Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 2010016I18Rik-203ENSMUST00000189683 841 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Atg4aQ8C9S8 Gm28640-201ENSMUST00000190918 550 ntBASIC6.88□□□□□ -1.31
Atg4aQ8C9S8 Rpap3-ps1-201ENSMUST00000190928 454 ntBASIC6.88□□□□□ -1.31
Atg4aQ8C9S8 Gm34716-201ENSMUST00000194060 621 ntTSL 5 BASIC6.88□□□□□ -1.31
Atg4aQ8C9S8 Gm18553-201ENSMUST00000194152 634 ntBASIC6.88□□□□□ -1.31
Atg4aQ8C9S8 Gm30353-202ENSMUST00000195486 622 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Atg4aQ8C9S8 Gm42640-201ENSMUST00000199792 1195 ntBASIC6.88□□□□□ -1.31
Atg4aQ8C9S8 Gm4742-201ENSMUST00000200261 771 ntBASIC6.88□□□□□ -1.31
Atg4aQ8C9S8 Gm34549-202ENSMUST00000207356 970 ntTSL 5 BASIC6.88□□□□□ -1.31
Atg4aQ8C9S8 Gm45485-201ENSMUST00000211229 357 ntBASIC6.88□□□□□ -1.31
Atg4aQ8C9S8 Gm11427-204ENSMUST00000216233 999 ntTSL 5 BASIC6.88□□□□□ -1.31
Atg4aQ8C9S8 AC154851.1-201ENSMUST00000221591 655 ntBASIC6.88□□□□□ -1.31
Atg4aQ8C9S8 AC165347.1-201ENSMUST00000224089 1025 ntBASIC6.88□□□□□ -1.31
Atg4aQ8C9S8 Rnase2a-201ENSMUST00000061936 690 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Atg4aQ8C9S8 Gm16335-201ENSMUST00000077495 309 ntBASIC6.88□□□□□ -1.31
Atg4aQ8C9S8 Rpl35a-ps7-201ENSMUST00000080603 333 ntBASIC6.88□□□□□ -1.31
Atg4aQ8C9S8 Gm22807-201ENSMUST00000082737 129 ntBASIC6.88□□□□□ -1.31
Atg4aQ8C9S8 Ssxb5-201ENSMUST00000089370 602 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Atg4aQ8C9S8 Olfr285-202ENSMUST00000216901 5330 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Atg4aQ8C9S8 Ndst3-201ENSMUST00000029602 5335 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Atg4aQ8C9S8 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Atg4aQ8C9S8 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
Atg4aQ8C9S8 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Atg4aQ8C9S8 Gm26893-202ENSMUST00000180965 2079 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Atg4aQ8C9S8 Gm26552-202ENSMUST00000180980 2079 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Atg4aQ8C9S8 Fmo9-201ENSMUST00000027843 3065 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Atg4aQ8C9S8 Gm43842-201ENSMUST00000202890 2982 ntBASIC6.87□□□□□ -1.31
Atg4aQ8C9S8 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC6.87□□□□□ -1.31
Atg4aQ8C9S8 Gm3608-201ENSMUST00000086725 2858 ntBASIC6.87□□□□□ -1.31
Atg4aQ8C9S8 4933411E08Rik-201ENSMUST00000217950 1689 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Atg4aQ8C9S8 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
Atg4aQ8C9S8 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Atg4aQ8C9S8 Gm37087-201ENSMUST00000192966 3309 ntBASIC6.87□□□□□ -1.31
Atg4aQ8C9S8 Gm37752-201ENSMUST00000193494 3309 ntBASIC6.87□□□□□ -1.31
Atg4aQ8C9S8 Olfr25-202ENSMUST00000212354 1362 ntAPPRIS ALT2 BASIC6.87□□□□□ -1.31
Atg4aQ8C9S8 Ighv1-39-201ENSMUST00000103515 351 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Atg4aQ8C9S8 Gm11908-201ENSMUST00000117755 347 ntBASIC6.87□□□□□ -1.31
Atg4aQ8C9S8 1700093J21Rik-201ENSMUST00000143671 648 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Atg4aQ8C9S8 Gm26170-201ENSMUST00000158419 148 ntBASIC6.87□□□□□ -1.31
Atg4aQ8C9S8 Gm6872-201ENSMUST00000165001 700 ntBASIC6.87□□□□□ -1.31
Atg4aQ8C9S8 Pfdn5-208ENSMUST00000170627 330 ntTSL 5 BASIC6.87□□□□□ -1.31
Atg4aQ8C9S8 Gm16617-201ENSMUST00000181008 675 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Atg4aQ8C9S8 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC6.87□□□□□ -1.31
Atg4aQ8C9S8 Gm42753-201ENSMUST00000196718 1268 ntBASIC6.87□□□□□ -1.31
Atg4aQ8C9S8 Igkv4-75-201ENSMUST00000197204 359 ntBASIC6.87□□□□□ -1.31
Atg4aQ8C9S8 Gm44580-201ENSMUST00000206333 877 ntBASIC6.87□□□□□ -1.31
Atg4aQ8C9S8 Gm10709-201ENSMUST00000213318 480 ntBASIC6.87□□□□□ -1.31
Atg4aQ8C9S8 1700048P04Rik-201ENSMUST00000219825 369 ntTSL 3 BASIC6.87□□□□□ -1.31
Atg4aQ8C9S8 AC134860.4-201ENSMUST00000223592 978 ntBASIC6.87□□□□□ -1.31
Atg4aQ8C9S8 Cd84-201ENSMUST00000042302 1019 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
Atg4aQ8C9S8 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC6.87□□□□□ -1.31
Atg4aQ8C9S8 Olfr684-201ENSMUST00000060893 939 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Atg4aQ8C9S8 Mir298-201ENSMUST00000083476 82 ntBASIC6.87□□□□□ -1.31
Atg4aQ8C9S8 Olfr1353-201ENSMUST00000039718 1992 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
Atg4aQ8C9S8 Gm42508-201ENSMUST00000199972 3292 ntBASIC6.87□□□□□ -1.31
Atg4aQ8C9S8 Tbl1xr1-201ENSMUST00000063988 6667 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Atg4aQ8C9S8 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Atg4aQ8C9S8 Olfr721-ps1-203ENSMUST00000215479 3075 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Atg4aQ8C9S8 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Atg4aQ8C9S8 Piga-202ENSMUST00000112255 3597 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Atg4aQ8C9S8 Lama2-207ENSMUST00000189575 4244 ntTSL 5 BASIC6.87□□□□□ -1.31
Atg4aQ8C9S8 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC6.87□□□□□ -1.31
Atg4aQ8C9S8 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Atg4aQ8C9S8 Dock7-214ENSMUST00000205650 6297 ntAPPRIS P3 TSL 5 BASIC6.86□□□□□ -1.31
Atg4aQ8C9S8 Ubtfl1-202ENSMUST00000164441 2639 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Atg4aQ8C9S8 Gm35028-201ENSMUST00000215400 2587 ntTSL 5 BASIC6.86□□□□□ -1.31
Atg4aQ8C9S8 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Atg4aQ8C9S8 Olfr259-204ENSMUST00000216088 4023 ntAPPRIS P1 TSL 3 BASIC6.86□□□□□ -1.31
Atg4aQ8C9S8 Gm23839-201ENSMUST00000116957 109 ntBASIC6.86□□□□□ -1.31
Atg4aQ8C9S8 Gm12482-201ENSMUST00000120435 630 ntBASIC6.86□□□□□ -1.31
Atg4aQ8C9S8 Gm23233-201ENSMUST00000157301 137 ntBASIC6.86□□□□□ -1.31
Atg4aQ8C9S8 Gm22885-201ENSMUST00000157410 107 ntBASIC6.86□□□□□ -1.31
Atg4aQ8C9S8 Gm24731-201ENSMUST00000158227 131 ntBASIC6.86□□□□□ -1.31
Atg4aQ8C9S8 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Atg4aQ8C9S8 Mnd1-ps-201ENSMUST00000162462 604 ntBASIC6.86□□□□□ -1.31
Atg4aQ8C9S8 Gm21139-201ENSMUST00000186594 877 ntBASIC6.86□□□□□ -1.31
Atg4aQ8C9S8 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC6.86□□□□□ -1.31
Atg4aQ8C9S8 1700031M16Rik-206ENSMUST00000191037 711 ntAPPRIS P5 TSL 3 BASIC6.86□□□□□ -1.31
Atg4aQ8C9S8 Gm37203-201ENSMUST00000191618 385 ntBASIC6.86□□□□□ -1.31
Atg4aQ8C9S8 Epgn-202ENSMUST00000202724 805 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Atg4aQ8C9S8 Gm39384-201ENSMUST00000213703 743 ntTSL 5 BASIC6.86□□□□□ -1.31
Atg4aQ8C9S8 Gm19174-201ENSMUST00000216944 956 ntBASIC6.86□□□□□ -1.31
Atg4aQ8C9S8 Gm5374-202ENSMUST00000222910 314 ntBASIC6.86□□□□□ -1.31
Atg4aQ8C9S8 AC161609.1-201ENSMUST00000225878 474 ntBASIC6.86□□□□□ -1.31
Atg4aQ8C9S8 Ceacam12-201ENSMUST00000032520 1056 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
Atg4aQ8C9S8 n-R5s215-201ENSMUST00000082480 104 ntBASIC6.86□□□□□ -1.31
Atg4aQ8C9S8 Hgf-203ENSMUST00000196645 2189 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Atg4aQ8C9S8 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Atg4aQ8C9S8 Mageb18-201ENSMUST00000088137 1571 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Atg4aQ8C9S8 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Atg4aQ8C9S8 Xkrx-201ENSMUST00000033611 2876 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Atg4aQ8C9S8 Rsph4a-201ENSMUST00000169670 3650 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Atg4aQ8C9S8 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
Atg4aQ8C9S8 AC166344.3-203ENSMUST00000228117 1466 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Atg4aQ8C9S8 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Atg4aQ8C9S8 AC122357.3-201ENSMUST00000221260 2293 ntBASIC6.85□□□□□ -1.31
Atg4aQ8C9S8 Gm8229-201ENSMUST00000168161 1403 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Atg4aQ8C9S8 Gm17175-201ENSMUST00000172117 1403 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Atg4aQ8C9S8 Gm37132-201ENSMUST00000195553 2238 ntBASIC6.85□□□□□ -1.31
Atg4aQ8C9S8 Lrp2bp-203ENSMUST00000110381 3421 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms