Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC3.81□□□□□ -1.8
PrkdcP97313 Gm27896-201ENSMUST00000175162 317 ntBASIC3.81□□□□□ -1.8
PrkdcP97313 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PrkdcP97313 Olfr1225-201ENSMUST00000188861 1027 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
PrkdcP97313 Pinc-202ENSMUST00000190487 961 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PrkdcP97313 Olfr1077-ps1-201ENSMUST00000213225 1212 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
PrkdcP97313 Olfr1084-201ENSMUST00000216851 961 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
PrkdcP97313 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC3.81□□□□□ -1.8
PrkdcP97313 Gm31063-201ENSMUST00000222636 580 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PrkdcP97313 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PrkdcP97313 Myo16-202ENSMUST00000207204 6719 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PrkdcP97313 Gm45861-201ENSMUST00000209669 7184 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
PrkdcP97313 Olfr1393-202ENSMUST00000213323 3010 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
PrkdcP97313 Cep295-203ENSMUST00000098979 7188 ntAPPRIS P2 TSL 5 BASIC3.81□□□□□ -1.8
PrkdcP97313 Gm43175-201ENSMUST00000198450 3810 ntBASIC3.81□□□□□ -1.8
PrkdcP97313 Gm14367-201ENSMUST00000119214 1497 ntBASIC3.81□□□□□ -1.8
PrkdcP97313 Btbd35f8-201ENSMUST00000180004 1497 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
PrkdcP97313 Kmo-201ENSMUST00000040250 2695 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
PrkdcP97313 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PrkdcP97313 Prom1-205ENSMUST00000165909 4089 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
PrkdcP97313 Gm40518-202ENSMUST00000214538 4080 ntTSL 5 BASIC3.81□□□□□ -1.8
PrkdcP97313 Obox5-201ENSMUST00000098802 1831 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PrkdcP97313 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PrkdcP97313 Gm7269-201ENSMUST00000210819 1373 ntBASIC3.81□□□□□ -1.8
PrkdcP97313 Grik2-202ENSMUST00000105484 3992 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PrkdcP97313 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
PrkdcP97313 Polr2a-201ENSMUST00000058470 6740 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PrkdcP97313 Stat4-202ENSMUST00000168302 2662 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PrkdcP97313 Gm13590-201ENSMUST00000120183 1588 ntBASIC3.81□□□□□ -1.8
PrkdcP97313 Cers4-201ENSMUST00000008350 9475 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PrkdcP97313 Trav10-201ENSMUST00000103583 406 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
PrkdcP97313 Gm14753-201ENSMUST00000118503 246 ntBASIC3.81□□□□□ -1.8
PrkdcP97313 Gm11510-201ENSMUST00000120278 347 ntBASIC3.81□□□□□ -1.8
PrkdcP97313 Gm14620-201ENSMUST00000120656 383 ntBASIC3.81□□□□□ -1.8
PrkdcP97313 Gm13232-201ENSMUST00000121816 632 ntBASIC3.81□□□□□ -1.8
PrkdcP97313 Scarna13-201ENSMUST00000158164 275 ntBASIC3.81□□□□□ -1.8
PrkdcP97313 Pafah1b1-ps1-201ENSMUST00000181263 1046 ntBASIC3.81□□□□□ -1.8
PrkdcP97313 Gm39363-201ENSMUST00000214251 723 ntTSL 3 BASIC3.81□□□□□ -1.8
PrkdcP97313 Scp2d1-201ENSMUST00000028918 760 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
PrkdcP97313 Mbd4-202ENSMUST00000122816 2415 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PrkdcP97313 Fam26d-202ENSMUST00000218239 3075 ntBASIC3.81□□□□□ -1.8
PrkdcP97313 Adgrl2-213ENSMUST00000199059 4637 ntTSL 5 BASIC3.81□□□□□ -1.8
PrkdcP97313 Dab2-204ENSMUST00000110664 4450 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
PrkdcP97313 Pogz-204ENSMUST00000107269 5966 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
PrkdcP97313 BC065397-203ENSMUST00000134066 3201 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PrkdcP97313 Txlnb-201ENSMUST00000037964 4422 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PrkdcP97313 Gm6503-201ENSMUST00000210829 2225 ntBASIC3.81□□□□□ -1.8
PrkdcP97313 Epb41l5-202ENSMUST00000052404 6442 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PrkdcP97313 AU022252-203ENSMUST00000141112 7151 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PrkdcP97313 Rreb1-201ENSMUST00000037232 8395 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
PrkdcP97313 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC3.8□□□□□ -1.8
PrkdcP97313 Gm14158-201ENSMUST00000118409 308 ntBASIC3.8□□□□□ -1.8
PrkdcP97313 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PrkdcP97313 Fbxw27-201ENSMUST00000197125 810 ntAPPRIS P2 TSL 3 BASIC3.8□□□□□ -1.8
PrkdcP97313 4930443G03Rik-201ENSMUST00000203475 1282 ntBASIC3.8□□□□□ -1.8
PrkdcP97313 AC102603.1-201ENSMUST00000227481 584 ntBASIC3.8□□□□□ -1.8
PrkdcP97313 Oxr1-201ENSMUST00000022918 4232 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PrkdcP97313 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
PrkdcP97313 Gm37078-201ENSMUST00000193314 2009 ntBASIC3.8□□□□□ -1.8
PrkdcP97313 Rbfox1-201ENSMUST00000056416 4084 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PrkdcP97313 Zfp606-205ENSMUST00000209403 2211 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
PrkdcP97313 Clca3b-201ENSMUST00000159989 3361 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PrkdcP97313 Ash1l-202ENSMUST00000186583 11644 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
PrkdcP97313 Nup214-201ENSMUST00000065398 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PrkdcP97313 Adcy10-202ENSMUST00000111439 5193 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
PrkdcP97313 Gm7903-202ENSMUST00000179953 3519 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
PrkdcP97313 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PrkdcP97313 Olfr384-202ENSMUST00000214228 2576 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
PrkdcP97313 Lmbrd1-201ENSMUST00000095062 5228 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PrkdcP97313 Gm42885-201ENSMUST00000200763 4214 ntBASIC3.8□□□□□ -1.8
PrkdcP97313 Rgs7-207ENSMUST00000195324 2209 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
PrkdcP97313 Kdm5a-201ENSMUST00000005108 10944 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
PrkdcP97313 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PrkdcP97313 Zfp989-202ENSMUST00000146688 2295 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PrkdcP97313 5430421F17Rik-202ENSMUST00000210268 2295 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PrkdcP97313 Gm44586-201ENSMUST00000207166 2737 ntBASIC3.8□□□□□ -1.8
PrkdcP97313 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC3.8□□□□□ -1.8
PrkdcP97313 Gm23594-201ENSMUST00000104307 134 ntBASIC3.8□□□□□ -1.8
PrkdcP97313 Gm13740-201ENSMUST00000120590 310 ntBASIC3.8□□□□□ -1.8
PrkdcP97313 Gm13808-201ENSMUST00000121353 184 ntBASIC3.8□□□□□ -1.8
PrkdcP97313 Gm25913-201ENSMUST00000157617 135 ntBASIC3.8□□□□□ -1.8
PrkdcP97313 Gm24103-201ENSMUST00000174930 77 ntBASIC3.8□□□□□ -1.8
PrkdcP97313 Gm22650-201ENSMUST00000175138 105 ntBASIC3.8□□□□□ -1.8
PrkdcP97313 Vmn1r82-202ENSMUST00000191002 918 ntBASIC3.8□□□□□ -1.8
PrkdcP97313 Gm44474-201ENSMUST00000196525 127 ntBASIC3.8□□□□□ -1.8
PrkdcP97313 Gm33651-201ENSMUST00000200405 456 ntTSL 5 BASIC3.8□□□□□ -1.8
PrkdcP97313 AC123064.1-201ENSMUST00000218950 406 ntBASIC3.8□□□□□ -1.8
PrkdcP97313 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC3.8□□□□□ -1.8
PrkdcP97313 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC3.8□□□□□ -1.8
PrkdcP97313 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PrkdcP97313 Gm14895-201ENSMUST00000121858 1361 ntBASIC3.8□□□□□ -1.8
PrkdcP97313 Zfp932-202ENSMUST00000112536 2509 ntTSL 5 BASIC3.8□□□□□ -1.8
PrkdcP97313 Ehf-203ENSMUST00000111176 3696 ntTSL 5 BASIC3.8□□□□□ -1.8
PrkdcP97313 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PrkdcP97313 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PrkdcP97313 Gm10552-201ENSMUST00000113396 372 ntBASIC3.8□□□□□ -1.8
PrkdcP97313 Gm14628-201ENSMUST00000117508 635 ntBASIC3.8□□□□□ -1.8
PrkdcP97313 Gm15754-201ENSMUST00000119191 478 ntBASIC3.8□□□□□ -1.8
PrkdcP97313 Klra14-ps-201ENSMUST00000119532 802 ntBASIC3.8□□□□□ -1.8
PrkdcP97313 Gm23465-201ENSMUST00000157134 262 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms