Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm42972-201ENSMUST00000196937 5617 ntBASIC5.98□□□□□ -1.45
Hoxd3P09027 Erp44-201ENSMUST00000030028 2624 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Hoxd3P09027 6530403H02Rik-202ENSMUST00000182124 3191 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Hoxd3P09027 Iqch-206ENSMUST00000171243 3099 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
Hoxd3P09027 Ifi202b-201ENSMUST00000000266 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Hoxd3P09027 Fgf1-201ENSMUST00000040647 3981 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Hoxd3P09027 Rbms3-202ENSMUST00000068962 3320 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
Hoxd3P09027 Gm18908-201ENSMUST00000207125 1483 ntBASIC5.98□□□□□ -1.45
Hoxd3P09027 Trim5-201ENSMUST00000051795 1467 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
Hoxd3P09027 Bmpr1a-202ENSMUST00000165280 1945 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Hoxd3P09027 Sema6a-202ENSMUST00000076043 4123 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Hoxd3P09027 Smarca2-242ENSMUST00000208751 1846 ntTSL 5 BASIC5.98□□□□□ -1.45
Hoxd3P09027 CT009480.2-201ENSMUST00000225152 3369 ntBASIC5.98□□□□□ -1.45
Hoxd3P09027 Trav8n-2-201ENSMUST00000103632 408 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Hoxd3P09027 Gm25725-201ENSMUST00000104528 130 ntBASIC5.98□□□□□ -1.45
Hoxd3P09027 Gm16431-201ENSMUST00000117454 431 ntBASIC5.98□□□□□ -1.45
Hoxd3P09027 Gm4919-201ENSMUST00000117825 604 ntBASIC5.98□□□□□ -1.45
Hoxd3P09027 4930448K20Rik-201ENSMUST00000120570 998 ntBASIC5.98□□□□□ -1.45
Hoxd3P09027 Gm15586-201ENSMUST00000121218 528 ntBASIC5.98□□□□□ -1.45
Hoxd3P09027 Gm11805-201ENSMUST00000121238 600 ntBASIC5.98□□□□□ -1.45
Hoxd3P09027 Gm14053-201ENSMUST00000121662 470 ntBASIC5.98□□□□□ -1.45
Hoxd3P09027 Gm22208-201ENSMUST00000122658 110 ntBASIC5.98□□□□□ -1.45
Hoxd3P09027 4930555O08Rik-201ENSMUST00000122821 668 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Hoxd3P09027 Gm11844-201ENSMUST00000129207 459 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Hoxd3P09027 1700123O12Rik-202ENSMUST00000141312 660 ntTSL 3 BASIC5.98□□□□□ -1.45
Hoxd3P09027 Gm12126-201ENSMUST00000147717 619 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Hoxd3P09027 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC5.98□□□□□ -1.45
Hoxd3P09027 Gm14241-201ENSMUST00000151260 264 ntTSL 5 BASIC5.98□□□□□ -1.45
Hoxd3P09027 Gm7437-201ENSMUST00000156744 661 ntTSL 2 BASIC5.98□□□□□ -1.45
Hoxd3P09027 Olfr443-ps1-201ENSMUST00000163240 915 ntBASIC5.98□□□□□ -1.45
Hoxd3P09027 Gm18833-201ENSMUST00000173218 862 ntBASIC5.98□□□□□ -1.45
Hoxd3P09027 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC5.98□□□□□ -1.45
Hoxd3P09027 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Hoxd3P09027 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Hoxd3P09027 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Hoxd3P09027 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Hoxd3P09027 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Hoxd3P09027 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Hoxd3P09027 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Hoxd3P09027 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Hoxd3P09027 Gm25873-201ENSMUST00000180317 107 ntBASIC5.98□□□□□ -1.45
Hoxd3P09027 Gm26898-201ENSMUST00000181678 384 ntBASIC5.98□□□□□ -1.45
Hoxd3P09027 Mir6340-201ENSMUST00000183857 119 ntBASIC5.98□□□□□ -1.45
Hoxd3P09027 Gm27190-201ENSMUST00000184890 542 ntBASIC5.98□□□□□ -1.45
Hoxd3P09027 Gm28980-201ENSMUST00000187877 219 ntBASIC5.98□□□□□ -1.45
Hoxd3P09027 C430002N11Rik-202ENSMUST00000189067 1029 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Hoxd3P09027 Gm28299-201ENSMUST00000189908 339 ntBASIC5.98□□□□□ -1.45
Hoxd3P09027 Gm28408-201ENSMUST00000191557 463 ntBASIC5.98□□□□□ -1.45
Hoxd3P09027 C920008G01Rik-201ENSMUST00000196756 380 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Hoxd3P09027 Gm42916-201ENSMUST00000197142 1042 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Hoxd3P09027 Gm42767-201ENSMUST00000198583 632 ntBASIC5.98□□□□□ -1.45
Hoxd3P09027 Gm42573-201ENSMUST00000202327 478 ntBASIC5.98□□□□□ -1.45
Hoxd3P09027 Gm44129-201ENSMUST00000203511 675 ntTSL 3 BASIC5.98□□□□□ -1.45
Hoxd3P09027 Gm45063-201ENSMUST00000203726 472 ntBASIC5.98□□□□□ -1.45
Hoxd3P09027 Gm45727-201ENSMUST00000212886 572 ntBASIC5.98□□□□□ -1.45
Hoxd3P09027 AC122508.1-201ENSMUST00000218365 233 ntTSL 5 BASIC5.98□□□□□ -1.45
Hoxd3P09027 Gm18972-201ENSMUST00000218873 630 ntBASIC5.98□□□□□ -1.45
Hoxd3P09027 AC113204.1-202ENSMUST00000219846 578 ntTSL 3 BASIC5.98□□□□□ -1.45
Hoxd3P09027 B230303A05Rik-202ENSMUST00000220728 478 ntBASIC5.98□□□□□ -1.45
Hoxd3P09027 AC154510.1-201ENSMUST00000223925 737 ntBASIC5.98□□□□□ -1.45
Hoxd3P09027 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Hoxd3P09027 AC161537.1-202ENSMUST00000228450 868 ntBASIC5.98□□□□□ -1.45
Hoxd3P09027 H2-M11-201ENSMUST00000041964 1006 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Hoxd3P09027 Olfr1023-201ENSMUST00000056408 936 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Hoxd3P09027 Fpr2-201ENSMUST00000064068 1133 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Hoxd3P09027 Olfr1265-201ENSMUST00000080311 930 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Hoxd3P09027 Gm25926-201ENSMUST00000082899 160 ntBASIC5.98□□□□□ -1.45
Hoxd3P09027 Gm23679-201ENSMUST00000083161 119 ntBASIC5.98□□□□□ -1.45
Hoxd3P09027 Mir325-201ENSMUST00000083491 98 ntBASIC5.98□□□□□ -1.45
Hoxd3P09027 Olfr676-201ENSMUST00000098162 954 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Hoxd3P09027 Gm37940-201ENSMUST00000194243 3251 ntBASIC5.98□□□□□ -1.45
Hoxd3P09027 Olfr221-201ENSMUST00000052560 2741 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Hoxd3P09027 Spata1-202ENSMUST00000093951 2712 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Hoxd3P09027 Gm12633-201ENSMUST00000117742 1705 ntBASIC5.98□□□□□ -1.45
Hoxd3P09027 4930453H23Rik-201ENSMUST00000125569 1719 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Hoxd3P09027 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Hoxd3P09027 Gm31152-201ENSMUST00000210319 2171 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Hoxd3P09027 Dusp3-206ENSMUST00000151678 4084 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Hoxd3P09027 Ubtfl1-202ENSMUST00000164441 2639 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Hoxd3P09027 Olfr314-202ENSMUST00000205189 2647 ntAPPRIS P1 TSL 3 BASIC5.98□□□□□ -1.45
Hoxd3P09027 Dnah10-201ENSMUST00000058440 14038 ntAPPRIS P2 TSL 5 BASIC5.98□□□□□ -1.45
Hoxd3P09027 Gm17130-201ENSMUST00000201542 2683 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Hoxd3P09027 Gm28497-201ENSMUST00000189646 3029 ntBASIC5.98□□□□□ -1.45
Hoxd3P09027 Celf1-207ENSMUST00000111452 7800 ntAPPRIS P4 TSL 5 BASIC5.98□□□□□ -1.45
Hoxd3P09027 Dnmbp-203ENSMUST00000212048 4186 ntTSL 5 BASIC5.98□□□□□ -1.45
Hoxd3P09027 Olfr1199-203ENSMUST00000131038 2557 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
Hoxd3P09027 Abcc12-203ENSMUST00000131423 4893 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Hoxd3P09027 AW209491-201ENSMUST00000038690 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Hoxd3P09027 Vmn1r31-205ENSMUST00000228586 2115 ntAPPRIS P2 BASIC5.98□□□□□ -1.45
Hoxd3P09027 Trim12c-202ENSMUST00000130139 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Hoxd3P09027 Adgrl2-212ENSMUST00000198779 4592 ntTSL 5 BASIC5.98□□□□□ -1.45
Hoxd3P09027 Zfp661-202ENSMUST00000110366 4912 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Hoxd3P09027 Gm10744-201ENSMUST00000220184 2706 ntBASIC5.97□□□□□ -1.45
Hoxd3P09027 Bpifc-201ENSMUST00000061699 2714 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Hoxd3P09027 AC154461.6-201ENSMUST00000224815 2630 ntBASIC5.97□□□□□ -1.45
Hoxd3P09027 Etv1-210ENSMUST00000161980 1939 ntTSL 5 BASIC5.97□□□□□ -1.45
Hoxd3P09027 Gm37022-201ENSMUST00000192517 2254 ntBASIC5.97□□□□□ -1.45
Hoxd3P09027 Slc12a1-203ENSMUST00000110495 4642 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
Hoxd3P09027 Zfyve9-201ENSMUST00000042185 2170 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Hoxd3P09027 Fbxw22-201ENSMUST00000080626 1835 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 113.9 ms