Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Gm44840-201ENSMUST00000208983 1168 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Srp54bE9PXC0 Gm18996-201ENSMUST00000214851 755 ntBASIC5.87□□□□□ -1.47
Srp54bE9PXC0 AC132384.3-201ENSMUST00000219709 472 ntBASIC5.87□□□□□ -1.47
Srp54bE9PXC0 4930452L12Rik-201ENSMUST00000220158 785 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Srp54bE9PXC0 Gm7550-201ENSMUST00000223334 282 ntTSL 5 BASIC5.87□□□□□ -1.47
Srp54bE9PXC0 Gm23737-201ENSMUST00000082547 159 ntBASIC5.87□□□□□ -1.47
Srp54bE9PXC0 Gm24200-201ENSMUST00000082955 157 ntBASIC5.87□□□□□ -1.47
Srp54bE9PXC0 4930432M17Rik-201ENSMUST00000098646 525 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Srp54bE9PXC0 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Srp54bE9PXC0 Fbxw27-208ENSMUST00000212725 1483 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Srp54bE9PXC0 Sspn-202ENSMUST00000111701 4512 ntTSL 3 BASIC5.87□□□□□ -1.47
Srp54bE9PXC0 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Srp54bE9PXC0 Olfr972-202ENSMUST00000215303 1641 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
Srp54bE9PXC0 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC5.87□□□□□ -1.47
Srp54bE9PXC0 Gm14912-201ENSMUST00000120166 1773 ntBASIC5.87□□□□□ -1.47
Srp54bE9PXC0 AC154354.1-201ENSMUST00000224585 2109 ntBASIC5.87□□□□□ -1.47
Srp54bE9PXC0 Cep57l1-204ENSMUST00000186239 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Srp54bE9PXC0 Gm43627-201ENSMUST00000197119 2299 ntBASIC5.87□□□□□ -1.47
Srp54bE9PXC0 Gm43588-201ENSMUST00000201862 2298 ntBASIC5.87□□□□□ -1.47
Srp54bE9PXC0 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Srp54bE9PXC0 C630031E19Rik-201ENSMUST00000218114 3059 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Srp54bE9PXC0 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Srp54bE9PXC0 Gm43503-201ENSMUST00000200033 3408 ntBASIC5.87□□□□□ -1.47
Srp54bE9PXC0 Cfap70-201ENSMUST00000022348 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Srp54bE9PXC0 Synrg-208ENSMUST00000183714 3651 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Srp54bE9PXC0 Vmn1r51-209ENSMUST00000227911 4021 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Srp54bE9PXC0 Dnah1-201ENSMUST00000048603 12872 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Srp54bE9PXC0 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Srp54bE9PXC0 Zfp81-201ENSMUST00000054072 6639 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Srp54bE9PXC0 Mum1l1-202ENSMUST00000113042 4182 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Srp54bE9PXC0 Zzz3-201ENSMUST00000089982 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Srp54bE9PXC0 Gm7108-201ENSMUST00000118038 3407 ntBASIC5.86□□□□□ -1.47
Srp54bE9PXC0 Gm20300-201ENSMUST00000214634 3440 ntBASIC5.86□□□□□ -1.47
Srp54bE9PXC0 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Srp54bE9PXC0 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Srp54bE9PXC0 Tmem45a-201ENSMUST00000023435 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Srp54bE9PXC0 AC124579.1-201ENSMUST00000223468 2520 ntBASIC5.86□□□□□ -1.47
Srp54bE9PXC0 AC169985.1-201ENSMUST00000223648 2439 ntBASIC5.86□□□□□ -1.47
Srp54bE9PXC0 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Srp54bE9PXC0 Olfr1006-202ENSMUST00000216084 1572 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Srp54bE9PXC0 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Srp54bE9PXC0 Muc15-201ENSMUST00000090332 1318 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Srp54bE9PXC0 Pigp-201ENSMUST00000113905 758 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Srp54bE9PXC0 Eaf2-203ENSMUST00000114825 668 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Srp54bE9PXC0 Gm15073-201ENSMUST00000117432 634 ntBASIC5.86□□□□□ -1.47
Srp54bE9PXC0 Gm8424-201ENSMUST00000117716 988 ntBASIC5.86□□□□□ -1.47
Srp54bE9PXC0 Gm12677-201ENSMUST00000118668 426 ntBASIC5.86□□□□□ -1.47
Srp54bE9PXC0 Gm15233-201ENSMUST00000118747 400 ntBASIC5.86□□□□□ -1.47
Srp54bE9PXC0 Olfr590-ps1-201ENSMUST00000118801 898 ntBASIC5.86□□□□□ -1.47
Srp54bE9PXC0 Gm7927-201ENSMUST00000118818 880 ntBASIC5.86□□□□□ -1.47
Srp54bE9PXC0 Gm13245-201ENSMUST00000119646 260 ntBASIC5.86□□□□□ -1.47
Srp54bE9PXC0 Gm13489-201ENSMUST00000121234 971 ntBASIC5.86□□□□□ -1.47
Srp54bE9PXC0 Gm13440-201ENSMUST00000121665 496 ntBASIC5.86□□□□□ -1.47
Srp54bE9PXC0 Gm13838-201ENSMUST00000132130 531 ntTSL 5 BASIC5.86□□□□□ -1.47
Srp54bE9PXC0 1700048M11Rik-201ENSMUST00000132861 485 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Srp54bE9PXC0 Gm11423-201ENSMUST00000136051 655 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Srp54bE9PXC0 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC5.86□□□□□ -1.47
Srp54bE9PXC0 Gm6808-201ENSMUST00000162341 807 ntBASIC5.86□□□□□ -1.47
Srp54bE9PXC0 Mir3095-201ENSMUST00000175552 87 ntBASIC5.86□□□□□ -1.47
Srp54bE9PXC0 Gm498-203ENSMUST00000179036 990 ntTSL 5 BASIC5.86□□□□□ -1.47
Srp54bE9PXC0 Vis1-201ENSMUST00000183957 201 ntBASIC5.86□□□□□ -1.47
Srp54bE9PXC0 Trav6-4-202ENSMUST00000184650 338 ntAPPRIS ALT2 BASIC5.86□□□□□ -1.47
Srp54bE9PXC0 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Srp54bE9PXC0 Gm29529-201ENSMUST00000187154 714 ntTSL 3 BASIC5.86□□□□□ -1.47
Srp54bE9PXC0 Alox5ap-203ENSMUST00000200928 356 ntTSL 3 BASIC5.86□□□□□ -1.47
Srp54bE9PXC0 Gm45276-201ENSMUST00000209549 1086 ntBASIC5.86□□□□□ -1.47
Srp54bE9PXC0 Gm4032-201ENSMUST00000210886 487 ntBASIC5.86□□□□□ -1.47
Srp54bE9PXC0 AC113082.2-201ENSMUST00000215876 756 ntTSL 3 BASIC5.86□□□□□ -1.47
Srp54bE9PXC0 Gm31904-201ENSMUST00000219446 877 ntTSL 5 BASIC5.86□□□□□ -1.47
Srp54bE9PXC0 AC124426.2-201ENSMUST00000220886 404 ntTSL 5 BASIC5.86□□□□□ -1.47
Srp54bE9PXC0 AC174797.2-203ENSMUST00000224017 716 ntBASIC5.86□□□□□ -1.47
Srp54bE9PXC0 Olfr137-201ENSMUST00000057394 942 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Srp54bE9PXC0 Olfr107-201ENSMUST00000077008 1033 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Srp54bE9PXC0 Pth-201ENSMUST00000079793 710 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Srp54bE9PXC0 Mir412-201ENSMUST00000083636 80 ntBASIC5.86□□□□□ -1.47
Srp54bE9PXC0 n-R5s161-201ENSMUST00000083728 114 ntBASIC5.86□□□□□ -1.47
Srp54bE9PXC0 Scgb2b27-201ENSMUST00000085620 512 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
Srp54bE9PXC0 Vmn1r168-201ENSMUST00000098704 930 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Srp54bE9PXC0 Gm37342-201ENSMUST00000194588 4965 ntBASIC5.86□□□□□ -1.47
Srp54bE9PXC0 Olfr1301-202ENSMUST00000207590 4820 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
Srp54bE9PXC0 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Srp54bE9PXC0 Zranb2-202ENSMUST00000106057 2737 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Srp54bE9PXC0 Lrriq1-201ENSMUST00000020043 2542 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Srp54bE9PXC0 Adam6b-201ENSMUST00000063317 2547 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Srp54bE9PXC0 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Srp54bE9PXC0 P2ry12-203ENSMUST00000196583 2344 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Srp54bE9PXC0 Gm1966-201ENSMUST00000184540 7293 ntBASIC5.86□□□□□ -1.47
Srp54bE9PXC0 Ankrd55-205ENSMUST00000223871 3209 ntBASIC5.86□□□□□ -1.47
Srp54bE9PXC0 Gm3286-203ENSMUST00000201629 1945 ntAPPRIS P3 TSL 3 BASIC5.86□□□□□ -1.47
Srp54bE9PXC0 Dnhd1-203ENSMUST00000145988 14536 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Srp54bE9PXC0 AC158982.1-205ENSMUST00000227339 1876 ntBASIC5.85□□□□□ -1.47
Srp54bE9PXC0 Rbpj-202ENSMUST00000087360 5252 ntTSL 5 BASIC5.85□□□□□ -1.47
Srp54bE9PXC0 Tcf7l2-202ENSMUST00000061496 4053 ntAPPRIS P3 TSL 5 BASIC5.85□□□□□ -1.47
Srp54bE9PXC0 Gm37186-201ENSMUST00000195629 2861 ntBASIC5.85□□□□□ -1.47
Srp54bE9PXC0 Olfr922-202ENSMUST00000213164 4028 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Srp54bE9PXC0 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Srp54bE9PXC0 Utp14b-201ENSMUST00000053760 7393 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Srp54bE9PXC0 Ckap5-203ENSMUST00000111337 6384 ntTSL 5 BASIC5.85□□□□□ -1.47
Srp54bE9PXC0 Lrp2bp-203ENSMUST00000110381 3421 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Srp54bE9PXC0 Ighv1-64-201ENSMUST00000103535 405 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms