Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm37106-201ENSMUST00000193760 1532 ntBASIC6.6□□□□□ -1.35
Ddx56Q9D0R4 Olfr1504-202ENSMUST00000209192 1514 ntAPPRIS P1 TSL 3 BASIC6.6□□□□□ -1.35
Ddx56Q9D0R4 Zfp825-203ENSMUST00000221173 1549 ntAPPRIS ALT2 TSL 3 BASIC6.6□□□□□ -1.35
Ddx56Q9D0R4 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Ddx56Q9D0R4 Gm3510-201ENSMUST00000180447 1455 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Ddx56Q9D0R4 Kcnmb2-202ENSMUST00000119970 2919 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Ddx56Q9D0R4 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Ddx56Q9D0R4 Gabrg2-203ENSMUST00000109290 2868 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Ddx56Q9D0R4 Pkd1l3-202ENSMUST00000109242 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Ddx56Q9D0R4 Mylk4-201ENSMUST00000057428 5571 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Ddx56Q9D0R4 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC6.6□□□□□ -1.35
Ddx56Q9D0R4 Olfr537-ps1-201ENSMUST00000209871 2792 ntAPPRIS P1 TSL 3 BASIC6.6□□□□□ -1.35
Ddx56Q9D0R4 Olfr1480-204ENSMUST00000207987 1804 ntTSL 3 BASIC6.6□□□□□ -1.35
Ddx56Q9D0R4 AC164107.1-202ENSMUST00000228953 1816 ntBASIC6.6□□□□□ -1.35
Ddx56Q9D0R4 Gm37762-201ENSMUST00000194515 3561 ntBASIC6.6□□□□□ -1.35
Ddx56Q9D0R4 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Ddx56Q9D0R4 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Ddx56Q9D0R4 Vmn1r89-207ENSMUST00000227390 1348 ntAPPRIS ALT2 BASIC6.6□□□□□ -1.35
Ddx56Q9D0R4 Hnrnpc-207ENSMUST00000227536 1301 ntBASIC6.6□□□□□ -1.35
Ddx56Q9D0R4 Gm43503-201ENSMUST00000200033 3408 ntBASIC6.6□□□□□ -1.35
Ddx56Q9D0R4 Gm12886-201ENSMUST00000106266 1149 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Ddx56Q9D0R4 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC6.6□□□□□ -1.35
Ddx56Q9D0R4 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Ddx56Q9D0R4 4930402F06Rik-201ENSMUST00000113009 1150 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Ddx56Q9D0R4 Gm14173-201ENSMUST00000117690 278 ntBASIC6.6□□□□□ -1.35
Ddx56Q9D0R4 4930503H13Rik-201ENSMUST00000118320 725 ntBASIC6.6□□□□□ -1.35
Ddx56Q9D0R4 Gm13338-201ENSMUST00000120235 361 ntBASIC6.6□□□□□ -1.35
Ddx56Q9D0R4 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC6.6□□□□□ -1.35
Ddx56Q9D0R4 Gm2986-201ENSMUST00000121603 382 ntBASIC6.6□□□□□ -1.35
Ddx56Q9D0R4 Gm4789-201ENSMUST00000121708 1216 ntBASIC6.6□□□□□ -1.35
Ddx56Q9D0R4 1700025O08Rik-201ENSMUST00000123729 456 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Ddx56Q9D0R4 Vmn1r208-201ENSMUST00000124841 927 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Ddx56Q9D0R4 Mageb6-ps-201ENSMUST00000126612 1032 ntBASIC6.6□□□□□ -1.35
Ddx56Q9D0R4 Gm15551-201ENSMUST00000132762 535 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Ddx56Q9D0R4 Obox1-202ENSMUST00000172463 783 ntAPPRIS P1 TSL 3 BASIC6.6□□□□□ -1.35
Ddx56Q9D0R4 Gm26804-201ENSMUST00000181248 1017 ntTSL 5 BASIC6.6□□□□□ -1.35
Ddx56Q9D0R4 Gm27715-201ENSMUST00000184714 260 ntBASIC6.6□□□□□ -1.35
Ddx56Q9D0R4 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC6.6□□□□□ -1.35
Ddx56Q9D0R4 AI506816-203ENSMUST00000198461 503 ntTSL 5 BASIC6.6□□□□□ -1.35
Ddx56Q9D0R4 Gm9245-201ENSMUST00000200528 983 ntBASIC6.6□□□□□ -1.35
Ddx56Q9D0R4 Clec2j-202ENSMUST00000203658 606 ntBASIC6.6□□□□□ -1.35
Ddx56Q9D0R4 Gm44243-201ENSMUST00000204323 692 ntBASIC6.6□□□□□ -1.35
Ddx56Q9D0R4 Olrf445-ps1-201ENSMUST00000204960 314 ntBASIC6.6□□□□□ -1.35
Ddx56Q9D0R4 Fxyd1-212ENSMUST00000206305 568 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Ddx56Q9D0R4 Gm45054-201ENSMUST00000206525 342 ntTSL 2 BASIC6.6□□□□□ -1.35
Ddx56Q9D0R4 Gm7351-201ENSMUST00000210745 580 ntBASIC6.6□□□□□ -1.35
Ddx56Q9D0R4 Gm45830-201ENSMUST00000212945 344 ntTSL 5 BASIC6.6□□□□□ -1.35
Ddx56Q9D0R4 AC123835.1-201ENSMUST00000214362 670 ntBASIC6.6□□□□□ -1.35
Ddx56Q9D0R4 Gm18863-201ENSMUST00000217004 1299 ntBASIC6.6□□□□□ -1.35
Ddx56Q9D0R4 Gm30933-201ENSMUST00000217174 381 ntTSL 2 BASIC6.6□□□□□ -1.35
Ddx56Q9D0R4 Gm5176-201ENSMUST00000218244 1227 ntBASIC6.6□□□□□ -1.35
Ddx56Q9D0R4 AC167013.2-202ENSMUST00000227035 333 ntBASIC6.6□□□□□ -1.35
Ddx56Q9D0R4 AC105324.1-201ENSMUST00000227844 386 ntBASIC6.6□□□□□ -1.35
Ddx56Q9D0R4 CT025525.3-201ENSMUST00000228858 366 ntBASIC6.6□□□□□ -1.35
Ddx56Q9D0R4 Olfr796-201ENSMUST00000037071 933 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Ddx56Q9D0R4 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Ddx56Q9D0R4 Olfr697-201ENSMUST00000050541 1047 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Ddx56Q9D0R4 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Ddx56Q9D0R4 Olfr847-201ENSMUST00000079620 939 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Ddx56Q9D0R4 Olfr1079-201ENSMUST00000099882 948 ntAPPRIS P2 BASIC6.6□□□□□ -1.35
Ddx56Q9D0R4 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Ddx56Q9D0R4 Kmt2c-201ENSMUST00000045291 14967 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Ddx56Q9D0R4 Pde4b-207ENSMUST00000106908 4304 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Ddx56Q9D0R4 Aspn-201ENSMUST00000021820 2310 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Ddx56Q9D0R4 Rnf145-202ENSMUST00000101327 4214 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Ddx56Q9D0R4 B3gnt5-203ENSMUST00000121344 4175 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Ddx56Q9D0R4 Fap-209ENSMUST00000174448 2271 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Ddx56Q9D0R4 Vmn2r97-201ENSMUST00000168710 2586 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Ddx56Q9D0R4 Ect2-202ENSMUST00000108298 4024 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Ddx56Q9D0R4 Sult1c2-201ENSMUST00000023886 1846 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Ddx56Q9D0R4 Gm27013-202ENSMUST00000205067 1436 ntBASIC6.59□□□□□ -1.35
Ddx56Q9D0R4 Tmem156-204ENSMUST00000212080 1411 ntAPPRIS P5 TSL 5 BASIC6.59□□□□□ -1.35
Ddx56Q9D0R4 Tenm4-203ENSMUST00000107166 13172 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Ddx56Q9D0R4 Gm3149-202ENSMUST00000171810 1759 ntAPPRIS P5 TSL 5 BASIC6.59□□□□□ -1.35
Ddx56Q9D0R4 AC131720.1-201ENSMUST00000218629 2132 ntBASIC6.59□□□□□ -1.35
Ddx56Q9D0R4 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
Ddx56Q9D0R4 Gm38277-201ENSMUST00000195172 1367 ntBASIC6.59□□□□□ -1.35
Ddx56Q9D0R4 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ddx56Q9D0R4 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC6.59□□□□□ -1.35
Ddx56Q9D0R4 BC055402-201ENSMUST00000190488 3301 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Ddx56Q9D0R4 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Ddx56Q9D0R4 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ddx56Q9D0R4 Plcb4-202ENSMUST00000110109 5217 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ddx56Q9D0R4 Dock7-205ENSMUST00000127417 6796 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
Ddx56Q9D0R4 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ddx56Q9D0R4 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Ddx56Q9D0R4 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC6.59□□□□□ -1.35
Ddx56Q9D0R4 Gm13193-201ENSMUST00000117275 225 ntBASIC6.59□□□□□ -1.35
Ddx56Q9D0R4 Gm7494-201ENSMUST00000121248 441 ntBASIC6.59□□□□□ -1.35
Ddx56Q9D0R4 Sms-ps-201ENSMUST00000121773 1101 ntBASIC6.59□□□□□ -1.35
Ddx56Q9D0R4 Gm12094-201ENSMUST00000121781 472 ntBASIC6.59□□□□□ -1.35
Ddx56Q9D0R4 Gm11364-201ENSMUST00000137593 297 ntTSL 5 BASIC6.59□□□□□ -1.35
Ddx56Q9D0R4 Gm12504-202ENSMUST00000148026 306 ntBASIC6.59□□□□□ -1.35
Ddx56Q9D0R4 Gm15642-201ENSMUST00000148057 311 ntTSL 5 BASIC6.59□□□□□ -1.35
Ddx56Q9D0R4 Gm8356-202ENSMUST00000164917 984 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
Ddx56Q9D0R4 Mir5107-201ENSMUST00000175586 88 ntBASIC6.59□□□□□ -1.35
Ddx56Q9D0R4 Gm20795-201ENSMUST00000178528 699 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Ddx56Q9D0R4 Vis1-201ENSMUST00000183957 201 ntBASIC6.59□□□□□ -1.35
Ddx56Q9D0R4 Spata17-208ENSMUST00000184543 667 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Ddx56Q9D0R4 Gm28967-201ENSMUST00000187351 281 ntBASIC6.59□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms