202ENSMUST00000215569 1603 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
Cux1P53564 Morc2b-202ENSMUST00000131954 3857 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
Cux1P53564 Olfr770-202ENSMUST00000203887 1658 ntAPPRIS P1 TSL 3 BASIC8.75□□□□□ -1.01
Cux1P53564 Chrm3-201ENSMUST00000063093 1770 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
Cux1P53564 Ms4a1-201ENSMUST00000169159 3075 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Cux1P53564 Olfr1392-207ENSMUST00000217275 3098 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
Cux1P53564 Scaper-202ENSMUST00000214747 5231 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
Cux1P53564 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC8.75□□□□□ -1.01
Cux1P53564 Zfp35-201ENSMUST00000074941 3040 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Cux1P53564 Etl4-209ENSMUST00000114627 7413 ntAPPRIS P3 TSL 5 BASIC8.75□□□□□ -1.01
Cux1P53564 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Cux1P53564 Gm22499-201ENSMUST00000104501 135 ntBASIC8.75□□□□□ -1.01
Cux1P53564 Gm15400-201ENSMUST00000118944 601 ntBASIC8.75□□□□□ -1.01
Cux1P53564 Gm11677-201ENSMUST00000121349 977 ntBASIC8.75□□□□□ -1.01
Cux1P53564 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC8.75□□□□□ -1.01
Cux1P53564 Gm3170-201ENSMUST00000168753 850 ntBASIC8.75□□□□□ -1.01
Cux1P53564 Gm3348-201ENSMUST00000177813 850 ntBASIC8.75□□□□□ -1.01
Cux1P53564 Gm8669-201ENSMUST00000183839 945 ntBASIC8.75□□□□□ -1.01
Cux1P53564 Mir6400-201ENSMUST00000184870 92 ntBASIC8.75□□□□□ -1.01
Cux1P53564 Gm26911-202ENSMUST00000204244 763 ntTSL 5 BASIC8.75□□□□□ -1.01
Cux1P53564 Gm23514-201ENSMUST00000082827 130 ntBASIC8.75□□□□□ -1.01
Cux1P53564 Gm37040-201ENSMUST00000191740 1824 ntBASIC8.74□□□□□ -1.01
Cux1P53564 Pik3c2a-204ENSMUST00000206219 5670 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
Cux1P53564 Pigb-201ENSMUST00000093819 2866 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Cux1P53564 Gm42892-201ENSMUST00000196227 3973 ntBASIC8.74□□□□□ -1.01
Cux1P53564 Lmbrd2-204ENSMUST00000227556 8099 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
Cux1P53564 Mrpl1-202ENSMUST00000117766 3556 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
Cux1P53564 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Cux1P53564 Golgb1-203ENSMUST00000114812 11012 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
Cux1P53564 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Cux1P53564 Gm21051-201ENSMUST00000221757 1688 ntBASIC8.74□□□□□ -1.01
Cux1P53564 B3gnt5-203ENSMUST00000121344 4175 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Cux1P53564 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
Cux1P53564 Rpl36a-201ENSMUST00000113211 483 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Cux1P53564 Gm14769-201ENSMUST00000118590 432 ntBASIC8.74□□□□□ -1.01
Cux1P53564 Gm14874-201ENSMUST00000118995 438 ntBASIC8.74□□□□□ -1.01
Cux1P53564 Gm14998-201ENSMUST00000120502 495 ntBASIC8.74□□□□□ -1.01
Cux1P53564 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC8.74□□□□□ -1.01
Cux1P53564 Gm18728-201ENSMUST00000186155 753 ntBASIC8.74□□□□□ -1.01
Cux1P53564 Mrgpra14-201ENSMUST00000189782 913 ntBASIC8.74□□□□□ -1.01
Cux1P53564 Gm43768-201ENSMUST00000198380 1258 ntBASIC8.74□□□□□ -1.01
Cux1P53564 Gm31026-201ENSMUST00000198762 821 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Cux1P53564 Btk-201ENSMUST00000033617 2540 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Cux1P53564 Gabpb2-202ENSMUST00000098873 8272 ntAPPRIS P2 TSL 5 BASIC8.73□□□□□ -1.01
Cux1P53564 Olfr1427-203ENSMUST00000216069 1863 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
Cux1P53564 AC154682.1-201ENSMUST00000225871 3124 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Cux1P53564 Obox3-201ENSMUST00000086122 1890 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
Cux1P53564 Olfr1173-202ENSMUST00000216887 5363 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Cux1P53564 4933400C23Rik-201ENSMUST00000188610 1708 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Cux1P53564 Olfr736-204ENSMUST00000215227 2485 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
Cux1P53564 Crtam-203ENSMUST00000180872 4443 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Cux1P53564 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC8.73□□□□□ -1.01
Cux1P53564 AC162936.1-201ENSMUST00000223676 2368 ntBASIC8.73□□□□□ -1.01
Cux1P53564 Gm24429-201ENSMUST00000104076 132 ntBASIC8.73□□□□□ -1.01
Cux1P53564 Snhg6-205ENSMUST00000182819 816 ntTSL 2 BASIC8.73□□□□□ -1.01
Cux1P53564 Gm27234-201ENSMUST00000183362 581 ntTSL 5 BASIC8.73□□□□□ -1.01
Cux1P53564 Gm44604-201ENSMUST00000205475 496 ntBASIC8.73□□□□□ -1.01
Cux1P53564 Olfr1310-201ENSMUST00000207169 1009 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Cux1P53564 Olfr1452-ps1-201ENSMUST00000208396 925 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Cux1P53564 AC159886.1-201ENSMUST00000217099 1091 ntBASIC8.73□□□□□ -1.01
Cux1P53564 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Cux1P53564 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
Cux1P53564 Zbbx-203ENSMUST00000107776 1978 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
Cux1P53564 Gm36099-201ENSMUST00000221946 1798 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Cux1P53564 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Cux1P53564 Olfr25-202ENSMUST00000212354 1362 ntAPPRIS ALT2 BASIC8.72□□□□□ -1.01
Cux1P53564 Atp6v1g3-201ENSMUST00000027643 1887 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Cux1P53564 Fktn-203ENSMUST00000128667 6080 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Cux1P53564 CT025604.1-201ENSMUST00000221111 3436 ntBASIC8.72□□□□□ -1.01
Cux1P53564 Gm13435-201ENSMUST00000120111 1023 ntBASIC8.72□□□□□ -1.01
Cux1P53564 Gm12654-201ENSMUST00000120387 587 ntBASIC8.72□□□□□ -1.01
Cux1P53564 Gm13077-201ENSMUST00000121941 484 ntBASIC8.72□□□□□ -1.01
Cux1P53564 Gm18800-202ENSMUST00000188688 1105 ntBASIC8.72□□□□□ -1.01
Cux1P53564 Gm18553-201ENSMUST00000194152 634 ntBASIC8.72□□□□□ -1.01
Cux1P53564 Gm33952-201ENSMUST00000197795 408 ntBASIC8.72□□□□□ -1.01
Cux1P53564 Olfr792-201ENSMUST00000076575 936 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
Cux1P53564 Gm24706-201ENSMUST00000082806 137 ntBASIC8.72□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms