Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm3348-201ENSMUST00000177813 850 ntBASIC6.69□□□□□ -1.34
Nup98Q6PFD9 Gm21241-201ENSMUST00000179551 934 ntBASIC6.69□□□□□ -1.34
Nup98Q6PFD9 Gm29582-201ENSMUST00000185667 931 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Nup98Q6PFD9 Gm20838-202ENSMUST00000187712 931 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Nup98Q6PFD9 1700040F15Rik-201ENSMUST00000188244 931 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Nup98Q6PFD9 Gm21996-201ENSMUST00000188269 931 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Nup98Q6PFD9 Gm21256-202ENSMUST00000188881 932 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Nup98Q6PFD9 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Nup98Q6PFD9 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Nup98Q6PFD9 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Nup98Q6PFD9 Gm20792-201ENSMUST00000189765 931 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Nup98Q6PFD9 Gm28919-201ENSMUST00000190026 920 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Nup98Q6PFD9 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Nup98Q6PFD9 Gm21861-202ENSMUST00000190806 931 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Nup98Q6PFD9 Gm20819-201ENSMUST00000191091 925 ntBASIC6.69□□□□□ -1.34
Nup98Q6PFD9 Gm20871-201ENSMUST00000191322 931 ntBASIC6.69□□□□□ -1.34
Nup98Q6PFD9 Gm21865-202ENSMUST00000191443 923 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Nup98Q6PFD9 Gm30737-201ENSMUST00000192683 923 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Nup98Q6PFD9 Ighv1-19-1-201ENSMUST00000192823 351 ntBASIC6.69□□□□□ -1.34
Nup98Q6PFD9 Gm35134-201ENSMUST00000194086 923 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Nup98Q6PFD9 Ighv1-35-201ENSMUST00000195265 351 ntBASIC6.69□□□□□ -1.34
Nup98Q6PFD9 Gatad1-204ENSMUST00000196304 704 ntTSL 3 BASIC6.69□□□□□ -1.34
Nup98Q6PFD9 Gm43262-201ENSMUST00000202970 1219 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Nup98Q6PFD9 6720469O03Rik-201ENSMUST00000206785 1201 ntBASIC6.69□□□□□ -1.34
Nup98Q6PFD9 Gm5941-201ENSMUST00000096371 560 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Nup98Q6PFD9 Olfr111-201ENSMUST00000097325 1041 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Nup98Q6PFD9 Gm18853-201ENSMUST00000183629 3596 ntBASIC6.69□□□□□ -1.34
Nup98Q6PFD9 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Nup98Q6PFD9 Rbm46os-201ENSMUST00000131274 3261 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Nup98Q6PFD9 Zfp157-201ENSMUST00000085856 5312 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Nup98Q6PFD9 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC6.69□□□□□ -1.34
Nup98Q6PFD9 Gm44209-201ENSMUST00000204556 4153 ntBASIC6.69□□□□□ -1.34
Nup98Q6PFD9 Ttc41-202ENSMUST00000075632 4366 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Nup98Q6PFD9 Gm22273-201ENSMUST00000104040 132 ntBASIC6.69□□□□□ -1.34
Nup98Q6PFD9 Mir1188-201ENSMUST00000116756 120 ntBASIC6.69□□□□□ -1.34
Nup98Q6PFD9 Gm14874-201ENSMUST00000118995 438 ntBASIC6.69□□□□□ -1.34
Nup98Q6PFD9 Olfr213-201ENSMUST00000121958 984 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Nup98Q6PFD9 Mpc1-203ENSMUST00000130559 603 ntTSL 2 BASIC6.69□□□□□ -1.34
Nup98Q6PFD9 Klra8-201ENSMUST00000014476 1178 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Nup98Q6PFD9 Gm11507-201ENSMUST00000156462 412 ntBASIC6.69□□□□□ -1.34
Nup98Q6PFD9 Scarna13-201ENSMUST00000158164 275 ntBASIC6.69□□□□□ -1.34
Nup98Q6PFD9 Vmn1r101-201ENSMUST00000164245 924 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Nup98Q6PFD9 Vmn1r119-201ENSMUST00000164683 924 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Nup98Q6PFD9 Vmn1r149-201ENSMUST00000165916 924 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Nup98Q6PFD9 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC6.69□□□□□ -1.34
Nup98Q6PFD9 Gm8032-201ENSMUST00000171009 574 ntBASIC6.69□□□□□ -1.34
Nup98Q6PFD9 Gm4187-201ENSMUST00000172551 924 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Nup98Q6PFD9 Gm4133-201ENSMUST00000172989 924 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Nup98Q6PFD9 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC6.69□□□□□ -1.34
Nup98Q6PFD9 Gm37152-201ENSMUST00000193369 1175 ntBASIC6.69□□□□□ -1.34
Nup98Q6PFD9 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC6.69□□□□□ -1.34
Nup98Q6PFD9 Gm17992-201ENSMUST00000207346 1072 ntBASIC6.69□□□□□ -1.34
Nup98Q6PFD9 1700019C18Rik-202ENSMUST00000221688 1047 ntTSL 5 BASIC6.69□□□□□ -1.34
Nup98Q6PFD9 AC161609.1-201ENSMUST00000225878 474 ntBASIC6.69□□□□□ -1.34
Nup98Q6PFD9 Gm23511-201ENSMUST00000083084 164 ntBASIC6.69□□□□□ -1.34
Nup98Q6PFD9 Olfr704-202ENSMUST00000098141 948 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Nup98Q6PFD9 Wfdc9-201ENSMUST00000099095 252 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Nup98Q6PFD9 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Nup98Q6PFD9 Chrna6-201ENSMUST00000033882 2906 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Nup98Q6PFD9 Gm14857-201ENSMUST00000117862 3185 ntBASIC6.68□□□□□ -1.34
Nup98Q6PFD9 Gm16325-201ENSMUST00000141199 3174 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Nup98Q6PFD9 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Nup98Q6PFD9 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
Nup98Q6PFD9 G630018N14Rik-203ENSMUST00000221171 5888 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Nup98Q6PFD9 Gm37846-201ENSMUST00000191840 3774 ntBASIC6.68□□□□□ -1.34
Nup98Q6PFD9 Gm18852-201ENSMUST00000184149 3593 ntBASIC6.68□□□□□ -1.34
Nup98Q6PFD9 Gm6818-201ENSMUST00000190556 2558 ntBASIC6.68□□□□□ -1.34
Nup98Q6PFD9 A730020M07Rik-202ENSMUST00000196621 2370 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Nup98Q6PFD9 AC158232.1-201ENSMUST00000217882 2071 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Nup98Q6PFD9 Itpr1-205ENSMUST00000203615 9761 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
Nup98Q6PFD9 Gm45632-201ENSMUST00000211532 1888 ntBASIC6.68□□□□□ -1.34
Nup98Q6PFD9 Zfp931-201ENSMUST00000108923 1372 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Nup98Q6PFD9 Gm16007-201ENSMUST00000117837 286 ntBASIC6.68□□□□□ -1.34
Nup98Q6PFD9 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Nup98Q6PFD9 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
Nup98Q6PFD9 Gm27754-201ENSMUST00000183340 126 ntBASIC6.68□□□□□ -1.34
Nup98Q6PFD9 Gm37421-201ENSMUST00000193088 132 ntBASIC6.68□□□□□ -1.34
Nup98Q6PFD9 Gm18036-201ENSMUST00000195256 272 ntBASIC6.68□□□□□ -1.34
Nup98Q6PFD9 AC154452.1-201ENSMUST00000225819 241 ntBASIC6.68□□□□□ -1.34
Nup98Q6PFD9 AC160120.1-201ENSMUST00000227446 663 ntBASIC6.68□□□□□ -1.34
Nup98Q6PFD9 Gm44439-201ENSMUST00000203379 3592 ntBASIC6.68□□□□□ -1.34
Nup98Q6PFD9 Gm45477-201ENSMUST00000200213 5498 ntBASIC6.68□□□□□ -1.34
Nup98Q6PFD9 Rxfp1-201ENSMUST00000078527 5382 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Nup98Q6PFD9 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Nup98Q6PFD9 Hsp90aa1-201ENSMUST00000021698 2852 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Nup98Q6PFD9 Olfr610-203ENSMUST00000217627 1643 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Nup98Q6PFD9 Gm44255-201ENSMUST00000203456 2053 ntBASIC6.68□□□□□ -1.34
Nup98Q6PFD9 Aktip-204ENSMUST00000120426 1687 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Nup98Q6PFD9 C230071H17Rik-201ENSMUST00000196044 2973 ntBASIC6.67□□□□□ -1.34
Nup98Q6PFD9 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Nup98Q6PFD9 Gm11975-201ENSMUST00000118772 481 ntBASIC6.67□□□□□ -1.34
Nup98Q6PFD9 Gm12336-201ENSMUST00000125962 322 ntTSL 3 BASIC6.67□□□□□ -1.34
Nup98Q6PFD9 Gm11802-201ENSMUST00000137749 653 ntTSL 3 BASIC6.67□□□□□ -1.34
Nup98Q6PFD9 Gm16725-201ENSMUST00000138744 1253 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Nup98Q6PFD9 Gm11636-201ENSMUST00000152172 774 ntTSL 2 BASIC6.67□□□□□ -1.34
Nup98Q6PFD9 Scarna6-201ENSMUST00000158656 265 ntBASIC6.67□□□□□ -1.34
Nup98Q6PFD9 Gm7609-204ENSMUST00000161424 461 ntBASIC6.67□□□□□ -1.34
Nup98Q6PFD9 Gm26970-201ENSMUST00000182990 964 ntBASIC6.67□□□□□ -1.34
Nup98Q6PFD9 Gm28683-201ENSMUST00000187134 615 ntBASIC6.67□□□□□ -1.34
Nup98Q6PFD9 Gm28061-201ENSMUST00000189085 807 ntBASIC6.67□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms