Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 AL670757.1-201ENSMUST00000223668 1959 ntBASIC8.22□□□□□ -1.09
Usp40Q8BWR4 CT009696.4-202ENSMUST00000213560 2248 ntTSL 5 BASIC8.22□□□□□ -1.09
Usp40Q8BWR4 Gm45786-201ENSMUST00000213021 2278 ntBASIC8.22□□□□□ -1.09
Usp40Q8BWR4 Amz2-201ENSMUST00000020929 1811 ntAPPRIS ALT2 TSL 2 BASIC8.22□□□□□ -1.09
Usp40Q8BWR4 Gm18632-201ENSMUST00000222597 2087 ntBASIC8.22□□□□□ -1.09
Usp40Q8BWR4 AC110043.1-201ENSMUST00000220278 1627 ntBASIC8.21□□□□□ -1.09
Usp40Q8BWR4 Dock7-205ENSMUST00000127417 6796 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.09
Usp40Q8BWR4 Gm44043-201ENSMUST00000203426 3253 ntBASIC8.21□□□□□ -1.09
Usp40Q8BWR4 Zfp457-201ENSMUST00000049705 2117 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
Usp40Q8BWR4 AY512931-201ENSMUST00000139751 2395 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Usp40Q8BWR4 G530011O06Rik-201ENSMUST00000154810 2380 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Usp40Q8BWR4 Spata31d1d-201ENSMUST00000052978 3827 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.09
Usp40Q8BWR4 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Usp40Q8BWR4 Cyp2j6-201ENSMUST00000030303 3605 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Usp40Q8BWR4 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Usp40Q8BWR4 Fbxw27-208ENSMUST00000212725 1483 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.09
Usp40Q8BWR4 Gm15950-201ENSMUST00000162902 1973 ntBASIC8.21□□□□□ -1.09
Usp40Q8BWR4 5031410I06Rik-201ENSMUST00000063524 2995 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Usp40Q8BWR4 Gm7347-201ENSMUST00000095004 2995 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Usp40Q8BWR4 Gm37855-201ENSMUST00000192571 3700 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Usp40Q8BWR4 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Usp40Q8BWR4 Kng2-202ENSMUST00000100046 2294 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
Usp40Q8BWR4 Olfr1181-202ENSMUST00000102619 1240 ntAPPRIS P1 TSL 3 BASIC8.21□□□□□ -1.1
Usp40Q8BWR4 Gm22592-201ENSMUST00000104242 131 ntBASIC8.21□□□□□ -1.1
Usp40Q8BWR4 Olfr1330-202ENSMUST00000105035 1027 ntAPPRIS P1 TSL 3 BASIC8.21□□□□□ -1.1
Usp40Q8BWR4 Gm15073-201ENSMUST00000117432 634 ntBASIC8.21□□□□□ -1.1
Usp40Q8BWR4 Gm12901-201ENSMUST00000118690 532 ntBASIC8.21□□□□□ -1.1
Usp40Q8BWR4 Olfr590-ps1-201ENSMUST00000118801 898 ntBASIC8.21□□□□□ -1.1
Usp40Q8BWR4 Gm13338-201ENSMUST00000120235 361 ntBASIC8.21□□□□□ -1.1
Usp40Q8BWR4 Vmn1r-ps132-201ENSMUST00000120434 892 ntBASIC8.21□□□□□ -1.1
Usp40Q8BWR4 Gm12731-201ENSMUST00000120932 268 ntBASIC8.21□□□□□ -1.1
Usp40Q8BWR4 Klra13-ps-201ENSMUST00000125813 802 ntBASIC8.21□□□□□ -1.1
Usp40Q8BWR4 Smyd1-204ENSMUST00000129630 376 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Usp40Q8BWR4 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC8.21□□□□□ -1.1
Usp40Q8BWR4 5330429C05Rik-201ENSMUST00000154615 487 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Usp40Q8BWR4 Gm23777-201ENSMUST00000158994 259 ntBASIC8.21□□□□□ -1.1
Usp40Q8BWR4 Olfr102-201ENSMUST00000169373 1027 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Usp40Q8BWR4 1700028M03Rik-201ENSMUST00000185938 476 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Usp40Q8BWR4 Fam122c-203ENSMUST00000186314 898 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.1
Usp40Q8BWR4 Gm33248-202ENSMUST00000206954 486 ntTSL 5 BASIC8.21□□□□□ -1.1
Usp40Q8BWR4 Gm4756-203ENSMUST00000208307 798 ntTSL 3 BASIC8.21□□□□□ -1.1
Usp40Q8BWR4 Gm46136-201ENSMUST00000214730 565 ntBASIC8.21□□□□□ -1.1
Usp40Q8BWR4 AC153845.2-203ENSMUST00000215889 617 ntTSL 3 BASIC8.21□□□□□ -1.1
Usp40Q8BWR4 Gm35274-201ENSMUST00000217709 646 ntTSL 5 BASIC8.21□□□□□ -1.1
Usp40Q8BWR4 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC8.21□□□□□ -1.1
Usp40Q8BWR4 Gm40598-201ENSMUST00000222953 547 ntBASIC8.21□□□□□ -1.1
Usp40Q8BWR4 Gm7550-201ENSMUST00000223334 282 ntTSL 5 BASIC8.21□□□□□ -1.1
Usp40Q8BWR4 Vmn1r226-201ENSMUST00000061756 897 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Usp40Q8BWR4 Olfr958-201ENSMUST00000062545 942 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Usp40Q8BWR4 Spint3-201ENSMUST00000099097 557 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Usp40Q8BWR4 Olfr1181-201ENSMUST00000099823 936 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Usp40Q8BWR4 Tor1aip2-203ENSMUST00000097526 2589 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Usp40Q8BWR4 Gm20756-202ENSMUST00000201324 1565 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Usp40Q8BWR4 Vmn1r26-204ENSMUST00000228951 4591 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Usp40Q8BWR4 Olfr1389-203ENSMUST00000217595 3549 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Usp40Q8BWR4 Pgbd1-201ENSMUST00000099719 3283 ntAPPRIS P4 TSL 1 (best) BASIC8.21□□□□□ -1.1
Usp40Q8BWR4 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
Usp40Q8BWR4 Nemf-201ENSMUST00000021368 4732 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Usp40Q8BWR4 Slc26a7-201ENSMUST00000042221 5165 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Usp40Q8BWR4 Gm1698-201ENSMUST00000136749 2313 ntTSL 2 BASIC8.2□□□□□ -1.1
Usp40Q8BWR4 Gm7416-201ENSMUST00000117448 1487 ntBASIC8.2□□□□□ -1.1
Usp40Q8BWR4 Arhgef12-201ENSMUST00000072767 10059 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Usp40Q8BWR4 Ncoa6-202ENSMUST00000109669 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Usp40Q8BWR4 Cyld-206ENSMUST00000209559 4476 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
Usp40Q8BWR4 Gm44113-201ENSMUST00000203510 3041 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Usp40Q8BWR4 Synrg-208ENSMUST00000183714 3651 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
Usp40Q8BWR4 4930421C12Rik-201ENSMUST00000200814 1574 ntBASIC8.2□□□□□ -1.1
Usp40Q8BWR4 Gm26078-201ENSMUST00000104067 128 ntBASIC8.2□□□□□ -1.1
Usp40Q8BWR4 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Usp40Q8BWR4 Gm14382-201ENSMUST00000117374 437 ntBASIC8.2□□□□□ -1.1
Usp40Q8BWR4 Gm13866-201ENSMUST00000118901 968 ntBASIC8.2□□□□□ -1.1
Usp40Q8BWR4 Gm14521-201ENSMUST00000119545 350 ntBASIC8.2□□□□□ -1.1
Usp40Q8BWR4 Gm6806-201ENSMUST00000120092 1006 ntBASIC8.2□□□□□ -1.1
Usp40Q8BWR4 Vmn1r-ps102-201ENSMUST00000120663 886 ntBASIC8.2□□□□□ -1.1
Usp40Q8BWR4 Gm12293-201ENSMUST00000121898 590 ntBASIC8.2□□□□□ -1.1
Usp40Q8BWR4 Gm11734-201ENSMUST00000132261 728 ntTSL 3 BASIC8.2□□□□□ -1.1
Usp40Q8BWR4 Gm13330-201ENSMUST00000136400 388 ntTSL 5 BASIC8.2□□□□□ -1.1
Usp40Q8BWR4 Gm12147-201ENSMUST00000144024 182 ntTSL 3 BASIC8.2□□□□□ -1.1
Usp40Q8BWR4 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
Usp40Q8BWR4 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
Usp40Q8BWR4 4930405L22Rik-201ENSMUST00000198088 585 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Usp40Q8BWR4 Nts-201ENSMUST00000020040 1248 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Usp40Q8BWR4 Gm44134-201ENSMUST00000203064 661 ntTSL 2 BASIC8.2□□□□□ -1.1
Usp40Q8BWR4 Tas2r146-ps1-201ENSMUST00000203065 934 ntBASIC8.2□□□□□ -1.1
Usp40Q8BWR4 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Usp40Q8BWR4 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Usp40Q8BWR4 AC142113.2-201ENSMUST00000217425 748 ntBASIC8.2□□□□□ -1.1
Usp40Q8BWR4 AC192333.6-201ENSMUST00000224565 725 ntBASIC8.2□□□□□ -1.1
Usp40Q8BWR4 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Usp40Q8BWR4 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Usp40Q8BWR4 Ctla4-202ENSMUST00000097720 614 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
Usp40Q8BWR4 Olfr635-201ENSMUST00000098185 966 ntAPPRIS P2 BASIC8.2□□□□□ -1.1
Usp40Q8BWR4 AC167013.5-201ENSMUST00000227597 2947 ntBASIC8.2□□□□□ -1.1
Usp40Q8BWR4 Gm45084-201ENSMUST00000207096 1957 ntBASIC8.2□□□□□ -1.1
Usp40Q8BWR4 AC153143.1-201ENSMUST00000222966 1340 ntBASIC8.2□□□□□ -1.1
Usp40Q8BWR4 Rab11fip2-203ENSMUST00000171986 5363 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Usp40Q8BWR4 Scp2-ps2-203ENSMUST00000216438 1370 ntBASIC8.2□□□□□ -1.1
Usp40Q8BWR4 Vmn1r12-202ENSMUST00000226866 6639 ntAPPRIS P2 BASIC8.2□□□□□ -1.1
Usp40Q8BWR4 C2cd3-202ENSMUST00000098259 6602 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
Usp40Q8BWR4 Cyp2c29-202ENSMUST00000176624 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 121.1 ms