Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
TnfP06804 Gm22122-201ENSMUST00000175147 200 ntBASIC6.08□□□□□ -1.44
TnfP06804 Gm21917-201ENSMUST00000177831 666 ntTSL 2 BASIC6.08□□□□□ -1.44
TnfP06804 Gm24407-201ENSMUST00000177864 141 ntBASIC6.08□□□□□ -1.44
TnfP06804 Gm19585-202ENSMUST00000191539 327 ntTSL 3 BASIC6.08□□□□□ -1.44
TnfP06804 Gm37716-201ENSMUST00000193553 947 ntBASIC6.08□□□□□ -1.44
TnfP06804 Gm38670-201ENSMUST00000199248 77 ntBASIC6.08□□□□□ -1.44
TnfP06804 Gm43973-201ENSMUST00000203562 210 ntBASIC6.08□□□□□ -1.44
TnfP06804 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC6.08□□□□□ -1.44
TnfP06804 AC123665.6-201ENSMUST00000228568 538 ntBASIC6.08□□□□□ -1.44
TnfP06804 Gm23330-201ENSMUST00000082660 164 ntBASIC6.08□□□□□ -1.44
TnfP06804 Cfap221-201ENSMUST00000037840 2511 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
TnfP06804 Olfr406-202ENSMUST00000214303 2842 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
TnfP06804 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
TnfP06804 Gm37690-202ENSMUST00000192684 1497 ntTSL 5 BASIC6.08□□□□□ -1.44
TnfP06804 Gm38451-201ENSMUST00000208329 2646 ntBASIC6.08□□□□□ -1.44
TnfP06804 Btbd35f14-201ENSMUST00000105117 1701 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
TnfP06804 Vmn1r11-202ENSMUST00000226968 2522 ntAPPRIS P2 BASIC6.07□□□□□ -1.44
TnfP06804 Fkbp15-202ENSMUST00000084528 3329 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
TnfP06804 Asxl3-202ENSMUST00000120223 11485 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
TnfP06804 Gm42930-201ENSMUST00000200872 3260 ntBASIC6.07□□□□□ -1.44
TnfP06804 CT025660.2-201ENSMUST00000217654 3539 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TnfP06804 4930544L04Rik-202ENSMUST00000211181 3204 ntBASIC6.07□□□□□ -1.44
TnfP06804 Toporsl-201ENSMUST00000029995 2668 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TnfP06804 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
TnfP06804 Gm42436-201ENSMUST00000198804 3656 ntBASIC6.07□□□□□ -1.44
TnfP06804 AC114585.1-201ENSMUST00000228080 3680 ntBASIC6.07□□□□□ -1.44
TnfP06804 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TnfP06804 Poln-206ENSMUST00000202638 2814 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TnfP06804 Gm44676-201ENSMUST00000208520 3055 ntBASIC6.07□□□□□ -1.44
TnfP06804 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
TnfP06804 Magea6-202ENSMUST00000112562 1212 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
TnfP06804 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC6.07□□□□□ -1.44
TnfP06804 Mup-ps19-201ENSMUST00000120390 519 ntBASIC6.07□□□□□ -1.44
TnfP06804 Gm13533-201ENSMUST00000121104 177 ntBASIC6.07□□□□□ -1.44
TnfP06804 Gm14212-201ENSMUST00000122023 826 ntBASIC6.07□□□□□ -1.44
TnfP06804 Ftx-201ENSMUST00000123841 673 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TnfP06804 Klra8-201ENSMUST00000014476 1178 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TnfP06804 Lcp1-209ENSMUST00000145303 3841 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TnfP06804 Gm15775-201ENSMUST00000159796 538 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TnfP06804 AC122858.3-202ENSMUST00000161721 433 ntTSL 5 BASIC6.07□□□□□ -1.44
TnfP06804 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
TnfP06804 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
TnfP06804 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
TnfP06804 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TnfP06804 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
TnfP06804 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TnfP06804 Rps12-ps24-201ENSMUST00000182321 381 ntBASIC6.07□□□□□ -1.44
TnfP06804 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC6.07□□□□□ -1.44
TnfP06804 Gm29159-201ENSMUST00000187969 379 ntBASIC6.07□□□□□ -1.44
TnfP06804 Gm28507-201ENSMUST00000189737 703 ntBASIC6.07□□□□□ -1.44
TnfP06804 Gm28467-201ENSMUST00000190981 318 ntBASIC6.07□□□□□ -1.44
TnfP06804 Gm36991-201ENSMUST00000191800 648 ntBASIC6.07□□□□□ -1.44
TnfP06804 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC6.07□□□□□ -1.44
TnfP06804 Gm45169-201ENSMUST00000205717 639 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TnfP06804 Gm30928-201ENSMUST00000205858 459 ntTSL 3 BASIC6.07□□□□□ -1.44
TnfP06804 4930567H12Rik-202ENSMUST00000212512 766 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TnfP06804 AC122858.1-201ENSMUST00000226212 433 ntBASIC6.07□□□□□ -1.44
TnfP06804 AC122858.3-201ENSMUST00000226341 740 ntBASIC6.07□□□□□ -1.44
TnfP06804 AC122858.1-202ENSMUST00000228290 986 ntBASIC6.07□□□□□ -1.44
TnfP06804 AC154806.5-205ENSMUST00000228828 411 ntBASIC6.07□□□□□ -1.44
TnfP06804 Olfr447-201ENSMUST00000055763 933 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
TnfP06804 Magea6-201ENSMUST00000076986 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TnfP06804 Mir218-2-201ENSMUST00000083649 110 ntBASIC6.07□□□□□ -1.44
TnfP06804 Gm156-202ENSMUST00000118532 2000 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TnfP06804 Gm37132-201ENSMUST00000195553 2238 ntBASIC6.07□□□□□ -1.44
TnfP06804 Ehf-203ENSMUST00000111176 3696 ntTSL 5 BASIC6.07□□□□□ -1.44
TnfP06804 Olfr2-205ENSMUST00000214105 5798 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
TnfP06804 Gm26603-201ENSMUST00000181380 2861 ntTSL 5 BASIC6.07□□□□□ -1.44
TnfP06804 Arhgef9-203ENSMUST00000113878 5012 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
TnfP06804 Gm9239-201ENSMUST00000186942 2557 ntBASIC6.07□□□□□ -1.44
TnfP06804 Speer4a-201ENSMUST00000079447 2980 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TnfP06804 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
TnfP06804 Gm44586-201ENSMUST00000207166 2737 ntBASIC6.06□□□□□ -1.44
TnfP06804 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TnfP06804 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TnfP06804 Gm18852-201ENSMUST00000184149 3593 ntBASIC6.06□□□□□ -1.44
TnfP06804 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
TnfP06804 Gm2016-201ENSMUST00000110147 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TnfP06804 Gm36099-201ENSMUST00000221946 1798 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TnfP06804 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TnfP06804 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
TnfP06804 Gsdmc-201ENSMUST00000110125 2405 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
TnfP06804 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
TnfP06804 Gm43330-201ENSMUST00000199706 2153 ntBASIC6.06□□□□□ -1.44
TnfP06804 Cc2d2b-205ENSMUST00000224596 4762 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
TnfP06804 Vmn2r104-201ENSMUST00000168050 2583 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
TnfP06804 Trbv13-2-201ENSMUST00000103270 340 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
TnfP06804 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
TnfP06804 Gm13451-201ENSMUST00000117649 592 ntBASIC6.06□□□□□ -1.44
TnfP06804 Serpinb1-ps1-201ENSMUST00000118548 586 ntBASIC6.06□□□□□ -1.44
TnfP06804 Tnfsf13os-202ENSMUST00000144033 578 ntTSL 5 BASIC6.06□□□□□ -1.44
TnfP06804 Gm22311-201ENSMUST00000158006 110 ntBASIC6.06□□□□□ -1.44
TnfP06804 Gm3696-202ENSMUST00000179898 612 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
TnfP06804 Ighv8-5-201ENSMUST00000194257 358 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
TnfP06804 Rrh-208ENSMUST00000200079 1106 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TnfP06804 6720469O03Rik-201ENSMUST00000206785 1201 ntBASIC6.06□□□□□ -1.44
TnfP06804 Gm19880-201ENSMUST00000207731 318 ntBASIC6.06□□□□□ -1.44
TnfP06804 Gm44992-209ENSMUST00000209680 1083 ntTSL 5 BASIC6.06□□□□□ -1.44
TnfP06804 2310008N11Rik-204ENSMUST00000210955 457 ntTSL 5 BASIC6.06□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms