Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Gm42513-201ENSMUST00000197831 2119 ntBASIC7.38□□□□□ -1.23
Msh6P54276 Gm43229-201ENSMUST00000201812 1850 ntBASIC7.38□□□□□ -1.23
Msh6P54276 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Msh6P54276 Rsrc2-203ENSMUST00000111515 4223 ntTSL 5 BASIC7.38□□□□□ -1.23
Msh6P54276 Mrps25-203ENSMUST00000140438 6073 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Msh6P54276 Itpr1-205ENSMUST00000203615 9761 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
Msh6P54276 Phf6-203ENSMUST00000154864 3057 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Msh6P54276 Tcp1-ps1-201ENSMUST00000120941 1466 ntBASIC7.37□□□□□ -1.23
Msh6P54276 Gm37078-201ENSMUST00000193314 2009 ntBASIC7.37□□□□□ -1.23
Msh6P54276 Gm26514-201ENSMUST00000181087 4231 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Msh6P54276 Gm36099-201ENSMUST00000221946 1798 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Msh6P54276 CT025604.1-201ENSMUST00000221111 3436 ntBASIC7.37□□□□□ -1.23
Msh6P54276 Olfr1504-202ENSMUST00000209192 1514 ntAPPRIS P1 TSL 3 BASIC7.37□□□□□ -1.23
Msh6P54276 Fpr3-202ENSMUST00000115565 1220 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Msh6P54276 Atf1-ps-201ENSMUST00000120608 810 ntBASIC7.37□□□□□ -1.23
Msh6P54276 Gm7879-201ENSMUST00000122204 774 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Msh6P54276 Gm23233-201ENSMUST00000157301 137 ntBASIC7.37□□□□□ -1.23
Msh6P54276 Gm17149-201ENSMUST00000164712 375 ntBASIC7.37□□□□□ -1.23
Msh6P54276 Gm9006-201ENSMUST00000165520 841 ntBASIC7.37□□□□□ -1.23
Msh6P54276 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Msh6P54276 Snhg6-205ENSMUST00000182819 816 ntTSL 2 BASIC7.37□□□□□ -1.23
Msh6P54276 Mir6417-201ENSMUST00000183815 116 ntBASIC7.37□□□□□ -1.23
Msh6P54276 1700029M03Rik-202ENSMUST00000187517 357 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Msh6P54276 Gm37716-201ENSMUST00000193553 947 ntBASIC7.37□□□□□ -1.23
Msh6P54276 Gm19739-201ENSMUST00000195941 153 ntBASIC7.37□□□□□ -1.23
Msh6P54276 Gm44456-201ENSMUST00000196554 89 ntBASIC7.37□□□□□ -1.23
Msh6P54276 Gm44108-201ENSMUST00000203525 422 ntBASIC7.37□□□□□ -1.23
Msh6P54276 Gm45075-201ENSMUST00000208426 649 ntTSL 3 BASIC7.37□□□□□ -1.23
Msh6P54276 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC7.37□□□□□ -1.23
Msh6P54276 AC153961.2-201ENSMUST00000218877 164 ntBASIC7.37□□□□□ -1.23
Msh6P54276 AC142227.2-201ENSMUST00000220675 400 ntTSL 5 BASIC7.37□□□□□ -1.23
Msh6P54276 5033424D13Rik-201ENSMUST00000221779 648 ntBASIC7.37□□□□□ -1.23
Msh6P54276 Gm36423-204ENSMUST00000222446 541 ntTSL 2 BASIC7.37□□□□□ -1.23
Msh6P54276 Clec2j-201ENSMUST00000032517 515 ntBASIC7.37□□□□□ -1.23
Msh6P54276 Glod5-201ENSMUST00000033503 673 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Msh6P54276 Agr3-201ENSMUST00000042101 826 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Msh6P54276 Fpr3-201ENSMUST00000054871 1268 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Msh6P54276 Olfr599-201ENSMUST00000098201 1050 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Msh6P54276 Gm37553-201ENSMUST00000194135 1602 ntBASIC7.37□□□□□ -1.23
Msh6P54276 Arhgef12-201ENSMUST00000072767 10059 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Msh6P54276 Gm6125-201ENSMUST00000217983 3472 ntBASIC7.37□□□□□ -1.23
Msh6P54276 Gm3608-201ENSMUST00000086725 2858 ntBASIC7.37□□□□□ -1.23
Msh6P54276 Gm44843-201ENSMUST00000208320 1396 ntBASIC7.37□□□□□ -1.23
Msh6P54276 Prom1-208ENSMUST00000179059 3579 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
Msh6P54276 Gm38362-201ENSMUST00000192999 2064 ntBASIC7.37□□□□□ -1.23
Msh6P54276 Zscan4b-201ENSMUST00000168158 1754 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Msh6P54276 Gm14367-201ENSMUST00000119214 1497 ntBASIC7.37□□□□□ -1.23
Msh6P54276 Btbd35f9-201ENSMUST00000178219 1497 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Msh6P54276 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Msh6P54276 Btbd35f30-201ENSMUST00000179069 1497 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Msh6P54276 Btbd35f25-201ENSMUST00000179086 1497 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Msh6P54276 Btbd35f6-201ENSMUST00000179466 1497 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Msh6P54276 Btbd35f29-201ENSMUST00000179532 1497 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Msh6P54276 Btbd35f8-201ENSMUST00000180004 1497 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Msh6P54276 Btbd35f26-201ENSMUST00000180197 1497 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Msh6P54276 Zfp825-203ENSMUST00000221173 1549 ntAPPRIS ALT2 TSL 3 BASIC7.36□□□□□ -1.23
Msh6P54276 Arhgap15-201ENSMUST00000055776 2604 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Msh6P54276 Olfr1085-202ENSMUST00000213279 5191 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Msh6P54276 Gm25422-201ENSMUST00000104219 129 ntBASIC7.36□□□□□ -1.23
Msh6P54276 Cypt1-202ENSMUST00000115422 661 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Msh6P54276 Gm6427-201ENSMUST00000118721 979 ntBASIC7.36□□□□□ -1.23
Msh6P54276 Tmem27-201ENSMUST00000015545 1262 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Msh6P54276 Gm24940-201ENSMUST00000158326 108 ntBASIC7.36□□□□□ -1.23
Msh6P54276 Gm8358-201ENSMUST00000167222 555 ntBASIC7.36□□□□□ -1.23
Msh6P54276 Gm17511-201ENSMUST00000172206 342 ntBASIC7.36□□□□□ -1.23
Msh6P54276 Mir3471-2-201ENSMUST00000174896 102 ntBASIC7.36□□□□□ -1.23
Msh6P54276 Mir5103-201ENSMUST00000175111 79 ntBASIC7.36□□□□□ -1.23
Msh6P54276 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC7.36□□□□□ -1.23
Msh6P54276 Olfr1215-201ENSMUST00000188399 943 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Msh6P54276 Gm28429-201ENSMUST00000188521 363 ntBASIC7.36□□□□□ -1.23
Msh6P54276 Gm5244-202ENSMUST00000189517 743 ntBASIC7.36□□□□□ -1.23
Msh6P54276 Gm42646-201ENSMUST00000202233 914 ntBASIC7.36□□□□□ -1.23
Msh6P54276 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC7.36□□□□□ -1.23
Msh6P54276 Rpl38-201ENSMUST00000077915 364 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Msh6P54276 Fpr-rs6-201ENSMUST00000095636 1020 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Msh6P54276 Spink13-201ENSMUST00000097557 796 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Msh6P54276 Sspo-201ENSMUST00000043676 15148 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
Msh6P54276 Luzp1-201ENSMUST00000001116 7246 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Msh6P54276 Csnk1g1-201ENSMUST00000034949 7208 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Msh6P54276 Gm6902-201ENSMUST00000179072 1335 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Msh6P54276 Gm8141-201ENSMUST00000190856 1723 ntBASIC7.36□□□□□ -1.23
Msh6P54276 AC116950.1-201ENSMUST00000226322 3250 ntBASIC7.36□□□□□ -1.23
Msh6P54276 CT025686.2-201ENSMUST00000227898 3315 ntBASIC7.36□□□□□ -1.23
Msh6P54276 Gm5594-201ENSMUST00000172712 1429 ntBASIC7.36□□□□□ -1.23
Msh6P54276 Olfr1360-203ENSMUST00000216083 2315 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Msh6P54276 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Msh6P54276 AC159244.3-201ENSMUST00000222887 3153 ntBASIC7.36□□□□□ -1.23
Msh6P54276 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
Msh6P54276 Ect2-203ENSMUST00000108300 4086 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Msh6P54276 E330034G19Rik-203ENSMUST00000161740 1544 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Msh6P54276 Olfr127-202ENSMUST00000217223 3733 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Msh6P54276 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
Msh6P54276 Serpinb6b-202ENSMUST00000110293 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Msh6P54276 Gm20075-201ENSMUST00000220449 2161 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Msh6P54276 Gm22273-201ENSMUST00000104040 132 ntBASIC7.35□□□□□ -1.23
Msh6P54276 Gm7670-201ENSMUST00000121272 641 ntBASIC7.35□□□□□ -1.23
Msh6P54276 Gm11381-201ENSMUST00000138574 420 ntTSL 5 BASIC7.35□□□□□ -1.23
Msh6P54276 Gm29570-201ENSMUST00000185813 681 ntTSL 3 BASIC7.35□□□□□ -1.23
Msh6P54276 Gng12-208ENSMUST00000204511 739 ntTSL 5 BASIC7.35□□□□□ -1.23
Msh6P54276 4930591E09Rik-201ENSMUST00000215643 480 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 93 ms