Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Gm22499-201ENSMUST00000104501 135 ntBASIC5.69□□□□□ -1.5
Lrif1Q8CDD9 Gm5751-201ENSMUST00000115561 444 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Lrif1Q8CDD9 Gm11821-201ENSMUST00000117335 979 ntBASIC5.69□□□□□ -1.5
Lrif1Q8CDD9 Gm13363-201ENSMUST00000122008 522 ntBASIC5.69□□□□□ -1.5
Lrif1Q8CDD9 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC5.69□□□□□ -1.5
Lrif1Q8CDD9 Gm11731-201ENSMUST00000139704 670 ntTSL 3 BASIC5.69□□□□□ -1.5
Lrif1Q8CDD9 Bloc1s6os-201ENSMUST00000150154 696 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Lrif1Q8CDD9 Gm24687-201ENSMUST00000157758 241 ntBASIC5.69□□□□□ -1.5
Lrif1Q8CDD9 Gm17333-201ENSMUST00000169531 378 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Lrif1Q8CDD9 Mirt2-201ENSMUST00000175179 285 ntBASIC5.69□□□□□ -1.5
Lrif1Q8CDD9 1700006E09Rik-203ENSMUST00000176722 608 ntTSL 3 BASIC5.69□□□□□ -1.5
Lrif1Q8CDD9 AF067063-201ENSMUST00000179455 590 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Lrif1Q8CDD9 AF067061-201ENSMUST00000179905 1174 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Lrif1Q8CDD9 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC5.69□□□□□ -1.5
Lrif1Q8CDD9 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Lrif1Q8CDD9 Gm37784-201ENSMUST00000193233 189 ntBASIC5.69□□□□□ -1.5
Lrif1Q8CDD9 A730094K22Rik-201ENSMUST00000193867 740 ntBASIC5.69□□□□□ -1.5
Lrif1Q8CDD9 Olfr181-203ENSMUST00000205742 1104 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Lrif1Q8CDD9 Olfr162-ps1-201ENSMUST00000206015 934 ntBASIC5.69□□□□□ -1.5
Lrif1Q8CDD9 Gm45082-201ENSMUST00000206082 601 ntBASIC5.69□□□□□ -1.5
Lrif1Q8CDD9 Gm7499-201ENSMUST00000210423 813 ntBASIC5.69□□□□□ -1.5
Lrif1Q8CDD9 Gm8863-201ENSMUST00000216630 926 ntBASIC5.69□□□□□ -1.5
Lrif1Q8CDD9 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC5.69□□□□□ -1.5
Lrif1Q8CDD9 A330049N07Rik-202ENSMUST00000219920 587 ntTSL 5 BASIC5.69□□□□□ -1.5
Lrif1Q8CDD9 Gm10095-201ENSMUST00000222765 483 ntBASIC5.69□□□□□ -1.5
Lrif1Q8CDD9 Scgb2b24-201ENSMUST00000055444 523 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Lrif1Q8CDD9 Defb42-201ENSMUST00000067990 618 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Lrif1Q8CDD9 Taar4-201ENSMUST00000092660 1044 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Lrif1Q8CDD9 4933406F09Rik-204ENSMUST00000181409 2078 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Lrif1Q8CDD9 Trim5-202ENSMUST00000098179 3655 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Lrif1Q8CDD9 Gm9077-201ENSMUST00000210657 2298 ntBASIC5.69□□□□□ -1.5
Lrif1Q8CDD9 AC166358.5-201ENSMUST00000220706 1302 ntBASIC5.69□□□□□ -1.5
Lrif1Q8CDD9 Zp3r-203ENSMUST00000142416 1835 ntTSL 5 BASIC5.69□□□□□ -1.5
Lrif1Q8CDD9 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Lrif1Q8CDD9 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Lrif1Q8CDD9 BC065397-203ENSMUST00000134066 3201 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Lrif1Q8CDD9 Atp8b5-202ENSMUST00000102953 2609 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Lrif1Q8CDD9 Mboat2-204ENSMUST00000221952 6792 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Lrif1Q8CDD9 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Lrif1Q8CDD9 Gm39327-201ENSMUST00000213594 1982 ntTSL 5 BASIC5.68□□□□□ -1.5
Lrif1Q8CDD9 Aftph-205ENSMUST00000146722 3763 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Lrif1Q8CDD9 Gm37456-201ENSMUST00000193176 5837 ntBASIC5.68□□□□□ -1.5
Lrif1Q8CDD9 Olfr361-201ENSMUST00000100145 969 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Lrif1Q8CDD9 9230009I02Rik-201ENSMUST00000101255 1148 ntTSL 2 BASIC5.68□□□□□ -1.5
Lrif1Q8CDD9 Gin1-202ENSMUST00000112842 1037 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Lrif1Q8CDD9 Gm13114-201ENSMUST00000117605 106 ntBASIC5.68□□□□□ -1.5
Lrif1Q8CDD9 Gm13024-201ENSMUST00000121756 718 ntBASIC5.68□□□□□ -1.5
Lrif1Q8CDD9 Olfr213-201ENSMUST00000121958 984 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Lrif1Q8CDD9 Olfr118-201ENSMUST00000122036 966 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Lrif1Q8CDD9 Gm24733-201ENSMUST00000158863 253 ntBASIC5.68□□□□□ -1.5
