Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Ros1-202ENSMUST00000218452 6960 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
Shmt1P50431 Atp2b4-206ENSMUST00000143567 11725 ntAPPRIS P3 TSL 5 BASIC6.49□□□□□ -1.37
Shmt1P50431 Cdh9-202ENSMUST00000228307 3539 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Shmt1P50431 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Shmt1P50431 Mttp-202ENSMUST00000098580 3072 ntTSL 5 BASIC6.48□□□□□ -1.37
Shmt1P50431 Gm26994-201ENSMUST00000182027 1571 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Shmt1P50431 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Shmt1P50431 AC131667.1-201ENSMUST00000214665 2175 ntBASIC6.48□□□□□ -1.37
Shmt1P50431 A330076H08Rik-202ENSMUST00000207694 1836 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Shmt1P50431 Tnfsf4-201ENSMUST00000028024 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Shmt1P50431 AC141476.1-201ENSMUST00000224988 3387 ntBASIC6.48□□□□□ -1.37
Shmt1P50431 Atp10b-201ENSMUST00000077659 6825 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Shmt1P50431 Dcun1d4-202ENSMUST00000087181 4117 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Shmt1P50431 Dock7-205ENSMUST00000127417 6796 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Shmt1P50431 Hivep3-202ENSMUST00000106307 11838 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Shmt1P50431 Gm18493-201ENSMUST00000192084 1612 ntBASIC6.48□□□□□ -1.37
Shmt1P50431 Sorbs2os-201ENSMUST00000135116 2474 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Shmt1P50431 Ccdc66-201ENSMUST00000050480 2457 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Shmt1P50431 Gm25917-201ENSMUST00000104267 130 ntBASIC6.48□□□□□ -1.37
Shmt1P50431 Gm23440-201ENSMUST00000104299 130 ntBASIC6.48□□□□□ -1.37
Shmt1P50431 Gm12697-201ENSMUST00000118008 667 ntBASIC6.48□□□□□ -1.37
Shmt1P50431 Gm14103-201ENSMUST00000119075 366 ntBASIC6.48□□□□□ -1.37
Shmt1P50431 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC6.48□□□□□ -1.37
Shmt1P50431 Gm16359-201ENSMUST00000124511 289 ntBASIC6.48□□□□□ -1.37
Shmt1P50431 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Shmt1P50431 Gm23467-201ENSMUST00000157127 159 ntBASIC6.48□□□□□ -1.37
Shmt1P50431 Gm24241-201ENSMUST00000157787 145 ntBASIC6.48□□□□□ -1.37
Shmt1P50431 Gm26000-201ENSMUST00000157991 107 ntBASIC6.48□□□□□ -1.37
Shmt1P50431 Gm25432-201ENSMUST00000158284 66 ntBASIC6.48□□□□□ -1.37
Shmt1P50431 Gm26169-201ENSMUST00000158420 135 ntBASIC6.48□□□□□ -1.37
Shmt1P50431 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC6.48□□□□□ -1.37
Shmt1P50431 Cldn34a-201ENSMUST00000164764 636 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Shmt1P50431 Gm5218-201ENSMUST00000172270 465 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Shmt1P50431 Gm27030-201ENSMUST00000182551 464 ntBASIC6.48□□□□□ -1.37
Shmt1P50431 Gm28750-201ENSMUST00000186327 658 ntTSL 5 BASIC6.48□□□□□ -1.37
Shmt1P50431 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Shmt1P50431 1700064J06Rik-201ENSMUST00000187551 386 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Shmt1P50431 Gm29111-201ENSMUST00000188823 696 ntBASIC6.48□□□□□ -1.37
Shmt1P50431 1700124L16Rik-202ENSMUST00000189308 546 ntTSL 5 BASIC6.48□□□□□ -1.37
Shmt1P50431 Gm28584-201ENSMUST00000191489 696 ntBASIC6.48□□□□□ -1.37
Shmt1P50431 Gm38138-201ENSMUST00000193274 696 ntBASIC6.48□□□□□ -1.37
Shmt1P50431 Gm38291-201ENSMUST00000193671 259 ntBASIC6.48□□□□□ -1.37
Shmt1P50431 Gm42886-201ENSMUST00000199214 466 ntBASIC6.48□□□□□ -1.37
Shmt1P50431 Gm42857-201ENSMUST00000200823 339 ntBASIC6.48□□□□□ -1.37
Shmt1P50431 Gm43269-201ENSMUST00000202075 518 ntTSL 3 BASIC6.48□□□□□ -1.37
Shmt1P50431 Gm43929-201ENSMUST00000203025 409 ntBASIC6.48□□□□□ -1.37
Shmt1P50431 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC6.48□□□□□ -1.37
Shmt1P50431 Klra14-ps-202ENSMUST00000203601 1104 ntTSL 5 BASIC6.48□□□□□ -1.37
Shmt1P50431 Gm44128-201ENSMUST00000204909 219 ntBASIC6.48□□□□□ -1.37
Shmt1P50431 Gm20074-201ENSMUST00000208144 484 ntBASIC6.48□□□□□ -1.37
Shmt1P50431 Gm45646-201ENSMUST00000210983 441 ntTSL 5 BASIC6.48□□□□□ -1.37
Shmt1P50431 Olfr1089-201ENSMUST00000214317 1118 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Shmt1P50431 Amd-ps6-201ENSMUST00000214455 1003 ntBASIC6.48□□□□□ -1.37
Shmt1P50431 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC6.48□□□□□ -1.37
Shmt1P50431 Gm18592-201ENSMUST00000221529 276 ntBASIC6.48□□□□□ -1.37
Shmt1P50431 1700019C18Rik-202ENSMUST00000221688 1047 ntTSL 5 BASIC6.48□□□□□ -1.37
Shmt1P50431 AC144733.1-201ENSMUST00000222893 1289 ntBASIC6.48□□□□□ -1.37
Shmt1P50431 AC154594.1-201ENSMUST00000225171 1273 ntBASIC6.48□□□□□ -1.37
Shmt1P50431 AC099612.2-201ENSMUST00000226824 721 ntBASIC6.48□□□□□ -1.37
Shmt1P50431 Tmed6-201ENSMUST00000034393 871 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Shmt1P50431 Olfr902-201ENSMUST00000050733 1056 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Shmt1P50431 Olfr481-201ENSMUST00000067143 939 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Shmt1P50431 Olfr516-201ENSMUST00000071410 945 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Shmt1P50431 Olfr467-201ENSMUST00000084756 927 ntBASIC6.48□□□□□ -1.37
Shmt1P50431 Ube2nl-201ENSMUST00000085228 456 ntBASIC6.48□□□□□ -1.37
Shmt1P50431 Olfr1307-202ENSMUST00000099606 939 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Shmt1P50431 Gm18066-201ENSMUST00000210904 1774 ntBASIC6.48□□□□□ -1.37
Shmt1P50431 Mfap1a-201ENSMUST00000089926 4198 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Shmt1P50431 Sphkap-205ENSMUST00000160953 8154 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Shmt1P50431 Adam34-202ENSMUST00000212185 2335 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Shmt1P50431 Pramel5-202ENSMUST00000105752 2060 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Shmt1P50431 Atf7-210ENSMUST00000184616 7147 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Shmt1P50431 Csnka2ip-201ENSMUST00000089279 1336 ntAPPRIS P2 BASIC6.48□□□□□ -1.37
Shmt1P50431 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Shmt1P50431 Olfr1199-202ENSMUST00000124021 2967 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
Shmt1P50431 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Shmt1P50431 Vwc2l-201ENSMUST00000053922 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Shmt1P50431 Ncr1-202ENSMUST00000126417 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Shmt1P50431 Catsperg2-209ENSMUST00000209126 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Shmt1P50431 Vmn2r14-201ENSMUST00000170341 2547 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Shmt1P50431 Vrk2-202ENSMUST00000109504 1642 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Shmt1P50431 Fmn1-201ENSMUST00000081349 4235 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Shmt1P50431 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
Shmt1P50431 Il21-201ENSMUST00000029273 3072 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
Shmt1P50431 Mylk4-201ENSMUST00000057428 5571 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Shmt1P50431 Nr3c2-201ENSMUST00000034031 2955 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
Shmt1P50431 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC6.47□□□□□ -1.37
Shmt1P50431 1110015O18Rik-202ENSMUST00000183944 1533 ntTSL 3 BASIC6.47□□□□□ -1.37
Shmt1P50431 CT010577.1-202ENSMUST00000226187 1903 ntBASIC6.47□□□□□ -1.37
Shmt1P50431 Zfp760-201ENSMUST00000073312 4209 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Shmt1P50431 Gm7146-201ENSMUST00000116079 739 ntBASIC6.47□□□□□ -1.37
Shmt1P50431 Olfr997-ps1-201ENSMUST00000117353 939 ntBASIC6.47□□□□□ -1.37
Shmt1P50431 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Shmt1P50431 Gm4764-201ENSMUST00000130207 1233 ntBASIC6.47□□□□□ -1.37
Shmt1P50431 1700061H18Rik-201ENSMUST00000139488 634 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Shmt1P50431 Gm16260-201ENSMUST00000155141 304 ntBASIC6.47□□□□□ -1.37
Shmt1P50431 4930423M02Rik-202ENSMUST00000156903 1205 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Shmt1P50431 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Shmt1P50431 Vmn1r176-201ENSMUST00000171073 915 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Shmt1P50431 Obox2-202ENSMUST00000172478 818 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms