Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC5.91□□□□□ -1.46
Ccdc28aQ8CEI3 AC124826.1-201ENSMUST00000221651 325 ntBASIC5.91□□□□□ -1.46
Ccdc28aQ8CEI3 AC154633.1-201ENSMUST00000223276 449 ntBASIC5.91□□□□□ -1.46
Ccdc28aQ8CEI3 AC170999.2-201ENSMUST00000226223 264 ntBASIC5.91□□□□□ -1.46
Ccdc28aQ8CEI3 AC154640.3-201ENSMUST00000227492 846 ntBASIC5.91□□□□□ -1.46
Ccdc28aQ8CEI3 AC154323.1-201ENSMUST00000228329 1231 ntBASIC5.91□□□□□ -1.46
Ccdc28aQ8CEI3 Vmn1r31-205ENSMUST00000228586 2115 ntAPPRIS P2 BASIC5.91□□□□□ -1.46
Ccdc28aQ8CEI3 Samt3-201ENSMUST00000047945 1048 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Ccdc28aQ8CEI3 Olfr704-202ENSMUST00000098141 948 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Ccdc28aQ8CEI3 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Ccdc28aQ8CEI3 Olfr1386-203ENSMUST00000213674 2457 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Ccdc28aQ8CEI3 Rspry1-205ENSMUST00000211983 3397 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Ccdc28aQ8CEI3 Amy2a5-201ENSMUST00000098673 3715 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Ccdc28aQ8CEI3 Gm43567-201ENSMUST00000197581 1978 ntBASIC5.91□□□□□ -1.46
Ccdc28aQ8CEI3 Gm37051-201ENSMUST00000194535 2943 ntBASIC5.91□□□□□ -1.46
Ccdc28aQ8CEI3 AW551984-202ENSMUST00000119722 4224 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Ccdc28aQ8CEI3 Gm12633-201ENSMUST00000117742 1705 ntBASIC5.91□□□□□ -1.46
Ccdc28aQ8CEI3 Ktn1-209ENSMUST00000187262 3913 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
Ccdc28aQ8CEI3 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC5.9□□□□□ -1.46
Ccdc28aQ8CEI3 Klhl24-201ENSMUST00000023509 6683 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Ccdc28aQ8CEI3 Usp46-202ENSMUST00000119154 4738 ntTSL 5 BASIC5.9□□□□□ -1.46
Ccdc28aQ8CEI3 Gm28672-201ENSMUST00000188727 1490 ntTSL 5 BASIC5.9□□□□□ -1.46
Ccdc28aQ8CEI3 Fbxw27-208ENSMUST00000212725 1483 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
Ccdc28aQ8CEI3 AC166344.3-203ENSMUST00000228117 1466 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Ccdc28aQ8CEI3 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Ccdc28aQ8CEI3 Vmn2r5-201ENSMUST00000170270 2484 ntAPPRIS P2 TSL 5 BASIC5.9□□□□□ -1.46
Ccdc28aQ8CEI3 Gm43771-201ENSMUST00000202931 1578 ntBASIC5.9□□□□□ -1.46
Ccdc28aQ8CEI3 Gm9077-201ENSMUST00000210657 2298 ntBASIC5.9□□□□□ -1.46
Ccdc28aQ8CEI3 Gm12281-201ENSMUST00000119536 298 ntBASIC5.9□□□□□ -1.46
Ccdc28aQ8CEI3 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC5.9□□□□□ -1.46
Ccdc28aQ8CEI3 Gm12494-201ENSMUST00000121684 521 ntBASIC5.9□□□□□ -1.46
Ccdc28aQ8CEI3 n-R5s201-201ENSMUST00000122622 116 ntBASIC5.9□□□□□ -1.46
Ccdc28aQ8CEI3 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Ccdc28aQ8CEI3 Gm11364-201ENSMUST00000137593 297 ntTSL 5 BASIC5.9□□□□□ -1.46