Lrif1Q8CDD9 Gm8837-201ENSMUST00000161037 1107 ntBASIC5.68□□□□□ -1.5
Lrif1Q8CDD9 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC5.68□□□□□ -1.5
Lrif1Q8CDD9 Gm27240-201ENSMUST00000183616 677 ntTSL 3 BASIC5.68□□□□□ -1.5
Lrif1Q8CDD9 4933404I11Rik-201ENSMUST00000190294 1202 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Lrif1Q8CDD9 Gm37375-201ENSMUST00000193859 387 ntBASIC5.68□□□□□ -1.5
Lrif1Q8CDD9 Gm37560-201ENSMUST00000194289 1000 ntBASIC5.68□□□□□ -1.5
Lrif1Q8CDD9 Gm37196-201ENSMUST00000194762 906 ntBASIC5.68□□□□□ -1.5
Lrif1Q8CDD9 Gm37385-201ENSMUST00000195223 387 ntBASIC5.68□□□□□ -1.5
Lrif1Q8CDD9 Gm4332-201ENSMUST00000196114 346 ntBASIC5.68□□□□□ -1.5
Lrif1Q8CDD9 Gm43798-201ENSMUST00000202056 394 ntBASIC5.68□□□□□ -1.5
Lrif1Q8CDD9 Gm17992-201ENSMUST00000207346 1072 ntBASIC5.68□□□□□ -1.5
Lrif1Q8CDD9 Gm19033-201ENSMUST00000208516 964 ntBASIC5.68□□□□□ -1.5
Lrif1Q8CDD9 BC024386-204ENSMUST00000209842 688 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Lrif1Q8CDD9 Gm45343-201ENSMUST00000210452 828 ntBASIC5.68□□□□□ -1.5
Lrif1Q8CDD9 Gm34853-201ENSMUST00000211662 509 ntTSL 5 BASIC5.68□□□□□ -1.5
Lrif1Q8CDD9 Gm5831-201ENSMUST00000216016 1209 ntBASIC5.68□□□□□ -1.5
Lrif1Q8CDD9 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Lrif1Q8CDD9 Gm34574-201ENSMUST00000217795 1240 ntTSL 5 BASIC5.68□□□□□ -1.5
Lrif1Q8CDD9 AC137871.3-201ENSMUST00000226628 225 ntBASIC5.68□□□□□ -1.5
Lrif1Q8CDD9 AC120375.2-202ENSMUST00000228722 397 ntBASIC5.68□□□□□ -1.5
Lrif1Q8CDD9 Ube2dnl1-201ENSMUST00000059509 743 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Lrif1Q8CDD9 Gm8526-201ENSMUST00000079153 475 ntBASIC5.68□□□□□ -1.5
Lrif1Q8CDD9 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC5.68□□□□□ -1.5
Lrif1Q8CDD9 Hnmt-201ENSMUST00000051416 1656 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Lrif1Q8CDD9 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Lrif1Q8CDD9 Gm12388-201ENSMUST00000119112 1887 ntBASIC5.68□□□□□ -1.5
Lrif1Q8CDD9 Ifi206-201ENSMUST00000160565 3047 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Lrif1Q8CDD9 Ehf-202ENSMUST00000111174 1307 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Lrif1Q8CDD9 4930554C24Rik-203ENSMUST00000216802 1346 ntTSL 5 BASIC5.68□□□□□ -1.5
Lrif1Q8CDD9 AC144733.2-201ENSMUST00000222552 2292 ntBASIC5.68□□□□□ -1.5
Lrif1Q8CDD9 Nsun6-201ENSMUST00000028034 2897 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
Lrif1Q8CDD9 Zc2hc1a-201ENSMUST00000051064 3292 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Lrif1Q8CDD9 Pik3c2g-202ENSMUST00000087657 3303 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Lrif1Q8CDD9 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Lrif1Q8CDD9 Gm5832-201ENSMUST00000121704 1582 ntBASIC5.67□□□□□ -1.5
Lrif1Q8CDD9 Gm40987-202ENSMUST00000221856 1588 ntTSL 5 BASIC5.67□□□□□ -1.5
Lrif1Q8CDD9 Ccar1-201ENSMUST00000020268 4352 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Lrif1Q8CDD9 Zfp974-201ENSMUST00000098639 5158 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Lrif1Q8CDD9 Olfr726-207ENSMUST00000217319 1419 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Lrif1Q8CDD9 Sspn-202ENSMUST00000111701 4512 ntTSL 3 BASIC5.67□□□□□ -1.5
Lrif1Q8CDD9 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Lrif1Q8CDD9 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
Lrif1Q8CDD9 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
Lrif1Q8CDD9 Gm14391-204ENSMUST00000109058 1854 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
Lrif1Q8CDD9 Olfr1336-202ENSMUST00000214301 6882 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Lrif1Q8CDD9 Gm44586-201ENSMUST00000207166 2737 ntBASIC5.67□□□□□ -1.5
Lrif1Q8CDD9 Ktn1-224ENSMUST00000191018 4033 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Lrif1Q8CDD9 Igkv4-79-201ENSMUST00000103342 358 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Lrif1Q8CDD9 Ighv8-12-201ENSMUST00000103540 315 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Lrif1Q8CDD9 Gm14485-201ENSMUST00000119489 493 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 169.4 ms