Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Gm22411-201ENSMUST00000175462 126 ntBASIC6.35□□□□□ -1.39
Scn3aA2ASI5 Gm22002-201ENSMUST00000175622 125 ntBASIC6.35□□□□□ -1.39
Scn3aA2ASI5 Mir7087-201ENSMUST00000184840 70 ntBASIC6.35□□□□□ -1.39
Scn3aA2ASI5 Gm44992-209ENSMUST00000209680 1083 ntTSL 5 BASIC6.35□□□□□ -1.39
Scn3aA2ASI5 AC165245.1-201ENSMUST00000214181 636 ntTSL 3 BASIC6.35□□□□□ -1.39
Scn3aA2ASI5 Gm46102-201ENSMUST00000217005 731 ntTSL 5 BASIC6.35□□□□□ -1.39
Scn3aA2ASI5 Gm36543-201ENSMUST00000217933 542 ntTSL 5 BASIC6.35□□□□□ -1.39
Scn3aA2ASI5 AC125405.1-201ENSMUST00000226406 589 ntBASIC6.35□□□□□ -1.39
Scn3aA2ASI5 AC133203.2-201ENSMUST00000226709 464 ntBASIC6.35□□□□□ -1.39
Scn3aA2ASI5 Olfr371-201ENSMUST00000070849 939 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Scn3aA2ASI5 Add3-203ENSMUST00000111741 4520 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
Scn3aA2ASI5 Dtna-203ENSMUST00000220904 3860 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Scn3aA2ASI5 Trip12-206ENSMUST00000186465 9590 ntAPPRIS P2 TSL 5 BASIC6.35□□□□□ -1.39
Scn3aA2ASI5 Dclk1-202ENSMUST00000070418 7012 ntTSL 5 BASIC6.35□□□□□ -1.39
Scn3aA2ASI5 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Scn3aA2ASI5 B130006D01Rik-201ENSMUST00000100534 3124 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Scn3aA2ASI5 Ncoa7-212ENSMUST00000217644 2256 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Scn3aA2ASI5 Galnt5-203ENSMUST00000166729 3812 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
Scn3aA2ASI5 Gm38036-201ENSMUST00000194586 3564 ntBASIC6.35□□□□□ -1.39
Scn3aA2ASI5 AC120347.2-201ENSMUST00000222224 2015 ntBASIC6.35□□□□□ -1.39
Scn3aA2ASI5 Gm38372-201ENSMUST00000194854 4028 ntBASIC6.35□□□□□ -1.39
Scn3aA2ASI5 Spam1-203ENSMUST00000202569 2107 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Scn3aA2ASI5 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Scn3aA2ASI5 Eif2s2-205ENSMUST00000166171 2312 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Scn3aA2ASI5 Wap-201ENSMUST00000102910 551 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Scn3aA2ASI5 Rnf148-201ENSMUST00000104979 1239 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Scn3aA2ASI5 Gm11826-201ENSMUST00000118781 438 ntBASIC6.35□□□□□ -1.39
Scn3aA2ASI5 Gm3170-201ENSMUST00000168753 850 ntBASIC6.35□□□□□ -1.39
Scn3aA2ASI5 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Scn3aA2ASI5 Gm3348-201ENSMUST00000177813 850 ntBASIC6.35□□□□□ -1.39
Scn3aA2ASI5 Zcchc10-201ENSMUST00000018383 1267 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Scn3aA2ASI5 AC138284.5-201ENSMUST00000214389 652 ntBASIC6.35□□□□□ -1.39
Scn3aA2ASI5 Olfr1257-201ENSMUST00000060795 1016 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Scn3aA2ASI5 Olfr307-201ENSMUST00000069279 1012 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Scn3aA2ASI5 Gm7676-201ENSMUST00000084055 319 ntBASIC6.35□□□□□ -1.39
Scn3aA2ASI5 Ddr2-205ENSMUST00000194690 8590 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Scn3aA2ASI5 Gm28320-201ENSMUST00000187777 2273 ntBASIC6.34□□□□□ -1.39
Scn3aA2ASI5 Gm14367-201ENSMUST00000119214 1497 ntBASIC6.34□□□□□ -1.39
Scn3aA2ASI5 Btbd35f9-201ENSMUST00000178219 1497 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Scn3aA2ASI5 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Scn3aA2ASI5 Btbd35f30-201ENSMUST00000179069 1497 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Scn3aA2ASI5 Btbd35f25-201ENSMUST00000179086 1497 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Scn3aA2ASI5 Btbd35f6-201ENSMUST00000179466 1497 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Scn3aA2ASI5 Btbd35f29-201ENSMUST00000179532 1497 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Scn3aA2ASI5 Btbd35f8-201ENSMUST00000180004 1497 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Scn3aA2ASI5 Btbd35f26-201ENSMUST00000180197 1497 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Scn3aA2ASI5 Gm21292-201ENSMUST00000171947 1563 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Scn3aA2ASI5 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Scn3aA2ASI5 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Scn3aA2ASI5 Gm6902-201ENSMUST00000179072 1335 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Scn3aA2ASI5 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC6.34□□□□□ -1.39
Scn3aA2ASI5 Gsdme-202ENSMUST00000101405 4383 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Scn3aA2ASI5 Tmprss11a-201ENSMUST00000101073 2657 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Scn3aA2ASI5 Vmn1r-ps11-201ENSMUST00000176097 853 ntBASIC6.34□□□□□ -1.39
Scn3aA2ASI5 Gm21917-201ENSMUST00000177831 666 ntTSL 2 BASIC6.34□□□□□ -1.39
Scn3aA2ASI5 6720469O03Rik-201ENSMUST00000206785 1201 ntBASIC6.34□□□□□ -1.39
Scn3aA2ASI5 Gm34096-201ENSMUST00000211296 530 ntTSL 3 BASIC6.34□□□□□ -1.39
Scn3aA2ASI5 AC153937.2-201ENSMUST00000218485 632 ntTSL 5 BASIC6.34□□□□□ -1.39
Scn3aA2ASI5 AC164629.3-201ENSMUST00000219325 611 ntTSL 5 BASIC6.34□□□□□ -1.39
Scn3aA2ASI5 1700020D12Rik-201ENSMUST00000221140 426 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Scn3aA2ASI5 AC156016.5-201ENSMUST00000228742 355 ntBASIC6.34□□□□□ -1.39
Scn3aA2ASI5 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Scn3aA2ASI5 Vmn1r177-201ENSMUST00000073967 930 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Scn3aA2ASI5 Vmn1r46-201ENSMUST00000075797 930 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Scn3aA2ASI5 Cpa2-201ENSMUST00000096066 1388 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Scn3aA2ASI5 Malat1-201ENSMUST00000172812 6983 ntBASIC6.34□□□□□ -1.39
Scn3aA2ASI5 Serpinb9-202ENSMUST00000063191 3472 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Scn3aA2ASI5 Gm38026-201ENSMUST00000193284 3880 ntBASIC6.34□□□□□ -1.39
Scn3aA2ASI5 Poln-206ENSMUST00000202638 2814 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Scn3aA2ASI5 Gm17137-201ENSMUST00000164106 4371 ntBASIC6.34□□□□□ -1.39
Scn3aA2ASI5 AC158982.1-205ENSMUST00000227339 1876 ntBASIC6.34□□□□□ -1.39
Scn3aA2ASI5 Gm44255-201ENSMUST00000203456 2053 ntBASIC6.34□□□□□ -1.4
Scn3aA2ASI5 AC158232.1-201ENSMUST00000217882 2071 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Scn3aA2ASI5 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC6.34□□□□□ -1.4
Scn3aA2ASI5 Pign-206ENSMUST00000187537 4006 ntTSL 5 BASIC6.34□□□□□ -1.4
Scn3aA2ASI5 9930111J21Rik2-202ENSMUST00000101295 5985 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Scn3aA2ASI5 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Scn3aA2ASI5 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC6.34□□□□□ -1.4
Scn3aA2ASI5 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Scn3aA2ASI5 Muc5b-201ENSMUST00000165147 14964 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Scn3aA2ASI5 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC6.33□□□□□ -1.4
Scn3aA2ASI5 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Scn3aA2ASI5 Gm26603-201ENSMUST00000181380 2861 ntTSL 5 BASIC6.33□□□□□ -1.4
Scn3aA2ASI5 Mpdz-202ENSMUST00000107258 7241 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Scn3aA2ASI5 Gm45632-201ENSMUST00000211532 1888 ntBASIC6.33□□□□□ -1.4
Scn3aA2ASI5 Gm37429-201ENSMUST00000193807 1799 ntBASIC6.33□□□□□ -1.4
Scn3aA2ASI5 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC6.33□□□□□ -1.4
Scn3aA2ASI5 Gm14520-201ENSMUST00000119258 387 ntBASIC6.33□□□□□ -1.4
Scn3aA2ASI5 Gm14472-201ENSMUST00000119815 282 ntBASIC6.33□□□□□ -1.4
Scn3aA2ASI5 Gm14175-201ENSMUST00000119835 241 ntBASIC6.33□□□□□ -1.4
Scn3aA2ASI5 Gm15152-201ENSMUST00000121540 394 ntBASIC6.33□□□□□ -1.4
Scn3aA2ASI5 Crem-216ENSMUST00000136961 807 ntTSL 5 BASIC6.33□□□□□ -1.4
Scn3aA2ASI5 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC6.33□□□□□ -1.4
Scn3aA2ASI5 Lgals8-208ENSMUST00000144283 1148 ntTSL 5 BASIC6.33□□□□□ -1.4
Scn3aA2ASI5 G630016G05Rik-201ENSMUST00000152412 796 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Scn3aA2ASI5 Gm24295-201ENSMUST00000158298 131 ntBASIC6.33□□□□□ -1.4
Scn3aA2ASI5 Gm4141-201ENSMUST00000174364 921 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Scn3aA2ASI5 Gm4201-201ENSMUST00000174775 921 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Scn3aA2ASI5 Gm4617-201ENSMUST00000178993 331 ntBASIC6.33□□□□□ -1.4
Scn3aA2ASI5 Gm17952-201ENSMUST00000193914 747 ntBASIC6.33□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms