Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm44319-201ENSMUST00000196974 93 ntBASIC4.59□□□□□ -1.67
Hmgb3O54879 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Hmgb3O54879 Gm42109-202ENSMUST00000200893 664 ntTSL 3 BASIC4.59□□□□□ -1.67
Hmgb3O54879 BC049739-201ENSMUST00000202626 660 ntBASIC4.59□□□□□ -1.67
Hmgb3O54879 Gm44836-201ENSMUST00000205869 336 ntTSL 5 BASIC4.59□□□□□ -1.67
Hmgb3O54879 Gm45870-201ENSMUST00000211269 601 ntBASIC4.59□□□□□ -1.67
Hmgb3O54879 1190001M18Rik-201ENSMUST00000215937 1270 ntBASIC4.59□□□□□ -1.67
Hmgb3O54879 AC162467.3-201ENSMUST00000219716 2172 ntBASIC4.59□□□□□ -1.67
Hmgb3O54879 AC154734.1-201ENSMUST00000219957 2141 ntBASIC4.59□□□□□ -1.67
Hmgb3O54879 AC079644.2-201ENSMUST00000220581 322 ntBASIC4.59□□□□□ -1.67
Hmgb3O54879 AC159238.1-201ENSMUST00000220699 343 ntTSL 3 BASIC4.59□□□□□ -1.67
Hmgb3O54879 Zfand4-204ENSMUST00000221069 501 ntTSL 3 BASIC4.59□□□□□ -1.67
Hmgb3O54879 AC131187.2-201ENSMUST00000223936 994 ntBASIC4.59□□□□□ -1.67
Hmgb3O54879 AC117608.2-201ENSMUST00000224124 1363 ntBASIC4.59□□□□□ -1.67
Hmgb3O54879 AC154646.1-201ENSMUST00000225011 1092 ntBASIC4.59□□□□□ -1.67
Hmgb3O54879 AC154573.1-201ENSMUST00000225913 4659 ntBASIC4.59□□□□□ -1.67
Hmgb3O54879 AC170810.1-201ENSMUST00000228267 672 ntBASIC4.59□□□□□ -1.67
Hmgb3O54879 Sprr2j-ps-201ENSMUST00000029533 678 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Hmgb3O54879 Spag5-201ENSMUST00000045026 3887 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Hmgb3O54879 Plac1-201ENSMUST00000074861 1041 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Hmgb3O54879 Xlr4a-201ENSMUST00000078775 1162 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Hmgb3O54879 BC061237-201ENSMUST00000096899 899 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Hmgb3O54879 Olfr1079-201ENSMUST00000099882 948 ntAPPRIS P2 BASIC4.59□□□□□ -1.67
Hmgb3O54879 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC4.59□□□□□ -1.68
Hmgb3O54879 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.68
Hmgb3O54879 Gm44586-201ENSMUST00000207166 2737 ntBASIC4.59□□□□□ -1.68
Hmgb3O54879 Olfr9-201ENSMUST00000091996 2672 ntAPPRIS P1 BASIC4.59□□□□□ -1.68
Hmgb3O54879 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC4.59□□□□□ -1.68
Hmgb3O54879 Vmn2r114-201ENSMUST00000168033 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
Hmgb3O54879 Gm17473-201ENSMUST00000180585 2216 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Hmgb3O54879 Gabpb1-201ENSMUST00000039978 1991 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Hmgb3O54879 Prg4-206ENSMUST00000161611 3821 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Hmgb3O54879 Vmn2r34-201ENSMUST00000173459 3616 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Hmgb3O54879 Slc5a12-202ENSMUST00000111026 3518 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Hmgb3O54879 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Hmgb3O54879 Gm44695-201ENSMUST00000205567 1631 ntBASIC4.58□□□□□ -1.68
Hmgb3O54879 Kynu-203ENSMUST00000112826 1587 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Hmgb3O54879 Gm15713-201ENSMUST00000155900 1546 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Hmgb3O54879 Gm8750-201ENSMUST00000173278 1537 ntBASIC4.58□□□□□ -1.68
Hmgb3O54879 Gm14976-201ENSMUST00000117055 1394 ntBASIC4.58□□□□□ -1.68
Hmgb3O54879 AC123629.1-201ENSMUST00000225669 1364 ntBASIC4.58□□□□□ -1.68
Hmgb3O54879 Tra2b-201ENSMUST00000023564 1369 ntTSL 3 BASIC4.58□□□□□ -1.68
Hmgb3O54879 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
Hmgb3O54879 Klrb1-201ENSMUST00000112110 724 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Hmgb3O54879 Gm12131-201ENSMUST00000117479 359 ntBASIC4.58□□□□□ -1.68
Hmgb3O54879 Gm11699-201ENSMUST00000119016 401 ntBASIC4.58□□□□□ -1.68
Hmgb3O54879 Gm11517-201ENSMUST00000119491 387 ntBASIC4.58□□□□□ -1.68
Hmgb3O54879 Xlr5e-ps-201ENSMUST00000122043 711 ntBASIC4.58□□□□□ -1.68
Hmgb3O54879 Gm13480-201ENSMUST00000125095 1000 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Hmgb3O54879 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC4.58□□□□□ -1.68
Hmgb3O54879 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Hmgb3O54879 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC4.58□□□□□ -1.68
Hmgb3O54879 Gm15564-201ENSMUST00000144134 545 ntTSL 3 BASIC4.58□□□□□ -1.68
Hmgb3O54879 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC4.58□□□□□ -1.68
Hmgb3O54879 Mirt2-201ENSMUST00000175179 285 ntBASIC4.58□□□□□ -1.68
Hmgb3O54879 Vis1-201ENSMUST00000183957 201 ntBASIC4.58□□□□□ -1.68
Hmgb3O54879 Mir6908-201ENSMUST00000184056 63 ntBASIC4.58□□□□□ -1.68
Hmgb3O54879 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC4.58□□□□□ -1.68
Hmgb3O54879 Gm29156-201ENSMUST00000187764 499 ntBASIC4.58□□□□□ -1.68
Hmgb3O54879 Gm29161-201ENSMUST00000188250 699 ntBASIC4.58□□□□□ -1.68
Hmgb3O54879 Gm38040-201ENSMUST00000193505 225 ntBASIC4.58□□□□□ -1.68
Hmgb3O54879 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC4.58□□□□□ -1.68
Hmgb3O54879 Gm2287-202ENSMUST00000199619 1000 ntBASIC4.58□□□□□ -1.68
Hmgb3O54879 Gm8523-201ENSMUST00000211386 552 ntBASIC4.58□□□□□ -1.68
Hmgb3O54879 Olfr1092-ps1-201ENSMUST00000216544 398 ntBASIC4.58□□□□□ -1.68
Hmgb3O54879 AC156576.2-202ENSMUST00000222525 411 ntBASIC4.58□□□□□ -1.68
Hmgb3O54879 Gm34552-201ENSMUST00000223381 636 ntTSL 5 BASIC4.58□□□□□ -1.68
Hmgb3O54879 Mcts1-201ENSMUST00000000365 783 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Hmgb3O54879 1700014D04Rik-201ENSMUST00000055343 795 ntBASIC4.58□□□□□ -1.68
Hmgb3O54879 Olfr684-201ENSMUST00000060893 939 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Hmgb3O54879 Mir138-1-201ENSMUST00000083480 99 ntBASIC4.58□□□□□ -1.68
Hmgb3O54879 n-R5s58-201ENSMUST00000093682 119 ntBASIC4.58□□□□□ -1.68
Hmgb3O54879 Fpr-rs6-201ENSMUST00000095636 1020 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Hmgb3O54879 Olfr570-201ENSMUST00000098215 1045 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Hmgb3O54879 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC4.58□□□□□ -1.68
Hmgb3O54879 Armc4-201ENSMUST00000081275 3477 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Hmgb3O54879 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
Hmgb3O54879 Gabrg2-202ENSMUST00000070735 2234 ntAPPRIS P4 TSL 1 (best) BASIC4.58□□□□□ -1.68
Hmgb3O54879 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Hmgb3O54879 Slamf7-203ENSMUST00000192195 3975 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
Hmgb3O54879 Zfp950-204ENSMUST00000143264 4825 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Hmgb3O54879 Gm6145-206ENSMUST00000211251 2850 ntTSL 5 BASIC4.58□□□□□ -1.68
Hmgb3O54879 Nlrp9a-203ENSMUST00000117252 2796 ntTSL 2 BASIC4.58□□□□□ -1.68
Hmgb3O54879 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Hmgb3O54879 Klhl15-204ENSMUST00000113915 6241 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Hmgb3O54879 Hgf-204ENSMUST00000199581 3468 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Hmgb3O54879 Gm5930-201ENSMUST00000111863 1746 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Hmgb3O54879 Gm13212-203ENSMUST00000119718 2498 ntTSL 5 BASIC4.57□□□□□ -1.68
Hmgb3O54879 Olfr616-202ENSMUST00000214806 1641 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Hmgb3O54879 Snhg14-214ENSMUST00000191191 3991 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Hmgb3O54879 Gm42520-201ENSMUST00000199642 1502 ntBASIC4.57□□□□□ -1.68
Hmgb3O54879 Cdh12-203ENSMUST00000227496 6004 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Hmgb3O54879 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Hmgb3O54879 Ptprc-203ENSMUST00000182283 4702 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
Hmgb3O54879 Slc39a12-202ENSMUST00000114731 2648 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
Hmgb3O54879 Gm43389-201ENSMUST00000196080 2595 ntBASIC4.57□□□□□ -1.68
Hmgb3O54879 Hspa9-ps1-201ENSMUST00000119602 1933 ntBASIC4.57□□□□□ -1.68
Hmgb3O54879 Gm25345-201ENSMUST00000104505 133 ntBASIC4.57□□□□□ -1.68
Hmgb3O54879 Cd47-202ENSMUST00000114496 867 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Hmgb3O54879 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms