Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm22149-202ENSMUST00000196259 137 ntBASIC7.8□□□□□ -1.16
Rfx1P48377 1110060G06Rik-201ENSMUST00000200372 499 ntBASIC7.8□□□□□ -1.16
Rfx1P48377 Nts-201ENSMUST00000020040 1248 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Rfx1P48377 Gm30954-201ENSMUST00000208715 1210 ntTSL 5 BASIC7.8□□□□□ -1.16
Rfx1P48377 Gm38430-201ENSMUST00000209888 1240 ntBASIC7.8□□□□□ -1.16
Rfx1P48377 Gm36247-201ENSMUST00000211834 285 ntBASIC7.8□□□□□ -1.16
Rfx1P48377 Gm34005-201ENSMUST00000215834 282 ntBASIC7.8□□□□□ -1.16
Rfx1P48377 AC116726.2-201ENSMUST00000217629 986 ntBASIC7.8□□□□□ -1.16
Rfx1P48377 Gm46203-201ENSMUST00000218130 478 ntBASIC7.8□□□□□ -1.16
Rfx1P48377 4930471E15Rik-201ENSMUST00000221147 626 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Rfx1P48377 Mplkip-202ENSMUST00000221480 582 ntTSL 5 BASIC7.8□□□□□ -1.16
Rfx1P48377 AC122486.1-201ENSMUST00000221562 196 ntTSL 2 BASIC7.8□□□□□ -1.16
Rfx1P48377 AC163667.1-201ENSMUST00000225201 1289 ntBASIC7.8□□□□□ -1.16
Rfx1P48377 AC154506.3-201ENSMUST00000225417 213 ntBASIC7.8□□□□□ -1.16
Rfx1P48377 CT030254.1-201ENSMUST00000225450 1078 ntBASIC7.8□□□□□ -1.16
Rfx1P48377 Tas2r108-201ENSMUST00000038750 1013 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Rfx1P48377 Tas2r105-201ENSMUST00000053652 964 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Rfx1P48377 Fpr3-201ENSMUST00000054871 1268 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Rfx1P48377 Odf3l1-201ENSMUST00000055036 1080 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Rfx1P48377 Olfr743-201ENSMUST00000071294 936 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Rfx1P48377 Gm25135-201ENSMUST00000082648 143 ntBASIC7.8□□□□□ -1.16
Rfx1P48377 Gm24150-201ENSMUST00000082759 104 ntBASIC7.8□□□□□ -1.16
Rfx1P48377 n-R5s89-201ENSMUST00000083532 104 ntBASIC7.8□□□□□ -1.16
Rfx1P48377 Olfr1407-ps1-201ENSMUST00000085885 797 ntBASIC7.8□□□□□ -1.16
Rfx1P48377 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Rfx1P48377 Olfr1348-209ENSMUST00000213549 2714 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Rfx1P48377 Pdzph1-201ENSMUST00000025064 4174 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Rfx1P48377 Pde1a-203ENSMUST00000102652 1646 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Rfx1P48377 Olfr122-204ENSMUST00000217119 2224 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Rfx1P48377 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Rfx1P48377 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Rfx1P48377 Olfr813-202ENSMUST00000204622 2410 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Rfx1P48377 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC7.8□□□□□ -1.16
Rfx1P48377 Olfr121-202ENSMUST00000174675 1494 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Rfx1P48377 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC7.8□□□□□ -1.16
Rfx1P48377 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC7.8□□□□□ -1.16
Rfx1P48377 Prox1-202ENSMUST00000175916 7913 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Rfx1P48377 Il7r-204ENSMUST00000228782 3516 ntAPPRIS ALT2 BASIC7.79□□□□□ -1.16
Rfx1P48377 AC190403.1-201ENSMUST00000224515 1325 ntBASIC7.79□□□□□ -1.16
Rfx1P48377 Snx10-207ENSMUST00000179365 2464 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Rfx1P48377 Mbd3l2-202ENSMUST00000213777 2116 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Rfx1P48377 Sorbs2-209ENSMUST00000132139 4644 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
Rfx1P48377 Gm43031-201ENSMUST00000198500 1887 ntBASIC7.79□□□□□ -1.16
Rfx1P48377 Gm42967-201ENSMUST00000198647 2312 ntBASIC7.79□□□□□ -1.16
Rfx1P48377 Cyld-206ENSMUST00000209559 4476 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
Rfx1P48377 Meg3-209ENSMUST00000146701 14548 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Rfx1P48377 Cntn5-202ENSMUST00000160216 4192 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Rfx1P48377 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Rfx1P48377 Gip-201ENSMUST00000103156 607 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Rfx1P48377 Gm13469-201ENSMUST00000118231 350 ntBASIC7.79□□□□□ -1.16
Rfx1P48377 Gm14729-201ENSMUST00000118373 689 ntBASIC7.79□□□□□ -1.16
Rfx1P48377 Gm13640-201ENSMUST00000118445 264 ntBASIC7.79□□□□□ -1.16
Rfx1P48377 Oosp3-202ENSMUST00000119053 621 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Rfx1P48377 Gm14991-201ENSMUST00000119913 598 ntBASIC7.79□□□□□ -1.16
Rfx1P48377 Gm12873-201ENSMUST00000119988 422 ntBASIC7.79□□□□□ -1.16
Rfx1P48377 Olfr1147-ps1-201ENSMUST00000122179 913 ntBASIC7.79□□□□□ -1.16
Rfx1P48377 2310044K18Rik-201ENSMUST00000125131 618 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Rfx1P48377 1700054M17Rik-201ENSMUST00000125654 445 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Rfx1P48377 Gm12145-201ENSMUST00000142108 217 ntTSL 3 BASIC7.79□□□□□ -1.16
Rfx1P48377 Gm25962-201ENSMUST00000157173 168 ntBASIC7.79□□□□□ -1.16
Rfx1P48377 Gm22820-201ENSMUST00000157205 329 ntBASIC7.79□□□□□ -1.16
Rfx1P48377 Gm24130-201ENSMUST00000158536 151 ntBASIC7.79□□□□□ -1.16
Rfx1P48377 Gm26179-201ENSMUST00000177723 132 ntBASIC7.79□□□□□ -1.16
Rfx1P48377 Gm27970-201ENSMUST00000184854 407 ntBASIC7.79□□□□□ -1.16
Rfx1P48377 1810053B23Rik-202ENSMUST00000185364 590 ntTSL 3 BASIC7.79□□□□□ -1.16
Rfx1P48377 1700104B16Rik-202ENSMUST00000187948 722 ntTSL 2 BASIC7.79□□□□□ -1.16
Rfx1P48377 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Rfx1P48377 Gm28190-201ENSMUST00000189766 722 ntBASIC7.79□□□□□ -1.16
Rfx1P48377 Gm2979-201ENSMUST00000193442 463 ntBASIC7.79□□□□□ -1.16
Rfx1P48377 Gm18952-201ENSMUST00000194471 846 ntBASIC7.79□□□□□ -1.16
Rfx1P48377 Gm36986-201ENSMUST00000195320 353 ntBASIC7.79□□□□□ -1.16
Rfx1P48377 Gm21006-201ENSMUST00000196930 667 ntBASIC7.79□□□□□ -1.16
Rfx1P48377 Gm22711-202ENSMUST00000197029 135 ntBASIC7.79□□□□□ -1.16
Rfx1P48377 Gm42164-201ENSMUST00000198881 379 ntBASIC7.79□□□□□ -1.16
Rfx1P48377 Gm31693-201ENSMUST00000200150 909 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Rfx1P48377 Gm9375-201ENSMUST00000208899 903 ntBASIC7.79□□□□□ -1.16
Rfx1P48377 AC147782.1-201ENSMUST00000219169 475 ntBASIC7.79□□□□□ -1.16
Rfx1P48377 Gm4052-201ENSMUST00000220890 451 ntBASIC7.79□□□□□ -1.16
Rfx1P48377 Gm35558-202ENSMUST00000221819 499 ntBASIC7.79□□□□□ -1.16
Rfx1P48377 Hspe1-ps1-201ENSMUST00000222955 330 ntBASIC7.79□□□□□ -1.16
Rfx1P48377 Gnrh1-202ENSMUST00000223929 428 ntBASIC7.79□□□□□ -1.16
Rfx1P48377 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Rfx1P48377 Olfr107-201ENSMUST00000077008 1033 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Rfx1P48377 Defa37-201ENSMUST00000084040 403 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Rfx1P48377 Gm17199-201ENSMUST00000097296 416 ntBASIC7.79□□□□□ -1.16
Rfx1P48377 Olfr1241-201ENSMUST00000099778 945 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Rfx1P48377 Vmn1r181-204ENSMUST00000227637 4587 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Rfx1P48377 2410012E07Rik-201ENSMUST00000190896 1357 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Rfx1P48377 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Rfx1P48377 Gm18908-201ENSMUST00000207125 1483 ntBASIC7.79□□□□□ -1.16
Rfx1P48377 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Rfx1P48377 Foxp2-204ENSMUST00000115472 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Rfx1P48377 Gm5157-201ENSMUST00000185914 1581 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Rfx1P48377 Olfr305-202ENSMUST00000213255 3749 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Rfx1P48377 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC7.79□□□□□ -1.16
Rfx1P48377 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Rfx1P48377 Gm15425-201ENSMUST00000119013 2711 ntBASIC7.79□□□□□ -1.16
Rfx1P48377 Fsbp-201ENSMUST00000180239 4358 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Rfx1P48377 Olfr50-203ENSMUST00000217041 1507 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Rfx1P48377 Il5-201ENSMUST00000048605 1537 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 84.2 ms