Ccdc28aQ8CEI3 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC5.9□□□□□ -1.46
Ccdc28aQ8CEI3 Gm5125-201ENSMUST00000148614 624 ntBASIC5.9□□□□□ -1.46
Ccdc28aQ8CEI3 Gm6264-201ENSMUST00000160802 624 ntBASIC5.9□□□□□ -1.46
Ccdc28aQ8CEI3 Gm25065-201ENSMUST00000177914 132 ntBASIC5.9□□□□□ -1.46
Ccdc28aQ8CEI3 Gm25891-201ENSMUST00000180050 132 ntBASIC5.9□□□□□ -1.46
Ccdc28aQ8CEI3 Gm26607-201ENSMUST00000180661 867 ntBASIC5.9□□□□□ -1.46
Ccdc28aQ8CEI3 Gm28526-201ENSMUST00000187731 419 ntTSL 2 BASIC5.9□□□□□ -1.46
Ccdc28aQ8CEI3 Gm19585-202ENSMUST00000191539 327 ntTSL 3 BASIC5.9□□□□□ -1.46
Ccdc28aQ8CEI3 Olfr1353-202ENSMUST00000204849 1015 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Ccdc28aQ8CEI3 4933430N04Rik-202ENSMUST00000208031 1146 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Ccdc28aQ8CEI3 CT033754.1-201ENSMUST00000216941 531 ntTSL 3 BASIC5.9□□□□□ -1.46
Ccdc28aQ8CEI3 Gm40685-201ENSMUST00000217861 580 ntTSL 3 BASIC5.9□□□□□ -1.46
Ccdc28aQ8CEI3 AC132384.3-201ENSMUST00000219709 472 ntBASIC5.9□□□□□ -1.46
Ccdc28aQ8CEI3 AC124537.2-201ENSMUST00000220872 883 ntTSL 5 BASIC5.9□□□□□ -1.46
Ccdc28aQ8CEI3 Gm18413-201ENSMUST00000221573 655 ntBASIC5.9□□□□□ -1.46
Ccdc28aQ8CEI3 Olfr697-201ENSMUST00000050541 1047 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Ccdc28aQ8CEI3 Olfr1336-201ENSMUST00000056120 945 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Ccdc28aQ8CEI3 Klrc3-201ENSMUST00000071149 715 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Ccdc28aQ8CEI3 Mir7b-201ENSMUST00000083557 111 ntBASIC5.9□□□□□ -1.46
Ccdc28aQ8CEI3 Defb18-201ENSMUST00000097818 258 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Ccdc28aQ8CEI3 Angel2-201ENSMUST00000027947 3562 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Ccdc28aQ8CEI3 Gm26893-202ENSMUST00000180965 2079 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Ccdc28aQ8CEI3 Gm26552-202ENSMUST00000180980 2079 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Ccdc28aQ8CEI3 Lipk-203ENSMUST00000225505 2083 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
Ccdc28aQ8CEI3 Gm38224-201ENSMUST00000191648 2100 ntBASIC5.9□□□□□ -1.47
Ccdc28aQ8CEI3 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC5.9□□□□□ -1.47
Ccdc28aQ8CEI3 Dnajb7-201ENSMUST00000057236 1374 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
Ccdc28aQ8CEI3 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Ccdc28aQ8CEI3 Olfr461-202ENSMUST00000215009 4292 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Ccdc28aQ8CEI3 F830112A20Rik-201ENSMUST00000194249 3552 ntBASIC5.9□□□□□ -1.47
Ccdc28aQ8CEI3 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Ccdc28aQ8CEI3 Casp1-201ENSMUST00000027015 1497 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Ccdc28aQ8CEI3 F13b-201ENSMUST00000027615 2379 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ccdc28aQ8CEI3 Prom1-203ENSMUST00000087441 3664 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ccdc28aQ8CEI3 Dusp16-204ENSMUST00000149776 3305 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Ccdc28aQ8CEI3 Slc28a2-201ENSMUST00000028652 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ccdc28aQ8CEI3 Gm12185-202ENSMUST00000094476 5264 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Ccdc28aQ8CEI3 Mug-ps1-201ENSMUST00000186891 4386 ntBASIC5.89□□□□□ -1.47
Ccdc28aQ8CEI3 Dock10-205ENSMUST00000187774 6796 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ccdc28aQ8CEI3 Gm14886-201ENSMUST00000117208 2629 ntBASIC5.89□□□□□ -1.47
Ccdc28aQ8CEI3 Dclre1a-204ENSMUST00000182276 4066 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ccdc28aQ8CEI3 Gm42508-201ENSMUST00000199972 3292 ntBASIC5.89□□□□□ -1.47
Ccdc28aQ8CEI3 Scoc-201ENSMUST00000081506 1791 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Ccdc28aQ8CEI3 Il19-202ENSMUST00000112465 880 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ccdc28aQ8CEI3 Gm7146-201ENSMUST00000116079 739 ntBASIC5.89□□□□□ -1.47
Ccdc28aQ8CEI3 Gm12713-201ENSMUST00000118404 764 ntBASIC5.89□□□□□ -1.47
Ccdc28aQ8CEI3 Gm12375-201ENSMUST00000119331 921 ntBASIC5.89□□□□□ -1.47
Ccdc28aQ8CEI3 Gm7571-201ENSMUST00000120252 927 ntBASIC5.89□□□□□ -1.47
Ccdc28aQ8CEI3 Crem-207ENSMUST00000126578 915 ntTSL 5 BASIC5.89□□□□□ -1.47
Ccdc28aQ8CEI3 Gm23050-201ENSMUST00000158775 165 ntBASIC5.89□□□□□ -1.47
Ccdc28aQ8CEI3 Gm5087-203ENSMUST00000161835 814 ntTSL 2 BASIC5.89□□□□□ -1.47
Ccdc28aQ8CEI3 Gm9006-201ENSMUST00000165520 841 ntBASIC5.89□□□□□ -1.47
Ccdc28aQ8CEI3 Il19-201ENSMUST00000016668 1021 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ccdc28aQ8CEI3 Vmn2r-ps12-201ENSMUST00000175833 623 ntBASIC5.89□□□□□ -1.47
Ccdc28aQ8CEI3 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ccdc28aQ8CEI3 Gm26057-201ENSMUST00000178099 165 ntBASIC5.89□□□□□ -1.47
Ccdc28aQ8CEI3 Gm21614-201ENSMUST00000183260 1005 ntBASIC5.89□□□□□ -1.47
Ccdc28aQ8CEI3 Gm27148-201ENSMUST00000185086 160 ntBASIC5.89□□□□□ -1.47
Ccdc28aQ8CEI3 Gm37591-201ENSMUST00000193283 650 ntTSL 3 BASIC5.89□□□□□ -1.47
Ccdc28aQ8CEI3 Gm37270-201ENSMUST00000194277 330 ntBASIC5.89□□□□□ -1.47
Ccdc28aQ8CEI3 Gm38360-201ENSMUST00000195130 454 ntBASIC5.89□□□□□ -1.47
Ccdc28aQ8CEI3 Gm44997-202ENSMUST00000205970 425 ntTSL 3 BASIC5.89□□□□□ -1.47
Ccdc28aQ8CEI3 Rfpl4-203ENSMUST00000208468 1238 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
Ccdc28aQ8CEI3 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC5.89□□□□□ -1.47
Ccdc28aQ8CEI3 Gm20786-201ENSMUST00000212649 436 ntBASIC5.89□□□□□ -1.47
Ccdc28aQ8CEI3 Erh-204ENSMUST00000218364 665 ntTSL 3 BASIC5.89□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms