Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm37967-201ENSMUST00000195634 2665 ntBASIC8.79□□□□□ -1
Cux1P53564 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Cux1P53564 Adgrb3-201ENSMUST00000041838 5059 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Cux1P53564 Zfp994-201ENSMUST00000179996 4880 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Cux1P53564 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
Cux1P53564 Gm37531-201ENSMUST00000191628 5415 ntBASIC8.79□□□□□ -1
Cux1P53564 Sbf2-208ENSMUST00000166020 5481 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
Cux1P53564 Pm20d1-202ENSMUST00000112393 6900 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Cux1P53564 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Cux1P53564 Gm37685-201ENSMUST00000193507 2177 ntBASIC8.79□□□□□ -1
Cux1P53564 Prl2b1-202ENSMUST00000102954 870 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
Cux1P53564 Rnf148-201ENSMUST00000104979 1239 ntAPPRIS P1 BASIC8.79□□□□□ -1
Cux1P53564 Gm16089-201ENSMUST00000117679 336 ntBASIC8.79□□□□□ -1
Cux1P53564 Gm12734-201ENSMUST00000120228 948 ntBASIC8.79□□□□□ -1
Cux1P53564 Olfr213-201ENSMUST00000121958 984 ntAPPRIS P1 BASIC8.79□□□□□ -1
Cux1P53564 Gm3727-201ENSMUST00000168458 995 ntAPPRIS P5 TSL 5 BASIC8.79□□□□□ -1
Cux1P53564 Gm23872-201ENSMUST00000175432 77 ntBASIC8.79□□□□□ -1
Cux1P53564 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC8.79□□□□□ -1
Cux1P53564 Gm29736-201ENSMUST00000198189 385 ntBASIC8.79□□□□□ -1
Cux1P53564 Gm44516-201ENSMUST00000208794 833 ntTSL 5 BASIC8.79□□□□□ -1
Cux1P53564 AC154755.1-201ENSMUST00000225244 537 ntBASIC8.79□□□□□ -1
Cux1P53564 Pik3c2g-201ENSMUST00000032353 1206 ntTSL 5 BASIC8.79□□□□□ -1
Cux1P53564 Orm3-201ENSMUST00000006687 773 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Cux1P53564 Zfp606-205ENSMUST00000209403 2211 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
Cux1P53564 Olfr15-202ENSMUST00000214238 6135 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Cux1P53564 Pum1-202ENSMUST00000097862 3991 ntAPPRIS ALT1 TSL 1 (best) BASIC8.79□□□□□ -1
Cux1P53564 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Cux1P53564 Nr3c2-202ENSMUST00000109911 3804 ntTSL 5 BASIC8.78□□□□□ -1
Cux1P53564 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC8.78□□□□□ -1
Cux1P53564 Rad21l-202ENSMUST00000180195 1659 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
Cux1P53564 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Cux1P53564 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Cux1P53564 Nusap1-201ENSMUST00000028771 3526 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Cux1P53564 Gm24265-201ENSMUST00000101833 141 ntBASIC8.78□□□□□ -1
Cux1P53564 Gm13023-202ENSMUST00000105770 833 ntAPPRIS ALT2 TSL 2 BASIC8.78□□□□□ -1
Cux1P53564 Hbb-bh2-201ENSMUST00000106866 558 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Cux1P53564 Gm25430-201ENSMUST00000157614 289 ntBASIC8.78□□□□□ -1
Cux1P53564 Gm22312-201ENSMUST00000158005 130 ntBASIC8.78□□□□□ -1
Cux1P53564 Gm8256-201ENSMUST00000169178 453 ntBASIC8.78□□□□□ -1
Cux1P53564 Gm22122-201ENSMUST00000175147 200 ntBASIC8.78□□□□□ -1
Cux1P53564 Gm24407-201ENSMUST00000177864 141 ntBASIC8.78□□□□□ -1
Cux1P53564 Gm10251-201ENSMUST00000178788 384 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Cux1P53564 Gm28683-201ENSMUST00000187134 615 ntBASIC8.78□□□□□ -1
Cux1P53564 Olfr1246-201ENSMUST00000187990 1078 ntAPPRIS P1 BASIC8.78□□□□□ -1
Cux1P53564 Gm28840-205ENSMUST00000189320 615 ntBASIC8.78□□□□□ -1
Cux1P53564 Gm28835-203ENSMUST00000190062 615 ntBASIC8.78□□□□□ -1
Cux1P53564 AC238676.3-201ENSMUST00000223042 154 ntBASIC8.78□□□□□ -1
Cux1P53564 Olfr732-201ENSMUST00000071208 1044 ntAPPRIS P1 BASIC8.78□□□□□ -1
Cux1P53564 AC153955.2-201ENSMUST00000216739 4129 ntTSL 1 (best) BASIC8.78□□□□□ -1
Cux1P53564 Mageb18-201ENSMUST00000088137 1571 ntAPPRIS P1 BASIC8.78□□□□□ -1
Cux1P53564 Trim5-202ENSMUST00000098179 3655 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
Cux1P53564 Gm43180-201ENSMUST00000197541 2886 ntBASIC8.78□□□□□ -1
Cux1P53564 Fam196b-201ENSMUST00000093192 5031 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Cux1P53564 Ttf1-201ENSMUST00000100237 4160 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Cux1P53564 Klkb1-201ENSMUST00000026907 5249 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Cux1P53564 Smc1a-201ENSMUST00000045312 4691 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Cux1P53564 Gm19272-201ENSMUST00000184133 1753 ntTSL 1 (best) BASIC8.77□□□□□ -1
Cux1P53564 Amot-202ENSMUST00000112836 6957 ntAPPRIS P2 TSL 5 BASIC8.77□□□□□ -1
Cux1P53564 Pcdh15-204ENSMUST00000105426 6802 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1.01
Cux1P53564 Ncoa7-208ENSMUST00000215926 2875 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Cux1P53564 Gm37106-201ENSMUST00000193760 1532 ntBASIC8.77□□□□□ -1.01
Cux1P53564 Trim75-201ENSMUST00000095295 3273 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Cux1P53564 Mageb16-ps1-201ENSMUST00000117991 1127 ntBASIC8.77□□□□□ -1.01
Cux1P53564 Gm13333-201ENSMUST00000119424 781 ntBASIC8.77□□□□□ -1.01
Cux1P53564 Gm25176-201ENSMUST00000122640 125 ntBASIC8.77□□□□□ -1.01
Cux1P53564 Gm9499-201ENSMUST00000180888 964 ntBASIC8.77□□□□□ -1.01
Cux1P53564 Gm7688-201ENSMUST00000212857 337 ntBASIC8.77□□□□□ -1.01
Cux1P53564 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC8.77□□□□□ -1.01
Cux1P53564 Gm18904-201ENSMUST00000218756 329 ntBASIC8.77□□□□□ -1.01
Cux1P53564 CT025616.1-201ENSMUST00000221158 412 ntBASIC8.77□□□□□ -1.01
Cux1P53564 CT010575.2-201ENSMUST00000222876 496 ntTSL 2 BASIC8.77□□□□□ -1.01
Cux1P53564 AC160120.1-201ENSMUST00000227446 663 ntBASIC8.77□□□□□ -1.01
Cux1P53564 Olfr655-201ENSMUST00000057385 927 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Cux1P53564 Cep170-212ENSMUST00000194727 6784 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1.01
Cux1P53564 Gm45520-201ENSMUST00000210109 2031 ntBASIC8.77□□□□□ -1.01
Cux1P53564 Lrif1-203ENSMUST00000106736 1669 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Cux1P53564 Gm38362-201ENSMUST00000192999 2064 ntBASIC8.77□□□□□ -1.01
Cux1P53564 Itih4-204ENSMUST00000168782 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Cux1P53564 Trappc8-206ENSMUST00000225661 5191 ntAPPRIS ALT2 BASIC8.77□□□□□ -1.01
Cux1P53564 Gm37762-201ENSMUST00000194515 3561 ntBASIC8.77□□□□□ -1.01
Cux1P53564 Magea5-202ENSMUST00000169540 1563 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Cux1P53564 Grik2-202ENSMUST00000105484 3992 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Cux1P53564 Oas2-202ENSMUST00000081491 3961 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Cux1P53564 Gm11636-201ENSMUST00000152172 774 ntTSL 2 BASIC8.76□□□□□ -1.01
Cux1P53564 Gm16060-201ENSMUST00000153140 478 ntBASIC8.76□□□□□ -1.01
Cux1P53564 4933417A18Rik-201ENSMUST00000160279 1045 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Cux1P53564 6330403N20Rik-201ENSMUST00000180467 1189 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Cux1P53564 Gm27541-201ENSMUST00000184078 122 ntBASIC8.76□□□□□ -1.01
Cux1P53564 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Cux1P53564 AC079644.3-201ENSMUST00000222452 357 ntBASIC8.76□□□□□ -1.01
Cux1P53564 Gm18247-201ENSMUST00000222937 601 ntBASIC8.76□□□□□ -1.01
Cux1P53564 Olfr248-201ENSMUST00000075329 1010 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
Cux1P53564 Fam49a-202ENSMUST00000069066 9452 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Cux1P53564 Chek1-201ENSMUST00000034625 3397 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Cux1P53564 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Cux1P53564 Gm44209-201ENSMUST00000204556 4153 ntBASIC8.76□□□□□ -1.01
Cux1P53564 Fam26d-202ENSMUST00000218239 3075 ntBASIC8.76□□□□□ -1.01
Cux1P53564 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Cux1P53564 Olfr694-203ENSMUST00000216118 5035 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Cux1P53564 S100pbp-201ENSMUST00000049081 2769 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 94.1 ms