Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
Cdk5rap3Q99LM2 Cyp4a32-201ENSMUST00000084342 1530 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Cdk5rap3Q99LM2 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC6.01□□□□□ -1.45
Cdk5rap3Q99LM2 AC124569.3-201ENSMUST00000224860 1621 ntBASIC6.01□□□□□ -1.45
Cdk5rap3Q99LM2 Flrt2-201ENSMUST00000057324 7099 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Cdk5rap3Q99LM2 AC122355.1-201ENSMUST00000228155 4184 ntBASIC6.01□□□□□ -1.45
Cdk5rap3Q99LM2 Gm25795-201ENSMUST00000104421 132 ntBASIC6.01□□□□□ -1.45
Cdk5rap3Q99LM2 Gm12643-201ENSMUST00000116078 374 ntBASIC6.01□□□□□ -1.45
Cdk5rap3Q99LM2 Klra5-202ENSMUST00000118060 1279 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Cdk5rap3Q99LM2 Rps12-ps1-201ENSMUST00000121980 401 ntBASIC6.01□□□□□ -1.45
Cdk5rap3Q99LM2 Klra5-201ENSMUST00000014683 1147 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Cdk5rap3Q99LM2 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Cdk5rap3Q99LM2 Vmn1r175-201ENSMUST00000166141 915 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Cdk5rap3Q99LM2 Vmn1r9-201ENSMUST00000171186 1051 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Cdk5rap3Q99LM2 Gm5218-201ENSMUST00000172270 465 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Cdk5rap3Q99LM2 Gm18808-201ENSMUST00000173316 462 ntBASIC6.01□□□□□ -1.45
Cdk5rap3Q99LM2 Gm3500-202ENSMUST00000178058 609 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Cdk5rap3Q99LM2 Gm26923-201ENSMUST00000182615 996 ntBASIC6.01□□□□□ -1.45
Cdk5rap3Q99LM2 Scgb1b21-202ENSMUST00000182901 278 ntTSL 5 BASIC6.01□□□□□ -1.45
Cdk5rap3Q99LM2 Scgb1b4-ps-201ENSMUST00000186920 271 ntBASIC6.01□□□□□ -1.45
Cdk5rap3Q99LM2 Gm2367-201ENSMUST00000192374 472 ntBASIC6.01□□□□□ -1.45
Cdk5rap3Q99LM2 Gm37809-201ENSMUST00000195050 931 ntBASIC6.01□□□□□ -1.45
Cdk5rap3Q99LM2 Gm43391-203ENSMUST00000198110 1001 ntTSL 5 BASIC6.01□□□□□ -1.45
Cdk5rap3Q99LM2 Usf2-ps1-201ENSMUST00000206657 311 ntBASIC6.01□□□□□ -1.45
Cdk5rap3Q99LM2 Gm44840-201ENSMUST00000208983 1168 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Cdk5rap3Q99LM2 Olfr563-ps1-201ENSMUST00000210909 873 ntBASIC6.01□□□□□ -1.45
Cdk5rap3Q99LM2 Gm8523-201ENSMUST00000211386 552 ntBASIC6.01□□□□□ -1.45
Cdk5rap3Q99LM2 Gm45823-201ENSMUST00000212714 515 ntTSL 5 BASIC6.01□□□□□ -1.45
Cdk5rap3Q99LM2 AC133203.2-201ENSMUST00000226709 464 ntBASIC6.01□□□□□ -1.45
Cdk5rap3Q99LM2 AC166105.1-201ENSMUST00000227512 482 ntBASIC6.01□□□□□ -1.45
Cdk5rap3Q99LM2 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC6.01□□□□□ -1.45
Cdk5rap3Q99LM2 Defa26-201ENSMUST00000074343 372 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Cdk5rap3Q99LM2 Slc38a4-201ENSMUST00000023101 3932 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Cdk5rap3Q99LM2 Olfr350-203ENSMUST00000215100 2086 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Cdk5rap3Q99LM2 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Cdk5rap3Q99LM2 Ceacam12-202ENSMUST00000108483 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Cdk5rap3Q99LM2 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Cdk5rap3Q99LM2 Zfhx4-201ENSMUST00000026284 13874 ntAPPRIS P2 TSL 5 BASIC6.01□□□□□ -1.45
Cdk5rap3Q99LM2 Svs2-202ENSMUST00000109374 1479 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Cdk5rap3Q99LM2 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Cdk5rap3Q99LM2 Pate2-202ENSMUST00000118254 2215 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Cdk5rap3Q99LM2 S100pbp-201ENSMUST00000049081 2769 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Cdk5rap3Q99LM2 AC121844.3-201ENSMUST00000219124 1785 ntBASIC6.01□□□□□ -1.45
Cdk5rap3Q99LM2 Zfp59-202ENSMUST00000205701 3437 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Cdk5rap3Q99LM2 Ehf-202ENSMUST00000111174 1307 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Cdk5rap3Q99LM2 Gm4973-201ENSMUST00000206925 1334 ntBASIC6□□□□□ -1.45
Cdk5rap3Q99LM2 Gm43887-201ENSMUST00000204727 3186 ntBASIC6□□□□□ -1.45
Cdk5rap3Q99LM2 Il1rl2-204ENSMUST00000194296 3908 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Cdk5rap3Q99LM2 Cd96-201ENSMUST00000023336 2184 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Cdk5rap3Q99LM2 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC6□□□□□ -1.45
Cdk5rap3Q99LM2 Dcun1d1-203ENSMUST00000178098 4434 ntTSL 5 BASIC6□□□□□ -1.45
Cdk5rap3Q99LM2 Zfp148-ps1-201ENSMUST00000211201 2453 ntBASIC6□□□□□ -1.45
Cdk5rap3Q99LM2 Tor1aip2-203ENSMUST00000097526 2589 ntTSL 1 (best) BASIC6□□□□□ -1.45
Cdk5rap3Q99LM2 Pik3c2g-202ENSMUST00000087657 3303 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Cdk5rap3Q99LM2 Gm25345-201ENSMUST00000104505 133 ntBASIC6□□□□□ -1.45
Cdk5rap3Q99LM2 Snora35-201ENSMUST00000104579 128 ntBASIC6□□□□□ -1.45
Cdk5rap3Q99LM2 Gm13768-201ENSMUST00000116469 929 ntBASIC6□□□□□ -1.45
Cdk5rap3Q99LM2 Gm13641-201ENSMUST00000117993 473 ntBASIC6□□□□□ -1.45
Cdk5rap3Q99LM2 Gm14970-201ENSMUST00000122289 355 ntBASIC6□□□□□ -1.45
Cdk5rap3Q99LM2 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC6□□□□□ -1.45
Cdk5rap3Q99LM2 Gm11292-201ENSMUST00000146121 1153 ntTSL 1 (best) BASIC6□□□□□ -1.45
Cdk5rap3Q99LM2 Mipepos-201ENSMUST00000155855 610 ntTSL 3 BASIC6□□□□□ -1.45
Cdk5rap3Q99LM2 Gm25219-201ENSMUST00000157545 330 ntBASIC6□□□□□ -1.45
Cdk5rap3Q99LM2 Gm25048-201ENSMUST00000158598 91 ntBASIC6□□□□□ -1.45
Cdk5rap3Q99LM2 Gm22116-201ENSMUST00000158791 141 ntBASIC6□□□□□ -1.45
Cdk5rap3Q99LM2 Gm16297-201ENSMUST00000161466 459 ntBASIC6□□□□□ -1.45
Cdk5rap3Q99LM2 Gm21999-201ENSMUST00000165985 387 ntBASIC6□□□□□ -1.45
Cdk5rap3Q99LM2 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC6□□□□□ -1.45
Cdk5rap3Q99LM2 Gm18558-201ENSMUST00000186253 1214 ntBASIC6□□□□□ -1.45
Cdk5rap3Q99LM2 Stk-ps2-204ENSMUST00000187808 616 ntBASIC6□□□□□ -1.45
Cdk5rap3Q99LM2 Gm28507-201ENSMUST00000189737 703 ntBASIC6□□□□□ -1.45
Cdk5rap3Q99LM2 4930532M18Rik-202ENSMUST00000190980 534 ntTSL 3 BASIC6□□□□□ -1.45
Cdk5rap3Q99LM2 Gm18444-201ENSMUST00000191239 629 ntBASIC6□□□□□ -1.45
Cdk5rap3Q99LM2 Gm18865-201ENSMUST00000193011 1171 ntBASIC6□□□□□ -1.45
Cdk5rap3Q99LM2 Ighv8-5-201ENSMUST00000194257 358 ntAPPRIS P1 BASIC6□□□□□ -1.45
Cdk5rap3Q99LM2 9530003J23Rik-201ENSMUST00000020392 1233 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Cdk5rap3Q99LM2 1700093K21Rik-201ENSMUST00000020527 1030 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Cdk5rap3Q99LM2 Gm45044-201ENSMUST00000208078 396 ntTSL 5 BASIC6□□□□□ -1.45
Cdk5rap3Q99LM2 CT485612.1-201ENSMUST00000222555 382 ntBASIC6□□□□□ -1.45
Cdk5rap3Q99LM2 AC164295.1-201ENSMUST00000224861 186 ntBASIC6□□□□□ -1.45
Cdk5rap3Q99LM2 CT025686.1-201ENSMUST00000227592 438 ntBASIC6□□□□□ -1.45
Cdk5rap3Q99LM2 CT025523.1-201ENSMUST00000228318 694 ntBASIC6□□□□□ -1.45
Cdk5rap3Q99LM2 Gm24919-201ENSMUST00000083020 106 ntBASIC6□□□□□ -1.45
Cdk5rap3Q99LM2 Mir365-2-201ENSMUST00000083555 112 ntBASIC6□□□□□ -1.45
Cdk5rap3Q99LM2 Fam183b-202ENSMUST00000094156 567 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Cdk5rap3Q99LM2 Trim6-201ENSMUST00000098180 3827 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Cdk5rap3Q99LM2 Serpinb3b-201ENSMUST00000086694 1653 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Cdk5rap3Q99LM2 AC152944.1-201ENSMUST00000220160 3101 ntBASIC6□□□□□ -1.45
Cdk5rap3Q99LM2 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC6□□□□□ -1.45
Cdk5rap3Q99LM2 AC132852.2-201ENSMUST00000216052 2794 ntBASIC6□□□□□ -1.45
Cdk5rap3Q99LM2 Fastkd1-201ENSMUST00000073152 2865 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
Cdk5rap3Q99LM2 Gm44886-201ENSMUST00000209009 1304 ntTSL 5 BASIC5.99□□□□□ -1.45
Cdk5rap3Q99LM2 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC5.99□□□□□ -1.45
Cdk5rap3Q99LM2 Gm37677-201ENSMUST00000194520 7634 ntBASIC5.99□□□□□ -1.45
Cdk5rap3Q99LM2 Gm21093-201ENSMUST00000084677 1710 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Cdk5rap3Q99LM2 Pls3-203ENSMUST00000114058 3032 ntTSL 5 BASIC5.99□□□□□ -1.45
Cdk5rap3Q99LM2 Gm43169-201ENSMUST00000199544 4734 ntBASIC5.99□□□□□ -1.45
Cdk5rap3Q99LM2 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC5.99□□□□□ -1.45
Cdk5rap3Q99LM2 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC5.99□□□□□ -1.45
Cdk5rap3Q99LM2 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms