Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
CopaQ8CIE6 Gm28358-201ENSMUST00000187860 636 ntTSL 5 BASIC6.25□□□□□ -1.41
CopaQ8CIE6 Gm37430-201ENSMUST00000193039 196 ntBASIC6.25□□□□□ -1.41
CopaQ8CIE6 Gm4332-201ENSMUST00000196114 346 ntBASIC6.25□□□□□ -1.41
CopaQ8CIE6 Gm29778-201ENSMUST00000201667 466 ntBASIC6.25□□□□□ -1.41
CopaQ8CIE6 1700093K21Rik-201ENSMUST00000020527 1030 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CopaQ8CIE6 Gm39384-201ENSMUST00000213703 743 ntTSL 5 BASIC6.25□□□□□ -1.41
CopaQ8CIE6 Olfr1240-201ENSMUST00000215362 1074 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
CopaQ8CIE6 AC122188.1-201ENSMUST00000217534 312 ntBASIC6.25□□□□□ -1.41
CopaQ8CIE6 AC164426.1-201ENSMUST00000225745 929 ntBASIC6.25□□□□□ -1.41
CopaQ8CIE6 AC154323.1-201ENSMUST00000228329 1231 ntBASIC6.25□□□□□ -1.41
CopaQ8CIE6 Gm4792-201ENSMUST00000065826 771 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
CopaQ8CIE6 Olfr726-201ENSMUST00000072370 966 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
CopaQ8CIE6 Bex6-201ENSMUST00000099990 764 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
CopaQ8CIE6 Tnfaip3-202ENSMUST00000105527 4334 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CopaQ8CIE6 Olfr1295-203ENSMUST00000217772 5539 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
CopaQ8CIE6 AC156031.1-201ENSMUST00000217288 2555 ntBASIC6.25□□□□□ -1.41
CopaQ8CIE6 Vwc2l-201ENSMUST00000053922 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CopaQ8CIE6 Acad11-202ENSMUST00000120854 3108 ntTSL 5 BASIC6.25□□□□□ -1.41
CopaQ8CIE6 Vmn2r3-202ENSMUST00000176328 2748 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
CopaQ8CIE6 Zfp184-205ENSMUST00000176511 2703 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CopaQ8CIE6 Klf7-202ENSMUST00000114086 7662 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CopaQ8CIE6 Olfr1166-202ENSMUST00000217575 2004 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
CopaQ8CIE6 D830032E09Rik-202ENSMUST00000189497 1632 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CopaQ8CIE6 Olfr725-202ENSMUST00000206920 1519 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
CopaQ8CIE6 Cd200r3-203ENSMUST00000114611 1407 ntAPPRIS P4 TSL 1 (best) BASIC6.25□□□□□ -1.41
CopaQ8CIE6 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CopaQ8CIE6 Ube2n-201ENSMUST00000099329 3867 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CopaQ8CIE6 Mcf2-201ENSMUST00000033478 3659 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
CopaQ8CIE6 Ncf2-202ENSMUST00000186568 3550 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CopaQ8CIE6 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CopaQ8CIE6 AC154682.1-201ENSMUST00000225871 3124 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
CopaQ8CIE6 Gm38335-201ENSMUST00000195727 1789 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CopaQ8CIE6 Gm40987-202ENSMUST00000221856 1588 ntTSL 5 BASIC6.24□□□□□ -1.41
CopaQ8CIE6 AC154841.1-201ENSMUST00000227263 1479 ntBASIC6.24□□□□□ -1.41
CopaQ8CIE6 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC6.24□□□□□ -1.41
CopaQ8CIE6 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CopaQ8CIE6 Tcrg-V7-201ENSMUST00000103553 368 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
CopaQ8CIE6 Gm22371-201ENSMUST00000104588 130 ntBASIC6.24□□□□□ -1.41
CopaQ8CIE6 Gm12073-201ENSMUST00000117382 524 ntBASIC6.24□□□□□ -1.41
CopaQ8CIE6 Spink8-201ENSMUST00000118732 637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
CopaQ8CIE6 Hspe1-ps4-201ENSMUST00000119538 286 ntBASIC6.24□□□□□ -1.41
CopaQ8CIE6 Gm8837-201ENSMUST00000161037 1107 ntBASIC6.24□□□□□ -1.41
CopaQ8CIE6 Hspe1-ps3-201ENSMUST00000172726 277 ntBASIC6.24□□□□□ -1.41
CopaQ8CIE6 Gm22923-201ENSMUST00000174952 110 ntBASIC6.24□□□□□ -1.41
CopaQ8CIE6 Gm25246-201ENSMUST00000175476 69 ntBASIC6.24□□□□□ -1.41
CopaQ8CIE6 Gm22852-201ENSMUST00000177899 101 ntBASIC6.24□□□□□ -1.41
CopaQ8CIE6 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CopaQ8CIE6 Gm5947-201ENSMUST00000179156 714 ntBASIC6.24□□□□□ -1.41
CopaQ8CIE6 Gm5645-201ENSMUST00000179597 714 ntBASIC6.24□□□□□ -1.41
CopaQ8CIE6 Gm2042-202ENSMUST00000180706 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
CopaQ8CIE6 B230110C06Rik-202ENSMUST00000181936 938 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CopaQ8CIE6 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CopaQ8CIE6 Gm27210-201ENSMUST00000184263 402 ntBASIC6.24□□□□□ -1.41
CopaQ8CIE6 Gm29519-201ENSMUST00000186994 398 ntBASIC6.24□□□□□ -1.41
CopaQ8CIE6 Gm28616-201ENSMUST00000187344 441 ntTSL 5 BASIC6.24□□□□□ -1.41
CopaQ8CIE6 Gm29359-201ENSMUST00000191007 495 ntTSL 5 BASIC6.24□□□□□ -1.41
CopaQ8CIE6 Gm8869-201ENSMUST00000195222 947 ntBASIC6.24□□□□□ -1.41
CopaQ8CIE6 Gm37908-201ENSMUST00000195828 470 ntBASIC6.24□□□□□ -1.41
CopaQ8CIE6 Gm3544-201ENSMUST00000196129 305 ntBASIC6.24□□□□□ -1.41
CopaQ8CIE6 Gm42205-201ENSMUST00000199244 804 ntTSL 3 BASIC6.24□□□□□ -1.41
CopaQ8CIE6 Gm43501-201ENSMUST00000202513 107 ntBASIC6.24□□□□□ -1.41
CopaQ8CIE6 4922502N22Rik-201ENSMUST00000204038 1149 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CopaQ8CIE6 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC6.24□□□□□ -1.41
CopaQ8CIE6 Gm38584-201ENSMUST00000207361 517 ntTSL 5 BASIC6.24□□□□□ -1.41
CopaQ8CIE6 Gm38843-201ENSMUST00000209189 323 ntTSL 5 BASIC6.24□□□□□ -1.41
CopaQ8CIE6 Gm2996-201ENSMUST00000211398 537 ntBASIC6.24□□□□□ -1.41
CopaQ8CIE6 Gm18242-201ENSMUST00000218455 542 ntBASIC6.24□□□□□ -1.41
CopaQ8CIE6 Ppp1r36-204ENSMUST00000220187 504 ntTSL 3 BASIC6.24□□□□□ -1.41
CopaQ8CIE6 4921501I09Rik-201ENSMUST00000220337 384 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CopaQ8CIE6 Gm5655-201ENSMUST00000221078 901 ntBASIC6.24□□□□□ -1.41
CopaQ8CIE6 AV026068-216ENSMUST00000223874 328 ntBASIC6.24□□□□□ -1.41
CopaQ8CIE6 CT009515.3-201ENSMUST00000226509 671 ntBASIC6.24□□□□□ -1.41
CopaQ8CIE6 Gm8256-203ENSMUST00000228692 591 ntBASIC6.24□□□□□ -1.41
CopaQ8CIE6 Tas2r109-201ENSMUST00000067539 951 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
CopaQ8CIE6 Olfr480-201ENSMUST00000071658 1029 ntBASIC6.24□□□□□ -1.41
CopaQ8CIE6 Atp12a-201ENSMUST00000007340 3950 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CopaQ8CIE6 Fam35a-206ENSMUST00000228626 3100 ntBASIC6.24□□□□□ -1.41
CopaQ8CIE6 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC6.24□□□□□ -1.41
CopaQ8CIE6 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
CopaQ8CIE6 Zfp955b-201ENSMUST00000099414 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CopaQ8CIE6 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
CopaQ8CIE6 Prg4-208ENSMUST00000164600 4263 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
CopaQ8CIE6 Gm7903-202ENSMUST00000179953 3519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
CopaQ8CIE6 Gm45838-201ENSMUST00000207355 2447 ntBASIC6.24□□□□□ -1.41
CopaQ8CIE6 Gm3453-201ENSMUST00000170686 1756 ntAPPRIS P5 TSL 5 BASIC6.23□□□□□ -1.41
CopaQ8CIE6 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC6.23□□□□□ -1.41
CopaQ8CIE6 Vmn2r97-201ENSMUST00000168710 2586 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
CopaQ8CIE6 Olfr1155-202ENSMUST00000214641 2048 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
CopaQ8CIE6 Slmap-201ENSMUST00000038522 4501 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
CopaQ8CIE6 Casp1-201ENSMUST00000027015 1497 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CopaQ8CIE6 Mttp-202ENSMUST00000098580 3072 ntTSL 5 BASIC6.23□□□□□ -1.41
CopaQ8CIE6 AC123629.1-201ENSMUST00000225669 1364 ntBASIC6.23□□□□□ -1.41
CopaQ8CIE6 Gm45424-201ENSMUST00000210575 3300 ntBASIC6.23□□□□□ -1.41
CopaQ8CIE6 Gm38142-201ENSMUST00000194093 3555 ntBASIC6.23□□□□□ -1.41
CopaQ8CIE6 F830112A20Rik-201ENSMUST00000194249 3552 ntBASIC6.23□□□□□ -1.41
CopaQ8CIE6 Gm16440-201ENSMUST00000100900 1089 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
CopaQ8CIE6 Gm25795-201ENSMUST00000104421 132 ntBASIC6.23□□□□□ -1.41
CopaQ8CIE6 Olfr1330-202ENSMUST00000105035 1027 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
CopaQ8CIE6 Foxp2-202ENSMUST00000115469 1293 ntTSL 5 BASIC6.23□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms