Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 4933400C23Rik-201ENSMUST00000188610 1708 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Cdh11P55288 Tinag-201ENSMUST00000034911 1726 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Cdh11P55288 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC5.36□□□□□ -1.55
Cdh11P55288 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC5.36□□□□□ -1.55
Cdh11P55288 Gm37137-201ENSMUST00000195138 2684 ntBASIC5.36□□□□□ -1.55
Cdh11P55288 Amd2-201ENSMUST00000080898 3218 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Cdh11P55288 Epha4-204ENSMUST00000188797 3612 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Cdh11P55288 CT009733.2-202ENSMUST00000224171 4748 ntBASIC5.36□□□□□ -1.55
Cdh11P55288 Dnajc13-203ENSMUST00000186788 6747 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Cdh11P55288 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Cdh11P55288 Olfr448-203ENSMUST00000214529 2764 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Cdh11P55288 Clec2i-203ENSMUST00000159866 2330 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Cdh11P55288 Gm39321-201ENSMUST00000216597 2075 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Cdh11P55288 Olfr983-202ENSMUST00000213087 6196 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
Cdh11P55288 Gm9521-201ENSMUST00000206656 1516 ntBASIC5.35□□□□□ -1.55
Cdh11P55288 Gm5949-201ENSMUST00000213468 1421 ntBASIC5.35□□□□□ -1.55
Cdh11P55288 Aadac-201ENSMUST00000029325 1324 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Cdh11P55288 Dtna-203ENSMUST00000220904 3860 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Cdh11P55288 Gm14510-201ENSMUST00000116165 1092 ntBASIC5.35□□□□□ -1.55
Cdh11P55288 Gm16007-201ENSMUST00000117837 286 ntBASIC5.35□□□□□ -1.55
Cdh11P55288 Gm14712-201ENSMUST00000120195 772 ntBASIC5.35□□□□□ -1.55
Cdh11P55288 Gm13121-201ENSMUST00000120637 632 ntBASIC5.35□□□□□ -1.55
Cdh11P55288 Gm11423-201ENSMUST00000136051 655 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Cdh11P55288 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC5.35□□□□□ -1.55
Cdh11P55288 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC5.35□□□□□ -1.55
Cdh11P55288 Znrf1-215ENSMUST00000174454 494 ntTSL 3 BASIC5.35□□□□□ -1.55
Cdh11P55288 Scarletltr-201ENSMUST00000176950 305 ntTSL 5 BASIC5.35□□□□□ -1.55
Cdh11P55288 Pdzph1-203ENSMUST00000177360 950 ntTSL 5 BASIC5.35□□□□□ -1.55
Cdh11P55288 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Cdh11P55288 Gm27153-201ENSMUST00000184492 407 ntTSL 2 BASIC5.35□□□□□ -1.55
Cdh11P55288 Frmd8os-202ENSMUST00000187697 516 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Cdh11P55288 Gm29482-201ENSMUST00000187845 230 ntTSL 3 BASIC5.35□□□□□ -1.55
Cdh11P55288 Gm8241-201ENSMUST00000189286 816 ntBASIC5.35□□□□□ -1.55
Cdh11P55288 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC5.35□□□□□ -1.55
Cdh11P55288 D3Ertd751e-212ENSMUST00000194346 744 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
Cdh11P55288 Gm38133-201ENSMUST00000195109 815 ntTSL 5 BASIC5.35□□□□□ -1.55
Cdh11P55288 Gm37614-201ENSMUST00000195645 210 ntBASIC5.35□□□□□ -1.55
Cdh11P55288 Gm38343-201ENSMUST00000195786 1060 ntTSL 5 BASIC5.35□□□□□ -1.55
Cdh11P55288 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC5.35□□□□□ -1.55
Cdh11P55288 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Cdh11P55288 Gm43126-201ENSMUST00000201546 429 ntTSL 3 BASIC5.35□□□□□ -1.55
Cdh11P55288 Gm18290-201ENSMUST00000202900 844 ntBASIC5.35□□□□□ -1.55
Cdh11P55288 Gm5306-201ENSMUST00000203325 757 ntBASIC5.35□□□□□ -1.55
Cdh11P55288 Gm5886-202ENSMUST00000203957 522 ntBASIC5.35□□□□□ -1.55
Cdh11P55288 Gm1000-201ENSMUST00000220520 801 ntTSL 3 BASIC5.35□□□□□ -1.55
Cdh11P55288 Gm34165-201ENSMUST00000222012 1174 ntBASIC5.35□□□□□ -1.55
Cdh11P55288 AC122459.2-201ENSMUST00000227099 638 ntBASIC5.35□□□□□ -1.55
Cdh11P55288 AC166105.1-201ENSMUST00000227512 482 ntBASIC5.35□□□□□ -1.55
Cdh11P55288 Psma4-201ENSMUST00000034848 1165 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Cdh11P55288 Gm24454-201ENSMUST00000083349 132 ntBASIC5.35□□□□□ -1.55
Cdh11P55288 Fmo9-201ENSMUST00000027843 3065 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Cdh11P55288 Gm29438-201ENSMUST00000191298 2613 ntBASIC5.35□□□□□ -1.55
Cdh11P55288 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC5.35□□□□□ -1.55
Cdh11P55288 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Cdh11P55288 Ugt8a-203ENSMUST00000198610 3762 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Cdh11P55288 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Cdh11P55288 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Cdh11P55288 Gm37773-201ENSMUST00000194141 2120 ntBASIC5.35□□□□□ -1.55
Cdh11P55288 Vmn1r45-204ENSMUST00000227426 3205 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Cdh11P55288 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
Cdh11P55288 Gm12388-201ENSMUST00000119112 1887 ntBASIC5.34□□□□□ -1.55
Cdh11P55288 Adgb-205ENSMUST00000179956 5218 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
Cdh11P55288 Gm42798-201ENSMUST00000200853 3972 ntBASIC5.34□□□□□ -1.55
Cdh11P55288 6430511E19Rik-201ENSMUST00000192772 3835 ntBASIC5.34□□□□□ -1.55
Cdh11P55288 Gm42676-201ENSMUST00000197609 2686 ntBASIC5.34□□□□□ -1.55
Cdh11P55288 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
Cdh11P55288 E330034G19Rik-203ENSMUST00000161740 1544 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Cdh11P55288 AC156025.2-201ENSMUST00000225907 1533 ntBASIC5.34□□□□□ -1.55
Cdh11P55288 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Cdh11P55288 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
Cdh11P55288 Cyp4a28-ps-201ENSMUST00000121884 1477 ntBASIC5.34□□□□□ -1.55
Cdh11P55288 Gm37735-201ENSMUST00000193995 1406 ntBASIC5.34□□□□□ -1.55
Cdh11P55288 Olfr984-204ENSMUST00000217536 5114 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
Cdh11P55288 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
Cdh11P55288 Olfr1171-ps1-202ENSMUST00000150178 1398 ntTSL 3 BASIC5.34□□□□□ -1.55
Cdh11P55288 4933439N06Rik-201ENSMUST00000203062 1365 ntBASIC5.34□□□□□ -1.55
Cdh11P55288 Scp2-ps2-203ENSMUST00000216438 1370 ntBASIC5.34□□□□□ -1.55
Cdh11P55288 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
Cdh11P55288 Igkv1-99-201ENSMUST00000103326 359 ntAPPRIS ALT2 BASIC5.34□□□□□ -1.55
Cdh11P55288 Gm23294-201ENSMUST00000104150 164 ntBASIC5.34□□□□□ -1.55
Cdh11P55288 Gm25917-201ENSMUST00000104267 130 ntBASIC5.34□□□□□ -1.55
Cdh11P55288 Taf7l-202ENSMUST00000113223 1155 ntTSL 5 BASIC5.34□□□□□ -1.55
Cdh11P55288 Gm14925-201ENSMUST00000120611 438 ntBASIC5.34□□□□□ -1.55
Cdh11P55288 Gm15801-201ENSMUST00000120920 522 ntBASIC5.34□□□□□ -1.55
Cdh11P55288 Gm15237-201ENSMUST00000122104 469 ntBASIC5.34□□□□□ -1.55
Cdh11P55288 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC5.34□□□□□ -1.55
Cdh11P55288 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Cdh11P55288 Gm23082-201ENSMUST00000157852 133 ntBASIC5.34□□□□□ -1.55
Cdh11P55288 Gm24363-201ENSMUST00000158440 311 ntBASIC5.34□□□□□ -1.55
Cdh11P55288 Gm16132-201ENSMUST00000159296 598 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Cdh11P55288 Gm8783-201ENSMUST00000159764 522 ntBASIC5.34□□□□□ -1.55
Cdh11P55288 Runx2os3-201ENSMUST00000160203 738 ntTSL 3 BASIC5.34□□□□□ -1.55
Cdh11P55288 Speer4cos-201ENSMUST00000162113 1083 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Cdh11P55288 Gm8582-201ENSMUST00000164061 789 ntBASIC5.34□□□□□ -1.55
Cdh11P55288 Gm9027-201ENSMUST00000165914 661 ntBASIC5.34□□□□□ -1.55
Cdh11P55288 Znrd1-203ENSMUST00000172823 454 ntTSL 5 BASIC5.34□□□□□ -1.55
Cdh11P55288 Gm23450-201ENSMUST00000178285 91 ntBASIC5.34□□□□□ -1.55
Cdh11P55288 Mir6361-201ENSMUST00000185079 101 ntBASIC5.34□□□□□ -1.55
Cdh11P55288 1600010M07Rik-201ENSMUST00000185931 1204 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Cdh11P55288 Snhg14-205ENSMUST00000186345 456 ntTSL 5 BASIC5.34□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 83.6 ms