Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Gm38277-201ENSMUST00000195172 1367 ntBASIC6.08□□□□□ -1.44
Usp39Q3TIX9 AC169038.1-201ENSMUST00000227378 1352 ntBASIC6.08□□□□□ -1.44
Usp39Q3TIX9 Tmprss11f-201ENSMUST00000116553 3605 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Usp39Q3TIX9 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Usp39Q3TIX9 Mfap1a-201ENSMUST00000089926 4198 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Usp39Q3TIX9 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
Usp39Q3TIX9 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Usp39Q3TIX9 Gm24790-201ENSMUST00000104285 132 ntBASIC6.08□□□□□ -1.44
Usp39Q3TIX9 Mup3-203ENSMUST00000107488 984 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Usp39Q3TIX9 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Usp39Q3TIX9 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Usp39Q3TIX9 Gm14580-201ENSMUST00000119122 718 ntBASIC6.08□□□□□ -1.44
Usp39Q3TIX9 Gm16511-201ENSMUST00000120019 564 ntBASIC6.08□□□□□ -1.44
Usp39Q3TIX9 Gm12825-201ENSMUST00000120249 563 ntBASIC6.08□□□□□ -1.44
Usp39Q3TIX9 Gm14925-201ENSMUST00000120611 438 ntBASIC6.08□□□□□ -1.44
Usp39Q3TIX9 Gm11925-201ENSMUST00000121375 535 ntBASIC6.08□□□□□ -1.44
Usp39Q3TIX9 Gm12444-201ENSMUST00000121512 877 ntBASIC6.08□□□□□ -1.44
Usp39Q3TIX9 Gm16249-201ENSMUST00000124055 1258 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Usp39Q3TIX9 Gm14410-202ENSMUST00000133301 1113 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
Usp39Q3TIX9 Tmem216-205ENSMUST00000145210 774 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Usp39Q3TIX9 Gm15230-201ENSMUST00000153701 510 ntTSL 2 BASIC6.08□□□□□ -1.44
Usp39Q3TIX9 Gm23674-201ENSMUST00000157473 131 ntBASIC6.08□□□□□ -1.44
Usp39Q3TIX9 Gm25550-201ENSMUST00000158079 128 ntBASIC6.08□□□□□ -1.44
Usp39Q3TIX9 Gm23386-201ENSMUST00000158585 144 ntBASIC6.08□□□□□ -1.44
Usp39Q3TIX9 Gm15898-201ENSMUST00000162213 627 ntTSL 3 BASIC6.08□□□□□ -1.44
Usp39Q3TIX9 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC6.08□□□□□ -1.44
Usp39Q3TIX9 Vmn1r-ps80-201ENSMUST00000174838 966 ntBASIC6.08□□□□□ -1.44
Usp39Q3TIX9 Vmn1r-ps21-201ENSMUST00000176891 925 ntBASIC6.08□□□□□ -1.44
Usp39Q3TIX9 7630403G23Rik-201ENSMUST00000184229 1084 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Usp39Q3TIX9 Snhg14-202ENSMUST00000185693 734 ntTSL 5 BASIC6.08□□□□□ -1.44
Usp39Q3TIX9 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Usp39Q3TIX9 Gm29385-201ENSMUST00000186831 363 ntBASIC6.08□□□□□ -1.44
Usp39Q3TIX9 Gm29594-201ENSMUST00000191181 398 ntTSL 5 BASIC6.08□□□□□ -1.44
Usp39Q3TIX9 Gm29478-201ENSMUST00000191272 688 ntTSL 3 BASIC6.08□□□□□ -1.44
Usp39Q3TIX9 Gm5853-201ENSMUST00000197183 632 ntBASIC6.08□□□□□ -1.44
Usp39Q3TIX9 1700015C17Rik-201ENSMUST00000197297 239 ntTSL 5 BASIC6.08□□□□□ -1.44
Usp39Q3TIX9 Gm43762-201ENSMUST00000201521 295 ntBASIC6.08□□□□□ -1.44
Usp39Q3TIX9 Gm44282-201ENSMUST00000203199 190 ntBASIC6.08□□□□□ -1.44
Usp39Q3TIX9 Gm31897-202ENSMUST00000206231 604 ntTSL 3 BASIC6.08□□□□□ -1.44
Usp39Q3TIX9 Olfr65-202ENSMUST00000209528 1106 ntAPPRIS P2 BASIC6.08□□□□□ -1.44
Usp39Q3TIX9 Gm45551-201ENSMUST00000211459 928 ntBASIC6.08□□□□□ -1.44
Usp39Q3TIX9 Olfr949-ps1-201ENSMUST00000215546 949 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Usp39Q3TIX9 AC122901.2-201ENSMUST00000216926 285 ntBASIC6.08□□□□□ -1.44
Usp39Q3TIX9 Gm18586-201ENSMUST00000217265 518 ntBASIC6.08□□□□□ -1.44
Usp39Q3TIX9 AC155941.3-201ENSMUST00000218476 308 ntBASIC6.08□□□□□ -1.44
Usp39Q3TIX9 AC073562.1-201ENSMUST00000222117 401 ntBASIC6.08□□□□□ -1.44
Usp39Q3TIX9 AC131187.2-201ENSMUST00000223936 994 ntBASIC6.08□□□□□ -1.44
Usp39Q3TIX9 AC154239.2-201ENSMUST00000227859 233 ntBASIC6.08□□□□□ -1.44
Usp39Q3TIX9 Olfr344-201ENSMUST00000075474 930 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Usp39Q3TIX9 Vmn1r237-201ENSMUST00000077301 950 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Usp39Q3TIX9 Olfr493-201ENSMUST00000080106 945 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Usp39Q3TIX9 Gm22864-201ENSMUST00000083950 130 ntBASIC6.08□□□□□ -1.44
Usp39Q3TIX9 Gm36947-201ENSMUST00000194709 2249 ntBASIC6.08□□□□□ -1.44
Usp39Q3TIX9 AC159244.3-201ENSMUST00000222887 3153 ntBASIC6.08□□□□□ -1.44
Usp39Q3TIX9 Olfr1204-202ENSMUST00000213283 6935 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Usp39Q3TIX9 Gm7048-201ENSMUST00000199395 1891 ntBASIC6.08□□□□□ -1.44
Usp39Q3TIX9 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Usp39Q3TIX9 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC6.08□□□□□ -1.44
Usp39Q3TIX9 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Usp39Q3TIX9 Yae1d1-201ENSMUST00000099735 8744 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Usp39Q3TIX9 Olfr204-202ENSMUST00000216261 5371 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
Usp39Q3TIX9 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Usp39Q3TIX9 AC154841.1-201ENSMUST00000227263 1479 ntBASIC6.08□□□□□ -1.44
Usp39Q3TIX9 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Usp39Q3TIX9 4930544L04Rik-202ENSMUST00000211181 3204 ntBASIC6.08□□□□□ -1.44
Usp39Q3TIX9 Olfr350-202ENSMUST00000214457 2022 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Usp39Q3TIX9 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Usp39Q3TIX9 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Usp39Q3TIX9 Gm38257-201ENSMUST00000195881 2761 ntBASIC6.07□□□□□ -1.44
Usp39Q3TIX9 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC6.07□□□□□ -1.44
Usp39Q3TIX9 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC6.07□□□□□ -1.44
Usp39Q3TIX9 Oas2-202ENSMUST00000081491 3961 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Usp39Q3TIX9 Igkv5-43-201ENSMUST00000103368 379 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Usp39Q3TIX9 Gm12790-201ENSMUST00000106916 951 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Usp39Q3TIX9 Sult2a4-201ENSMUST00000108520 984 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Usp39Q3TIX9 Gm14444-201ENSMUST00000109069 919 ntTSL 2 BASIC6.07□□□□□ -1.44
Usp39Q3TIX9 Gm8569-201ENSMUST00000117630 647 ntBASIC6.07□□□□□ -1.44
Usp39Q3TIX9 Gm11462-201ENSMUST00000117749 562 ntBASIC6.07□□□□□ -1.44
Usp39Q3TIX9 Gm13455-201ENSMUST00000118767 517 ntBASIC6.07□□□□□ -1.44
Usp39Q3TIX9 Oosp3-202ENSMUST00000119053 621 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Usp39Q3TIX9 Nlk-ps1-201ENSMUST00000120843 1230 ntBASIC6.07□□□□□ -1.44
Usp39Q3TIX9 Gm15750-201ENSMUST00000120970 616 ntBASIC6.07□□□□□ -1.44
Usp39Q3TIX9 Gm2012-201ENSMUST00000121900 1131 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Usp39Q3TIX9 Gm4660-201ENSMUST00000131499 403 ntBASIC6.07□□□□□ -1.44
Usp39Q3TIX9 Nudt12os-202ENSMUST00000152750 849 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Usp39Q3TIX9 Gm16026-202ENSMUST00000159695 772 ntBASIC6.07□□□□□ -1.44
Usp39Q3TIX9 Gm3140-201ENSMUST00000163523 481 ntBASIC6.07□□□□□ -1.44
Usp39Q3TIX9 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC6.07□□□□□ -1.44
Usp39Q3TIX9 Mir5617-201ENSMUST00000176786 57 ntBASIC6.07□□□□□ -1.44
Usp39Q3TIX9 Mir7685-201ENSMUST00000183555 62 ntBASIC6.07□□□□□ -1.44
Usp39Q3TIX9 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC6.07□□□□□ -1.44
Usp39Q3TIX9 Gm37059-201ENSMUST00000191723 678 ntTSL 5 BASIC6.07□□□□□ -1.44
Usp39Q3TIX9 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Usp39Q3TIX9 AC122844.1-201ENSMUST00000195971 107 ntBASIC6.07□□□□□ -1.44
Usp39Q3TIX9 Obox4-ps7-201ENSMUST00000196144 505 ntBASIC6.07□□□□□ -1.44
Usp39Q3TIX9 Gm43576-201ENSMUST00000197937 871 ntBASIC6.07□□□□□ -1.44
Usp39Q3TIX9 Gm43708-201ENSMUST00000198857 961 ntBASIC6.07□□□□□ -1.44
Usp39Q3TIX9 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC6.07□□□□□ -1.44
Usp39Q3TIX9 Epgn-202ENSMUST00000202724 805 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Usp39Q3TIX9 Gm44138-201ENSMUST00000204939 271 ntBASIC6.07□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms