Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm29289-201ENSMUST00000188358 576 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Shmt1P50431 Gm6693-201ENSMUST00000189583 813 ntBASIC6.5□□□□□ -1.37
Shmt1P50431 Gm28396-201ENSMUST00000190309 379 ntBASIC6.5□□□□□ -1.37
Shmt1P50431 Gm37241-201ENSMUST00000191736 523 ntBASIC6.5□□□□□ -1.37
Shmt1P50431 Gm37632-201ENSMUST00000191811 1142 ntBASIC6.5□□□□□ -1.37
Shmt1P50431 Gm37774-201ENSMUST00000194401 245 ntBASIC6.5□□□□□ -1.37
Shmt1P50431 Gm44206-201ENSMUST00000203044 592 ntTSL 5 BASIC6.5□□□□□ -1.37
Shmt1P50431 Gm4872-201ENSMUST00000205210 1299 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Shmt1P50431 Gm5065-202ENSMUST00000207531 807 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
Shmt1P50431 Gm45247-201ENSMUST00000210757 309 ntBASIC6.5□□□□□ -1.37
Shmt1P50431 Gm45479-201ENSMUST00000211613 802 ntTSL 3 BASIC6.5□□□□□ -1.37
Shmt1P50431 Gm45724-201ENSMUST00000213031 420 ntBASIC6.5□□□□□ -1.37
Shmt1P50431 AC155941.1-201ENSMUST00000220223 529 ntBASIC6.5□□□□□ -1.37
Shmt1P50431 AC119894.1-201ENSMUST00000220399 350 ntBASIC6.5□□□□□ -1.37
Shmt1P50431 Smim15-202ENSMUST00000223808 808 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Shmt1P50431 AC168880.1-201ENSMUST00000225113 707 ntBASIC6.5□□□□□ -1.37
Shmt1P50431 AC154184.2-201ENSMUST00000225335 349 ntBASIC6.5□□□□□ -1.37
Shmt1P50431 AC108945.1-201ENSMUST00000226477 94 ntBASIC6.5□□□□□ -1.37
Shmt1P50431 CT010505.1-201ENSMUST00000227026 396 ntBASIC6.5□□□□□ -1.37
Shmt1P50431 Olfr714-201ENSMUST00000054629 954 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Shmt1P50431 Olfr1026-201ENSMUST00000056718 965 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Shmt1P50431 Olfr960-201ENSMUST00000077060 1067 ntAPPRIS P2 BASIC6.5□□□□□ -1.37
Shmt1P50431 Olfr493-201ENSMUST00000080106 945 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Shmt1P50431 Fpr-rs7-201ENSMUST00000095637 1017 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Shmt1P50431 Gm94-201ENSMUST00000096570 748 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Shmt1P50431 Gm26984-201ENSMUST00000182345 3510 ntBASIC6.5□□□□□ -1.37
Shmt1P50431 Rnf219-201ENSMUST00000022716 3420 ntAPPRIS P2 TSL 3 BASIC6.5□□□□□ -1.37
Shmt1P50431 Gm10648-201ENSMUST00000207552 2902 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Shmt1P50431 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
Shmt1P50431 AC154630.1-201ENSMUST00000215334 2440 ntBASIC6.5□□□□□ -1.37
Shmt1P50431 C030017G13Rik-201ENSMUST00000202959 2331 ntBASIC6.5□□□□□ -1.37
Shmt1P50431 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Shmt1P50431 Magi2-207ENSMUST00000197553 3264 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Shmt1P50431 Olfr907-203ENSMUST00000214264 1910 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Shmt1P50431 Robo2-210ENSMUST00000226478 8059 ntBASIC6.5□□□□□ -1.37
Shmt1P50431 Cyp2c68-201ENSMUST00000099472 1724 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Shmt1P50431 Serpinb1c-201ENSMUST00000021834 1633 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Shmt1P50431 Gm37967-201ENSMUST00000195634 2665 ntBASIC6.5□□□□□ -1.37
Shmt1P50431 Gm29502-201ENSMUST00000185979 3739 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Shmt1P50431 2310002F09Rik-202ENSMUST00000181551 2468 ntTSL 5 BASIC6.5□□□□□ -1.37
Shmt1P50431 Gm31121-201ENSMUST00000197948 1413 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Shmt1P50431 Gm12051-201ENSMUST00000147771 1341 ntTSL 5 BASIC6.5□□□□□ -1.37
Shmt1P50431 Psd3-201ENSMUST00000038959 11319 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
Shmt1P50431 Gm15354-201ENSMUST00000132019 1772 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Shmt1P50431 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC6.49□□□□□ -1.37
Shmt1P50431 Elmo1-202ENSMUST00000180626 2020 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Shmt1P50431 4931423N10Rik-202ENSMUST00000114505 1392 ntTSL 5 BASIC6.49□□□□□ -1.37
Shmt1P50431 F13b-201ENSMUST00000027615 2379 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Shmt1P50431 Smarca2-246ENSMUST00000209085 1841 ntTSL 5 BASIC6.49□□□□□ -1.37
