Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Clrn1Q8K445 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Clrn1Q8K445 Gbp10-201ENSMUST00000065588 3528 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Clrn1Q8K445 Pik3c2a-204ENSMUST00000206219 5670 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Clrn1Q8K445 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
Clrn1Q8K445 Gm29274-202ENSMUST00000188814 1498 ntTSL 5 BASIC6.02□□□□□ -1.44
Clrn1Q8K445 Gm43961-201ENSMUST00000203289 1872 ntBASIC6.02□□□□□ -1.44
Clrn1Q8K445 Gm38156-201ENSMUST00000194601 2260 ntBASIC6.02□□□□□ -1.44
Clrn1Q8K445 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Clrn1Q8K445 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Clrn1Q8K445 4922502D21Rik-201ENSMUST00000051283 1582 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Clrn1Q8K445 Tex11-201ENSMUST00000009814 3250 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
Clrn1Q8K445 Tnfsf10-201ENSMUST00000046383 4993 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Clrn1Q8K445 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
Clrn1Q8K445 Gm4787-201ENSMUST00000062182 2474 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Clrn1Q8K445 Sulf1-202ENSMUST00000177608 5598 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Clrn1Q8K445 Vamp4-207ENSMUST00000155003 1428 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.45
Clrn1Q8K445 Lrrc3b-202ENSMUST00000163937 1424 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Clrn1Q8K445 Olfr726-207ENSMUST00000217319 1419 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Clrn1Q8K445 Usp17lb-201ENSMUST00000076501 1407 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Clrn1Q8K445 B3gnt5-201ENSMUST00000079780 4258 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Clrn1Q8K445 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Clrn1Q8K445 C630043F03Rik-201ENSMUST00000122923 2581 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Clrn1Q8K445 A2m-201ENSMUST00000032203 4605 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Clrn1Q8K445 Gm46348-201ENSMUST00000222917 2151 ntTSL 5 BASIC6.02□□□□□ -1.45
Clrn1Q8K445 Olfr1023-202ENSMUST00000213441 4740 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Clrn1Q8K445 Ighv1-19-201ENSMUST00000103505 348 ntAPPRIS ALT2 BASIC6.02□□□□□ -1.45
Clrn1Q8K445 Macrod2-203ENSMUST00000110061 887 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Clrn1Q8K445 Gm14007-201ENSMUST00000118288 210 ntBASIC6.02□□□□□ -1.45
Clrn1Q8K445 Vmn1r-ps100-201ENSMUST00000120610 867 ntBASIC6.02□□□□□ -1.45
Clrn1Q8K445 Gm11896-201ENSMUST00000121105 820 ntBASIC6.02□□□□□ -1.45
Clrn1Q8K445 Gm10658-201ENSMUST00000128125 1241 ntTSL 2 BASIC6.02□□□□□ -1.45
Clrn1Q8K445 4930587A21Rik-201ENSMUST00000128588 851 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Clrn1Q8K445 Gm13166-203ENSMUST00000144166 326 ntTSL 3 BASIC6.02□□□□□ -1.45
Clrn1Q8K445 Serpina3d-ps-201ENSMUST00000163110 1272 ntBASIC6.02□□□□□ -1.45
Clrn1Q8K445 Speer1-201ENSMUST00000172106 1123 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Clrn1Q8K445 Gm20637-201ENSMUST00000175715 462 ntBASIC6.02□□□□□ -1.45
Clrn1Q8K445 1700006E09Rik-203ENSMUST00000176722 608 ntTSL 3 BASIC6.02□□□□□ -1.45
Clrn1Q8K445 Gm7976-201ENSMUST00000181507 1242 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Clrn1Q8K445 Mrgpra14-201ENSMUST00000189782 913 ntBASIC6.02□□□□□ -1.45
Clrn1Q8K445 Gm29605-201ENSMUST00000190800 292 ntBASIC6.02□□□□□ -1.45
Clrn1Q8K445 4930558C23Rik-201ENSMUST00000196239 731 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Clrn1Q8K445 Gm35212-201ENSMUST00000196672 606 ntBASIC6.02□□□□□ -1.45
Clrn1Q8K445 Tshb-205ENSMUST00000197322 476 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Clrn1Q8K445 Gm44361-201ENSMUST00000197960 94 ntBASIC6.02□□□□□ -1.45
Clrn1Q8K445 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC6.02□□□□□ -1.45
Clrn1Q8K445 Gm43241-201ENSMUST00000198375 364 ntTSL 3 BASIC6.02□□□□□ -1.45
Clrn1Q8K445 Gm19104-201ENSMUST00000198392 679 ntBASIC6.02□□□□□ -1.45
Clrn1Q8K445 5033403H07Rik-203ENSMUST00000198580 467 ntTSL 2 BASIC6.02□□□□□ -1.45
Clrn1Q8K445 Gm8035-201ENSMUST00000204625 687 ntBASIC6.02□□□□□ -1.45
Clrn1Q8K445 Gm44686-201ENSMUST00000206776 540 ntTSL 3 BASIC6.02□□□□□ -1.45
Clrn1Q8K445 Gm45064-201ENSMUST00000208619 443 ntTSL 5 BASIC6.02□□□□□ -1.45
Clrn1Q8K445 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC6.02□□□□□ -1.45
Clrn1Q8K445 Gm7351-201ENSMUST00000210745 580 ntBASIC6.02□□□□□ -1.45
Clrn1Q8K445 Olfr850-202ENSMUST00000211832 947 ntAPPRIS ALT2 BASIC6.02□□□□□ -1.45
Clrn1Q8K445 Frg1-201ENSMUST00000033999 1039 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Clrn1Q8K445 Olfr730-201ENSMUST00000051453 957 ntAPPRIS P2 BASIC6.02□□□□□ -1.45
Clrn1Q8K445 Platr26-201ENSMUST00000079720 641 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Clrn1Q8K445 Vmn1r52-201ENSMUST00000079832 930 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Clrn1Q8K445 Scgb1b2-201ENSMUST00000080635 424 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Clrn1Q8K445 n-R5s196-201ENSMUST00000083136 117 ntBASIC6.02□□□□□ -1.45
Clrn1Q8K445 Cast-210ENSMUST00000223126 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Clrn1Q8K445 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Clrn1Q8K445 Synrg-208ENSMUST00000183714 3651 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Clrn1Q8K445 Gm3139-203ENSMUST00000202642 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Clrn1Q8K445 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Clrn1Q8K445 Gm10845-202ENSMUST00000228217 3389 ntBASIC6.02□□□□□ -1.45
Clrn1Q8K445 Ptpn22-201ENSMUST00000029433 2743 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Clrn1Q8K445 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Clrn1Q8K445 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Clrn1Q8K445 Vmn2r-ps44-201ENSMUST00000174053 2412 ntBASIC6.01□□□□□ -1.45
Clrn1Q8K445 Gm9403-201ENSMUST00000196299 2181 ntBASIC6.01□□□□□ -1.45
Clrn1Q8K445 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC6.01□□□□□ -1.45
Clrn1Q8K445 Zscan4b-201ENSMUST00000168158 1754 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Clrn1Q8K445 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Clrn1Q8K445 Gm38026-201ENSMUST00000193284 3880 ntBASIC6.01□□□□□ -1.45
Clrn1Q8K445 Olfr1239-203ENSMUST00000217181 1516 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Clrn1Q8K445 Olfr1474-203ENSMUST00000220113 1539 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Clrn1Q8K445 Gm37780-201ENSMUST00000194117 1873 ntBASIC6.01□□□□□ -1.45
Clrn1Q8K445 4930431P03Rik-204ENSMUST00000228169 1967 ntBASIC6.01□□□□□ -1.45
Clrn1Q8K445 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Clrn1Q8K445 Gm26340-201ENSMUST00000102365 99 ntBASIC6.01□□□□□ -1.45
Clrn1Q8K445 Ighv1-31-201ENSMUST00000103511 294 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Clrn1Q8K445 Ighv1-42-201ENSMUST00000103516 294 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Clrn1Q8K445 Ighv1-43-201ENSMUST00000103517 294 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Clrn1Q8K445 Ighv1-66-201ENSMUST00000103537 399 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Clrn1Q8K445 Ighv1-75-201ENSMUST00000103544 373 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Clrn1Q8K445 Gm24989-201ENSMUST00000104461 88 ntBASIC6.01□□□□□ -1.45
Clrn1Q8K445 Olfr26-201ENSMUST00000104874 931 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Clrn1Q8K445 Cd59b-202ENSMUST00000111130 706 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Clrn1Q8K445 Gm14786-201ENSMUST00000117127 944 ntBASIC6.01□□□□□ -1.45
Clrn1Q8K445 Gm12874-201ENSMUST00000117190 913 ntBASIC6.01□□□□□ -1.45
Clrn1Q8K445 Gm12939-201ENSMUST00000117303 165 ntBASIC6.01□□□□□ -1.45
Clrn1Q8K445 Gm14531-201ENSMUST00000120845 285 ntBASIC6.01□□□□□ -1.45
Clrn1Q8K445 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC6.01□□□□□ -1.45
Clrn1Q8K445 Gm7494-201ENSMUST00000121248 441 ntBASIC6.01□□□□□ -1.45
Clrn1Q8K445 Rpl5-ps1-201ENSMUST00000121367 894 ntBASIC6.01□□□□□ -1.45
Clrn1Q8K445 Gm11965-201ENSMUST00000122017 277 ntBASIC6.01□□□□□ -1.45
Clrn1Q8K445 Gm4764-201ENSMUST00000130207 1233 ntBASIC6.01□□□□□ -1.45
Clrn1Q8K445 Gm7437-201ENSMUST00000156744 661 ntTSL 2 BASIC6.01□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms