Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm45070-201ENSMUST00000208100 246 ntBASIC5.58□□□□□ -1.52
Cdx2P43241 Axdnd1-210ENSMUST00000212747 1238 ntTSL 5 BASIC5.58□□□□□ -1.52
Cdx2P43241 Gm18587-201ENSMUST00000213736 841 ntBASIC5.58□□□□□ -1.52
Cdx2P43241 Ss18l2-204ENSMUST00000215104 315 ntTSL 5 BASIC5.58□□□□□ -1.52
Cdx2P43241 Gm18601-201ENSMUST00000220831 634 ntBASIC5.58□□□□□ -1.52
Cdx2P43241 Otor-201ENSMUST00000028902 949 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Cdx2P43241 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Cdx2P43241 Olfr1406-201ENSMUST00000072395 1063 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Cdx2P43241 Olfr1305-201ENSMUST00000099608 939 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Cdx2P43241 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Cdx2P43241 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Cdx2P43241 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Cdx2P43241 Gm3608-201ENSMUST00000086725 2858 ntBASIC5.58□□□□□ -1.52
Cdx2P43241 Gm16092-201ENSMUST00000161449 2405 ntTSL 5 BASIC5.58□□□□□ -1.52
Cdx2P43241 Dnm3os-201ENSMUST00000139662 7928 ntBASIC5.58□□□□□ -1.52
Cdx2P43241 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Cdx2P43241 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Cdx2P43241 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC5.58□□□□□ -1.52
Cdx2P43241 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
Cdx2P43241 Gm45762-201ENSMUST00000212863 2619 ntBASIC5.58□□□□□ -1.52
Cdx2P43241 Mgam2-ps-201ENSMUST00000195870 3745 ntBASIC5.58□□□□□ -1.52
Cdx2P43241 Syt4-201ENSMUST00000025110 3901 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Cdx2P43241 Akap4-203ENSMUST00000115751 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Cdx2P43241 Adam30-201ENSMUST00000050342 3510 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Cdx2P43241 AW554918-201ENSMUST00000036619 5257 ntAPPRIS P5 TSL 5 BASIC5.57□□□□□ -1.52
Cdx2P43241 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Cdx2P43241 Zgrf1-203ENSMUST00000196141 6932 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Cdx2P43241 Dtna-206ENSMUST00000221880 4490 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
Cdx2P43241 Gm43503-201ENSMUST00000200033 3408 ntBASIC5.57□□□□□ -1.52
Cdx2P43241 Olfr1247-202ENSMUST00000111532 6070 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Cdx2P43241 Zfand6-201ENSMUST00000069537 1658 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Cdx2P43241 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Cdx2P43241 Gm43088-201ENSMUST00000197530 2347 ntBASIC5.57□□□□□ -1.52
Cdx2P43241 Rsrc2-201ENSMUST00000050827 2344 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Cdx2P43241 Dock2-202ENSMUST00000101364 1616 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Cdx2P43241 Gm18853-201ENSMUST00000183629 3596 ntBASIC5.57□□□□□ -1.52
Cdx2P43241 Cep57l1-204ENSMUST00000186239 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Cdx2P43241 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Cdx2P43241 Mtus1-205ENSMUST00000118835 6426 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Cdx2P43241 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Cdx2P43241 Fpr3-202ENSMUST00000115565 1220 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Cdx2P43241 Hbb-bh3-201ENSMUST00000118954 266 ntBASIC5.57□□□□□ -1.52
Cdx2P43241 Gm12074-201ENSMUST00000120189 219 ntBASIC5.57□□□□□ -1.52
Cdx2P43241 Gm13488-201ENSMUST00000120419 179 ntBASIC5.57□□□□□ -1.52
Cdx2P43241 Gm13259-201ENSMUST00000120792 456 ntBASIC5.57□□□□□ -1.52
Cdx2P43241 Rhox3b-ps-201ENSMUST00000121045 868 ntBASIC5.57□□□□□ -1.52
Cdx2P43241 Mettl5os-201ENSMUST00000129114 667 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Cdx2P43241 Gm14233-201ENSMUST00000149576 439 ntTSL 3 BASIC5.57□□□□□ -1.52
Cdx2P43241 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC5.57□□□□□ -1.52
Cdx2P43241 Gm24692-201ENSMUST00000157761 146 ntBASIC5.57□□□□□ -1.52
Cdx2P43241 Gm22311-201ENSMUST00000158006 110 ntBASIC5.57□□□□□ -1.52
Cdx2P43241 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC5.57□□□□□ -1.52
Cdx2P43241 Gm23806-201ENSMUST00000175157 109 ntBASIC5.57□□□□□ -1.52
Cdx2P43241 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC5.57□□□□□ -1.52
Cdx2P43241 Mir6417-201ENSMUST00000183815 116 ntBASIC5.57□□□□□ -1.52
Cdx2P43241 4930519F24Rik-201ENSMUST00000185764 579 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Cdx2P43241 Gm28610-201ENSMUST00000187716 406 ntTSL 2 BASIC5.57□□□□□ -1.52
Cdx2P43241 Gm28429-201ENSMUST00000188521 363 ntBASIC5.57□□□□□ -1.52
Cdx2P43241 Gm28061-201ENSMUST00000189085 807 ntBASIC5.57□□□□□ -1.52
Cdx2P43241 Gm37184-201ENSMUST00000194720 650 ntTSL 3 BASIC5.57□□□□□ -1.52
Cdx2P43241 Gm43390-201ENSMUST00000196614 421 ntBASIC5.57□□□□□ -1.52
Cdx2P43241 Gm29755-201ENSMUST00000196976 948 ntBASIC5.57□□□□□ -1.52
Cdx2P43241 Gm42437-201ENSMUST00000197263 923 ntBASIC5.57□□□□□ -1.52
Cdx2P43241 Gm43126-201ENSMUST00000201546 429 ntTSL 3 BASIC5.57□□□□□ -1.52
Cdx2P43241 Gm4874-201ENSMUST00000203589 691 ntBASIC5.57□□□□□ -1.52
Cdx2P43241 Tas2r111-ps2-201ENSMUST00000203794 901 ntBASIC5.57□□□□□ -1.52
Cdx2P43241 Gm18689-201ENSMUST00000203969 902 ntBASIC5.57□□□□□ -1.52
Cdx2P43241 Gm44184-201ENSMUST00000204290 132 ntBASIC5.57□□□□□ -1.52
Cdx2P43241 Api5-ps-201ENSMUST00000206607 577 ntBASIC5.57□□□□□ -1.52
Cdx2P43241 Gm10610-203ENSMUST00000208877 1206 ntTSL 5 BASIC5.57□□□□□ -1.52
Cdx2P43241 AC153971.1-201ENSMUST00000215097 3811 ntBASIC5.57□□□□□ -1.52
Cdx2P43241 AC154636.1-201ENSMUST00000223226 126 ntBASIC5.57□□□□□ -1.52
Cdx2P43241 AC154755.1-201ENSMUST00000225244 537 ntBASIC5.57□□□□□ -1.52
Cdx2P43241 AC164315.1-201ENSMUST00000226452 708 ntBASIC5.57□□□□□ -1.52
Cdx2P43241 AL607142.1-201ENSMUST00000226560 78 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Cdx2P43241 Cst12-201ENSMUST00000028932 644 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Cdx2P43241 Fpr3-201ENSMUST00000054871 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Cdx2P43241 Morn2-201ENSMUST00000061703 644 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Cdx2P43241 Gm23624-201ENSMUST00000082463 321 ntBASIC5.57□□□□□ -1.52
Cdx2P43241 Gabrg1-201ENSMUST00000031119 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Cdx2P43241 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Cdx2P43241 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Cdx2P43241 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Cdx2P43241 Gm5662-201ENSMUST00000101168 1840 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Cdx2P43241 B020004C17Rik-201ENSMUST00000178161 2385 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Cdx2P43241 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Cdx2P43241 AC154841.1-201ENSMUST00000227263 1479 ntBASIC5.57□□□□□ -1.52
Cdx2P43241 Olfr1338-202ENSMUST00000214922 2947 ntAPPRIS ALT1 TSL 5 BASIC5.57□□□□□ -1.52
Cdx2P43241 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Cdx2P43241 Creb5-212ENSMUST00000205120 7482 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Cdx2P43241 Gm42727-201ENSMUST00000202446 2823 ntBASIC5.56□□□□□ -1.52
Cdx2P43241 Gm38263-201ENSMUST00000195879 3059 ntBASIC5.56□□□□□ -1.52
Cdx2P43241 B230303O12Rik-201ENSMUST00000199119 3645 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Cdx2P43241 Olfr1309-204ENSMUST00000215045 5236 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Cdx2P43241 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Cdx2P43241 AC114585.1-201ENSMUST00000228080 3680 ntBASIC5.56□□□□□ -1.52
Cdx2P43241 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Cdx2P43241 AC141476.1-201ENSMUST00000224988 3387 ntBASIC5.56□□□□□ -1.52
Cdx2P43241 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Cdx2P43241 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 94.9 ms