Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Gm37186-201ENSMUST00000195629 2861 ntBASIC6.24□□□□□ -1.41
Trim8Q99PJ2 Aox3-201ENSMUST00000040999 4606 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Trim8Q99PJ2 AC160029.1-201ENSMUST00000219628 2678 ntBASIC6.24□□□□□ -1.41
Trim8Q99PJ2 Ugt2a1-201ENSMUST00000147854 2570 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Trim8Q99PJ2 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC6.24□□□□□ -1.41
Trim8Q99PJ2 Olfr127-202ENSMUST00000217223 3733 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Trim8Q99PJ2 Olfr204-202ENSMUST00000216261 5371 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
Trim8Q99PJ2 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Trim8Q99PJ2 Gm22256-201ENSMUST00000102291 107 ntBASIC6.24□□□□□ -1.41
Trim8Q99PJ2 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC6.24□□□□□ -1.41
Trim8Q99PJ2 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC6.24□□□□□ -1.41
Trim8Q99PJ2 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC6.24□□□□□ -1.41
Trim8Q99PJ2 Gm7821-201ENSMUST00000117111 788 ntBASIC6.24□□□□□ -1.41
Trim8Q99PJ2 Gm14554-201ENSMUST00000119548 661 ntBASIC6.24□□□□□ -1.41
Trim8Q99PJ2 Llph-ps1-201ENSMUST00000121281 390 ntBASIC6.24□□□□□ -1.41
Trim8Q99PJ2 Gm26254-201ENSMUST00000122491 118 ntBASIC6.24□□□□□ -1.41
Trim8Q99PJ2 Gm16224-201ENSMUST00000127711 412 ntTSL 3 BASIC6.24□□□□□ -1.41
Trim8Q99PJ2 Gm13982-201ENSMUST00000138372 755 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Trim8Q99PJ2 1700086P04Rik-201ENSMUST00000149472 1009 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Trim8Q99PJ2 Gm4997-201ENSMUST00000154056 360 ntBASIC6.24□□□□□ -1.41
Trim8Q99PJ2 Gm25395-201ENSMUST00000157343 272 ntBASIC6.24□□□□□ -1.41
Trim8Q99PJ2 Gm2959-201ENSMUST00000169844 621 ntBASIC6.24□□□□□ -1.41
Trim8Q99PJ2 Polr2k-202ENSMUST00000180159 489 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Trim8Q99PJ2 Mir7685-201ENSMUST00000183555 62 ntBASIC6.24□□□□□ -1.41
Trim8Q99PJ2 Gm27817-201ENSMUST00000184302 233 ntBASIC6.24□□□□□ -1.41
Trim8Q99PJ2 Gm27636-201ENSMUST00000184528 122 ntBASIC6.24□□□□□ -1.41
Trim8Q99PJ2 1700109I08Rik-201ENSMUST00000185680 396 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Trim8Q99PJ2 Gm29513-201ENSMUST00000185741 202 ntBASIC6.24□□□□□ -1.41
Trim8Q99PJ2 Gm21718-202ENSMUST00000186974 817 ntTSL 5 BASIC6.24□□□□□ -1.41
Trim8Q99PJ2 Gm38333-201ENSMUST00000193608 604 ntBASIC6.24□□□□□ -1.41
Trim8Q99PJ2 Gm43383-201ENSMUST00000195981 469 ntBASIC6.24□□□□□ -1.41
Trim8Q99PJ2 1700042D02Rik-201ENSMUST00000198232 389 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Trim8Q99PJ2 Gm42504-201ENSMUST00000198312 525 ntTSL 3 BASIC6.24□□□□□ -1.41
Trim8Q99PJ2 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC6.24□□□□□ -1.41
Trim8Q99PJ2 1700051K13Rik-201ENSMUST00000204426 696 ntBASIC6.24□□□□□ -1.41
Trim8Q99PJ2 Gm44079-201ENSMUST00000204889 529 ntTSL 5 BASIC6.24□□□□□ -1.41
Trim8Q99PJ2 Gm7499-201ENSMUST00000210423 813 ntBASIC6.24□□□□□ -1.41
Trim8Q99PJ2 Gm8748-201ENSMUST00000211125 587 ntBASIC6.24□□□□□ -1.41
Trim8Q99PJ2 Gm45240-201ENSMUST00000211437 674 ntBASIC6.24□□□□□ -1.41
Trim8Q99PJ2 AC153566.2-201ENSMUST00000213841 330 ntTSL 5 BASIC6.24□□□□□ -1.41
Trim8Q99PJ2 AC161426.1-201ENSMUST00000214137 286 ntBASIC6.24□□□□□ -1.41
Trim8Q99PJ2 AC155709.1-201ENSMUST00000218794 162 ntBASIC6.24□□□□□ -1.41
Trim8Q99PJ2 AC153526.1-201ENSMUST00000219750 190 ntBASIC6.24□□□□□ -1.41
Trim8Q99PJ2 AC159622.1-201ENSMUST00000221004 554 ntBASIC6.24□□□□□ -1.41
Trim8Q99PJ2 Gm3333-202ENSMUST00000221763 1044 ntBASIC6.24□□□□□ -1.41
Trim8Q99PJ2 AC154558.1-201ENSMUST00000222278 415 ntBASIC6.24□□□□□ -1.41
Trim8Q99PJ2 AC161586.1-201ENSMUST00000223232 547 ntBASIC6.24□□□□□ -1.41
Trim8Q99PJ2 CT030645.3-201ENSMUST00000225483 1022 ntBASIC6.24□□□□□ -1.41
Trim8Q99PJ2 Vmn1r89-206ENSMUST00000227319 985 ntBASIC6.24□□□□□ -1.41
Trim8Q99PJ2 AC122459.3-201ENSMUST00000228508 1042 ntBASIC6.24□□□□□ -1.41
Trim8Q99PJ2 Olfr299-201ENSMUST00000057734 993 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Trim8Q99PJ2 Gm7808-201ENSMUST00000082002 387 ntBASIC6.24□□□□□ -1.41
Trim8Q99PJ2 Gm94-201ENSMUST00000096570 748 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Trim8Q99PJ2 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC6.24□□□□□ -1.41
Trim8Q99PJ2 Olfr1217-201ENSMUST00000099799 1105 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Trim8Q99PJ2 Olfr1105-201ENSMUST00000099868 939 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Trim8Q99PJ2 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC6.24□□□□□ -1.41
Trim8Q99PJ2 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC6.24□□□□□ -1.41
Trim8Q99PJ2 Gm17056-201ENSMUST00000164804 2299 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Trim8Q99PJ2 Gm42510-201ENSMUST00000196470 2258 ntBASIC6.24□□□□□ -1.41
Trim8Q99PJ2 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
Trim8Q99PJ2 Fgf14-202ENSMUST00000095529 3608 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Trim8Q99PJ2 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Trim8Q99PJ2 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Trim8Q99PJ2 4933405O20Rik-201ENSMUST00000119710 1341 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Trim8Q99PJ2 Olfr1381-202ENSMUST00000213256 4954 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Trim8Q99PJ2 Ano5-202ENSMUST00000207044 3311 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Trim8Q99PJ2 Kars-ps1-201ENSMUST00000122077 1767 ntBASIC6.23□□□□□ -1.41
Trim8Q99PJ2 Gulp1-206ENSMUST00000162600 2798 ntTSL 5 BASIC6.23□□□□□ -1.41
Trim8Q99PJ2 AC124680.1-201ENSMUST00000223923 1585 ntBASIC6.23□□□□□ -1.41
Trim8Q99PJ2 Gm44440-201ENSMUST00000203139 2373 ntBASIC6.23□□□□□ -1.41
Trim8Q99PJ2 Ect2-203ENSMUST00000108300 4086 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Trim8Q99PJ2 Ndufaf4-201ENSMUST00000029925 3632 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Trim8Q99PJ2 Gm28407-201ENSMUST00000185630 1497 ntTSL 5 BASIC6.23□□□□□ -1.41
Trim8Q99PJ2 Gm28108-201ENSMUST00000186747 1497 ntTSL 5 BASIC6.23□□□□□ -1.41
Trim8Q99PJ2 Gm28218-202ENSMUST00000186782 1498 ntTSL 5 BASIC6.23□□□□□ -1.41
Trim8Q99PJ2 Gm29511-201ENSMUST00000187580 1497 ntTSL 5 BASIC6.23□□□□□ -1.41
Trim8Q99PJ2 Gm28367-201ENSMUST00000187942 1496 ntTSL 5 BASIC6.23□□□□□ -1.41
Trim8Q99PJ2 Gm29549-202ENSMUST00000189569 1497 ntTSL 5 BASIC6.23□□□□□ -1.41
Trim8Q99PJ2 AC130831.1-201ENSMUST00000224546 1474 ntBASIC6.23□□□□□ -1.41
Trim8Q99PJ2 Hbp1-201ENSMUST00000167458 2733 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Trim8Q99PJ2 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Trim8Q99PJ2 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Trim8Q99PJ2 1700011H14Rik-205ENSMUST00000228936 3444 ntAPPRIS P2 BASIC6.23□□□□□ -1.41
Trim8Q99PJ2 Zfp758-202ENSMUST00000088765 2973 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
Trim8Q99PJ2 Awat1-201ENSMUST00000096361 1390 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Trim8Q99PJ2 Mcf2-201ENSMUST00000033478 3659 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Trim8Q99PJ2 AC153144.1-201ENSMUST00000221759 3139 ntBASIC6.23□□□□□ -1.41
Trim8Q99PJ2 Gm12874-201ENSMUST00000117190 913 ntBASIC6.23□□□□□ -1.41
Trim8Q99PJ2 Gm12135-201ENSMUST00000119170 466 ntBASIC6.23□□□□□ -1.41
Trim8Q99PJ2 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC6.23□□□□□ -1.41
Trim8Q99PJ2 Vamp7-ps-201ENSMUST00000120334 655 ntBASIC6.23□□□□□ -1.41
Trim8Q99PJ2 Gm7746-201ENSMUST00000120966 503 ntBASIC6.23□□□□□ -1.41
Trim8Q99PJ2 Gm23888-201ENSMUST00000122690 253 ntBASIC6.23□□□□□ -1.41
Trim8Q99PJ2 4930419G24Rik-201ENSMUST00000125494 1058 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Trim8Q99PJ2 Gm12526-201ENSMUST00000154462 615 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Trim8Q99PJ2 4930445N08Rik-201ENSMUST00000156925 313 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Trim8Q99PJ2 Gm25989-201ENSMUST00000158761 133 ntBASIC6.23□□□□□ -1.41
Trim8Q99PJ2 G930045G22Rik-202ENSMUST00000161723 673 ntTSL 3 BASIC6.23□□□□□ -1.41
Trim8Q99PJ2 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC6.23□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 89.7 ms