Shmt1P50431 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Shmt1P50431 Gm22370-201ENSMUST00000102422 83 ntBASIC6.49□□□□□ -1.37
Shmt1P50431 Gm25415-201ENSMUST00000104220 132 ntBASIC6.49□□□□□ -1.37
Shmt1P50431 n-R5s16-201ENSMUST00000104555 119 ntBASIC6.49□□□□□ -1.37
Shmt1P50431 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
Shmt1P50431 Gm15754-201ENSMUST00000119191 478 ntBASIC6.49□□□□□ -1.37
Shmt1P50431 Gm24685-201ENSMUST00000157764 285 ntBASIC6.49□□□□□ -1.37
Shmt1P50431 Gm26487-201ENSMUST00000158022 94 ntBASIC6.49□□□□□ -1.37
Shmt1P50431 Gm26167-201ENSMUST00000158423 253 ntBASIC6.49□□□□□ -1.37
Shmt1P50431 Gm23773-201ENSMUST00000158985 296 ntBASIC6.49□□□□□ -1.37
Shmt1P50431 Glipr1-204ENSMUST00000162508 1183 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Shmt1P50431 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC6.49□□□□□ -1.37
Shmt1P50431 V1rd19-201ENSMUST00000173571 1157 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Shmt1P50431 Gm24081-201ENSMUST00000175177 125 ntBASIC6.49□□□□□ -1.37
Shmt1P50431 Gm23633-201ENSMUST00000175293 119 ntBASIC6.49□□□□□ -1.37
Shmt1P50431 Gm6055-201ENSMUST00000180532 378 ntBASIC6.49□□□□□ -1.37
Shmt1P50431 Snhg14-202ENSMUST00000185693 734 ntTSL 5 BASIC6.49□□□□□ -1.37
Shmt1P50431 Gm28503-201ENSMUST00000185966 147 ntBASIC6.49□□□□□ -1.37
Shmt1P50431 Gm8367-201ENSMUST00000186145 887 ntBASIC6.49□□□□□ -1.37
Shmt1P50431 Gm28614-201ENSMUST00000186483 458 ntBASIC6.49□□□□□ -1.37
Shmt1P50431 Gm28356-202ENSMUST00000187566 858 ntBASIC6.49□□□□□ -1.37
Shmt1P50431 Gm28501-201ENSMUST00000188729 421 ntTSL 2 BASIC6.49□□□□□ -1.37
Shmt1P50431 Gm44353-201ENSMUST00000200618 138 ntBASIC6.49□□□□□ -1.37
Shmt1P50431 Gm44988-201ENSMUST00000203835 1161 ntBASIC6.49□□□□□ -1.37
Shmt1P50431 AC122905.1-201ENSMUST00000218181 456 ntTSL 5 BASIC6.49□□□□□ -1.37
Shmt1P50431 AC168274.2-201ENSMUST00000219252 338 ntTSL 5 BASIC6.49□□□□□ -1.37
Shmt1P50431 Asf1a-204ENSMUST00000219271 725 ntTSL 5 BASIC6.49□□□□□ -1.37
Shmt1P50431 AC121137.1-201ENSMUST00000225272 602 ntBASIC6.49□□□□□ -1.37
Shmt1P50431 AC154718.1-201ENSMUST00000226676 250 ntBASIC6.49□□□□□ -1.37
Shmt1P50431 Gstk1-201ENSMUST00000031897 930 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Shmt1P50431 4930550C14Rik-201ENSMUST00000005262 1237 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Shmt1P50431 1700013H16Rik-201ENSMUST00000067940 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Shmt1P50431 Defb42-201ENSMUST00000067990 618 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Shmt1P50431 Gm9958-201ENSMUST00000068250 1284 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Shmt1P50431 Gm24041-201ENSMUST00000083115 156 ntBASIC6.49□□□□□ -1.37
Shmt1P50431 Olfr1208-201ENSMUST00000099810 1075 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Shmt1P50431 Zranb2-202ENSMUST00000106057 2737 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
Shmt1P50431 Pnpla8-202ENSMUST00000122902 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Shmt1P50431 Haus2-202ENSMUST00000110706 3055 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Shmt1P50431 Gm45601-201ENSMUST00000211483 6753 ntTSL 5 BASIC6.49□□□□□ -1.37
Shmt1P50431 Gm42994-201ENSMUST00000195964 2549 ntBASIC6.49□□□□□ -1.37
Shmt1P50431 Gm45001-201ENSMUST00000208279 2515 ntBASIC6.49□□□□□ -1.37
Shmt1P50431 Ppargc1a-203ENSMUST00000132734 6464 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Shmt1P50431 Nedd4-207ENSMUST00000184333 4034 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Shmt1P50431 Mef2c-223ENSMUST00000199105 4361 ntTSL 5 BASIC6.49□□□□□ -1.37
Shmt1P50431 Homez-201ENSMUST00000081162 5609 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Shmt1P50431 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Shmt1P50431 Gm37735-201ENSMUST00000193995 1406 ntBASIC6.49□□□□□ -1.37
Shmt1P50431 4933436I01Rik-201ENSMUST00000026325 1426 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Shmt1P50431 Gm37894-201ENSMUST00000195416 2599 ntBASIC6.49□□□□□ -1.37
Shmt1P50431 Pcdh15-204ENSMUST00000105426 6802 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms