Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm7040-201ENSMUST00000223271 443 ntBASIC5.84□□□□□ -1.47
HttP42859 Ppig-202ENSMUST00000090858 6127 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HttP42859 B130006D01Rik-201ENSMUST00000100534 3124 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
HttP42859 AC165080.3-201ENSMUST00000217162 3116 ntBASIC5.84□□□□□ -1.47
HttP42859 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HttP42859 Platr25-202ENSMUST00000220733 2859 ntAPPRIS P5 TSL 5 BASIC5.84□□□□□ -1.48
HttP42859 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
HttP42859 Sc5d-201ENSMUST00000052725 4787 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HttP42859 Klhl24-201ENSMUST00000023509 6683 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HttP42859 Gfpt1-204ENSMUST00000113658 6238 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HttP42859 Gm25418-201ENSMUST00000104214 129 ntBASIC5.83□□□□□ -1.48
HttP42859 Olfr1274-ps-201ENSMUST00000120681 1035 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
HttP42859 Olfr1077-ps1-201ENSMUST00000213225 1212 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
HttP42859 AC124687.2-201ENSMUST00000221927 1228 ntTSL 5 BASIC5.83□□□□□ -1.48
HttP42859 AC153729.1-201ENSMUST00000214055 2562 ntBASIC5.83□□□□□ -1.48
HttP42859 Myot-201ENSMUST00000025349 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HttP42859 Gnrhr-203ENSMUST00000113372 2265 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HttP42859 AC107232.1-201ENSMUST00000227785 1503 ntBASIC5.83□□□□□ -1.48
HttP42859 Rbpj-208ENSMUST00000201912 5485 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HttP42859 Gm37510-201ENSMUST00000194151 4762 ntBASIC5.83□□□□□ -1.48
HttP42859 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HttP42859 Celsr2-201ENSMUST00000090558 10598 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HttP42859 Itih4-203ENSMUST00000120269 3531 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
HttP42859 Vmn1r204-202ENSMUST00000228195 2936 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
HttP42859 Aox1-201ENSMUST00000001027 4423 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HttP42859 Gpr119-201ENSMUST00000053970 2269 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HttP42859 Gm44062-201ENSMUST00000203312 4857 ntBASIC5.83□□□□□ -1.48
HttP42859 Sh2d1b1-201ENSMUST00000179976 2544 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HttP42859 Gm13745-201ENSMUST00000121994 527 ntBASIC5.83□□□□□ -1.48
HttP42859 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HttP42859 Gm28097-201ENSMUST00000187333 366 ntBASIC5.83□□□□□ -1.48
HttP42859 Gm37878-201ENSMUST00000192108 387 ntBASIC5.83□□□□□ -1.48
HttP42859 Gm18427-201ENSMUST00000195422 515 ntBASIC5.83□□□□□ -1.48
HttP42859 Gm45083-201ENSMUST00000205216 712 ntTSL 3 BASIC5.83□□□□□ -1.48
HttP42859 Amd-ps6-201ENSMUST00000214455 1003 ntBASIC5.83□□□□□ -1.48
HttP42859 Sprr3-201ENSMUST00000058142 1222 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
HttP42859 Meig1-201ENSMUST00000064685 706 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HttP42859 Tmem45a2-203ENSMUST00000227043 1447 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
HttP42859 Ube2u-201ENSMUST00000092730 1435 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HttP42859 Cyp4a28-ps-201ENSMUST00000121884 1477 ntBASIC5.83□□□□□ -1.48
HttP42859 Zfp975-201ENSMUST00000107992 3148 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HttP42859 Rab3b-202ENSMUST00000106650 3327 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HttP42859 Cyp2c70-201ENSMUST00000051846 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HttP42859 Adam22-202ENSMUST00000050166 8969 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
HttP42859 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HttP42859 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
HttP42859 Gm13103-202ENSMUST00000105768 994 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
HttP42859 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HttP42859 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HttP42859 Eif2s2-205ENSMUST00000166171 2312 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HttP42859 Gm37854-201ENSMUST00000192149 1463 ntTSL 5 BASIC5.83□□□□□ -1.48
HttP42859 AC132433.1-201ENSMUST00000221553 1101 ntBASIC5.83□□□□□ -1.48
HttP42859 Smim15-203ENSMUST00000224361 830 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
HttP42859 Myom2-201ENSMUST00000033842 5075 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HttP42859 Atp13a5-201ENSMUST00000075806 4598 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
HttP42859 Fcrl6-201ENSMUST00000094303 1912 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
HttP42859 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
HttP42859 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HttP42859 Gm340-201ENSMUST00000172371 3729 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
HttP42859 Gm37127-201ENSMUST00000192924 3036 ntBASIC5.82□□□□□ -1.48
HttP42859 Ank3-202ENSMUST00000054167 5769 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
HttP42859 Sytl2-206ENSMUST00000190731 3838 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
HttP42859 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
HttP42859 Tenm2-202ENSMUST00000102801 9908 ntAPPRIS P2 TSL 5 BASIC5.82□□□□□ -1.48
HttP42859 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HttP42859 BB019430-202ENSMUST00000218015 1320 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HttP42859 Gm12285-201ENSMUST00000117347 233 ntBASIC5.82□□□□□ -1.48
HttP42859 Gm11510-201ENSMUST00000120278 347 ntBASIC5.82□□□□□ -1.48
HttP42859 Gm5699-201ENSMUST00000152491 723 ntBASIC5.82□□□□□ -1.48
HttP42859 AC136146.1-201ENSMUST00000196180 91 ntBASIC5.82□□□□□ -1.48
HttP42859 2900078I11Rik-201ENSMUST00000214556 999 ntBASIC5.82□□□□□ -1.48
HttP42859 AC154724.1-201ENSMUST00000225782 821 ntBASIC5.82□□□□□ -1.48
HttP42859 Gm5045-201ENSMUST00000027054 810 ntBASIC5.82□□□□□ -1.48
HttP42859 Gm23508-201ENSMUST00000083079 72 ntBASIC5.82□□□□□ -1.48
HttP42859 Gm25139-201ENSMUST00000083247 210 ntBASIC5.82□□□□□ -1.48
HttP42859 Themis-203ENSMUST00000105516 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
HttP42859 Zfhx3-201ENSMUST00000043896 16433 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HttP42859 Nlrp1b-204ENSMUST00000108516 4134 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
HttP42859 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
HttP42859 Fubp1-202ENSMUST00000166984 6523 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
HttP42859 Pomp-202ENSMUST00000201120 3850 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HttP42859 Enpp2-201ENSMUST00000041591 3095 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
HttP42859 Mbnl3-202ENSMUST00000114875 4649 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HttP42859 Gm26085-201ENSMUST00000157900 116 ntBASIC5.82□□□□□ -1.48
HttP42859 Gm18128-201ENSMUST00000172625 511 ntBASIC5.82□□□□□ -1.48
HttP42859 Gm22395-201ENSMUST00000177427 96 ntBASIC5.82□□□□□ -1.48
HttP42859 Olr1-204ENSMUST00000183258 468 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
HttP42859 Gm36843-201ENSMUST00000209303 627 ntTSL 5 BASIC5.82□□□□□ -1.48
HttP42859 AC132384.5-201ENSMUST00000218562 226 ntBASIC5.82□□□□□ -1.48
HttP42859 9430031K09Rik-201ENSMUST00000222913 925 ntBASIC5.82□□□□□ -1.48
HttP42859 BC049715-201ENSMUST00000052702 1120 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HttP42859 Gm5215-201ENSMUST00000054380 405 ntBASIC5.82□□□□□ -1.48
HttP42859 Slitrk2-202ENSMUST00000166241 7769 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
HttP42859 Dus4l-201ENSMUST00000020977 1773 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HttP42859 Fam135b-201ENSMUST00000022953 4623 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
HttP42859 Gm43426-201ENSMUST00000197287 2597 ntBASIC5.82□□□□□ -1.48
HttP42859 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
HttP42859 Cacna1f-202ENSMUST00000115726 6079 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
HttP42859 Olfr1047-202ENSMUST00000216056 2450 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
HttP42859 Gm44022-201ENSMUST00000203708 5429 ntBASIC5.82□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms