Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 3110099E03Rik-202ENSMUST00000134580 2644 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Traf1P39428 Vmn2r97-201ENSMUST00000168710 2586 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Traf1P39428 Gm26984-201ENSMUST00000182345 3510 ntBASIC6.88□□□□□ -1.31
Traf1P39428 4933406F09Rik-204ENSMUST00000181409 2078 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Traf1P39428 Gm20362-201ENSMUST00000204808 2072 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Traf1P39428 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Traf1P39428 Nsun6-208ENSMUST00000195749 3149 ntAPPRIS P3 TSL 5 BASIC6.87□□□□□ -1.31
Traf1P39428 Fmo9-201ENSMUST00000027843 3065 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Traf1P39428 Platr25-202ENSMUST00000220733 2859 ntAPPRIS P5 TSL 5 BASIC6.87□□□□□ -1.31
Traf1P39428 Ddx4-201ENSMUST00000075748 2762 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
Traf1P39428 Filip1l-201ENSMUST00000099667 1576 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Traf1P39428 Gm37894-201ENSMUST00000195416 2599 ntBASIC6.87□□□□□ -1.31
Traf1P39428 Gm44193-201ENSMUST00000204822 2523 ntBASIC6.87□□□□□ -1.31
Traf1P39428 Gm28432-201ENSMUST00000185237 1499 ntTSL 5 BASIC6.87□□□□□ -1.31
Traf1P39428 Gm28081-201ENSMUST00000185321 1497 ntTSL 5 BASIC6.87□□□□□ -1.31
Traf1P39428 Gm29473-201ENSMUST00000185588 1497 ntTSL 5 BASIC6.87□□□□□ -1.31
Traf1P39428 Gm29662-201ENSMUST00000185620 1499 ntTSL 5 BASIC6.87□□□□□ -1.31
Traf1P39428 Gm28082-201ENSMUST00000185683 1499 ntTSL 5 BASIC6.87□□□□□ -1.31
Traf1P39428 Gm29061-201ENSMUST00000185900 1499 ntTSL 5 BASIC6.87□□□□□ -1.31
Traf1P39428 Gm28679-201ENSMUST00000186013 1499 ntTSL 5 BASIC6.87□□□□□ -1.31
Traf1P39428 Gm29565-202ENSMUST00000186260 1499 ntTSL 5 BASIC6.87□□□□□ -1.31
Traf1P39428 Gm28338-202ENSMUST00000186269 1499 ntTSL 5 BASIC6.87□□□□□ -1.31
Traf1P39428 Gm28668-202ENSMUST00000186549 1499 ntTSL 5 BASIC6.87□□□□□ -1.31
Traf1P39428 Gm29321-201ENSMUST00000186727 1499 ntTSL 5 BASIC6.87□□□□□ -1.31
Traf1P39428 Gm28135-201ENSMUST00000186847 1499 ntTSL 5 BASIC6.87□□□□□ -1.31
Traf1P39428 Gm29158-201ENSMUST00000186883 1494 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Traf1P39428 Gm28291-202ENSMUST00000186921 1499 ntTSL 5 BASIC6.87□□□□□ -1.31
Traf1P39428 Gm29393-201ENSMUST00000187002 1499 ntTSL 5 BASIC6.87□□□□□ -1.31
Traf1P39428 Gm29219-201ENSMUST00000187224 1499 ntTSL 5 BASIC6.87□□□□□ -1.31
Traf1P39428 Gm29547-201ENSMUST00000187258 1499 ntTSL 5 BASIC6.87□□□□□ -1.31
Traf1P39428 Gm28260-201ENSMUST00000187337 1499 ntTSL 5 BASIC6.87□□□□□ -1.31
Traf1P39428 Gm28225-201ENSMUST00000187730 1499 ntTSL 5 BASIC6.87□□□□□ -1.31
Traf1P39428 Gm29569-202ENSMUST00000187955 1499 ntTSL 5 BASIC6.87□□□□□ -1.31
Traf1P39428 Gm29625-201ENSMUST00000188079 1499 ntTSL 5 BASIC6.87□□□□□ -1.31
Traf1P39428 Gm28735-202ENSMUST00000188159 1499 ntTSL 5 BASIC6.87□□□□□ -1.31
Traf1P39428 Gm29297-202ENSMUST00000188186 1499 ntTSL 5 BASIC6.87□□□□□ -1.31
Traf1P39428 Gm29457-201ENSMUST00000188224 1499 ntTSL 5 BASIC6.87□□□□□ -1.31
Traf1P39428 Gm29190-201ENSMUST00000188255 1499 ntTSL 5 BASIC6.87□□□□□ -1.31
Traf1P39428 Gm28236-203ENSMUST00000188311 1499 ntTSL 5 BASIC6.87□□□□□ -1.31
Traf1P39428 Gm28197-203ENSMUST00000188434 1499 ntTSL 5 BASIC6.87□□□□□ -1.31
Traf1P39428 Gm29070-202ENSMUST00000188541 1499 ntTSL 5 BASIC6.87□□□□□ -1.31
Traf1P39428 Gm28545-201ENSMUST00000188667 1499 ntTSL 5 BASIC6.87□□□□□ -1.31
Traf1P39428 Gm29265-201ENSMUST00000188697 1499 ntTSL 5 BASIC6.87□□□□□ -1.31
Traf1P39428 Gm28947-203ENSMUST00000188701 1499 ntTSL 5 BASIC6.87□□□□□ -1.31
Traf1P39428 Gm29616-201ENSMUST00000188777 1499 ntTSL 5 BASIC6.87□□□□□ -1.31
Traf1P39428 Gm29162-202ENSMUST00000188893 1499 ntTSL 5 BASIC6.87□□□□□ -1.31
Traf1P39428 Gm28606-201ENSMUST00000188938 1499 ntTSL 5 BASIC6.87□□□□□ -1.31
Traf1P39428 Gm29338-201ENSMUST00000189318 1499 ntTSL 5 BASIC6.87□□□□□ -1.31
Traf1P39428 Gm29425-202ENSMUST00000189421 1499 ntTSL 5 BASIC6.87□□□□□ -1.31
Traf1P39428 Gm29271-203ENSMUST00000189943 1499 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Traf1P39428 Gm29381-201ENSMUST00000190168 1497 ntTSL 5 BASIC6.87□□□□□ -1.31
Traf1P39428 Gm28454-203ENSMUST00000190183 1495 ntTSL 5 BASIC6.87□□□□□ -1.31
Traf1P39428 Gm28842-202ENSMUST00000190289 1499 ntTSL 5 BASIC6.87□□□□□ -1.31
Traf1P39428 Gm28259-201ENSMUST00000190319 1497 ntTSL 5 BASIC6.87□□□□□ -1.31
Traf1P39428 Gm28318-203ENSMUST00000190347 1499 ntTSL 5 BASIC6.87□□□□□ -1.31
Traf1P39428 Gm28633-202ENSMUST00000190867 1485 ntTSL 5 BASIC6.87□□□□□ -1.31
Traf1P39428 Gm29182-202ENSMUST00000191008 1499 ntTSL 5 BASIC6.87□□□□□ -1.31
Traf1P39428 Gm28632-202ENSMUST00000191193 1499 ntTSL 5 BASIC6.87□□□□□ -1.31
Traf1P39428 Gm28245-203ENSMUST00000191551 1495 ntTSL 5 BASIC6.87□□□□□ -1.31
Traf1P39428 Gm38370-201ENSMUST00000192545 1499 ntTSL 5 BASIC6.87□□□□□ -1.31
Traf1P39428 Gm37462-201ENSMUST00000193386 1498 ntTSL 5 BASIC6.87□□□□□ -1.31
Traf1P39428 Gm32114-203ENSMUST00000195759 1499 ntTSL 5 BASIC6.87□□□□□ -1.31
Traf1P39428 AC169985.1-201ENSMUST00000223648 2439 ntBASIC6.87□□□□□ -1.31
Traf1P39428 Gm43627-201ENSMUST00000197119 2299 ntBASIC6.87□□□□□ -1.31
Traf1P39428 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Traf1P39428 Igkv5-37-201ENSMUST00000103372 359 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Traf1P39428 Tfpi-207ENSMUST00000111722 1232 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
Traf1P39428 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Traf1P39428 Gm4342-201ENSMUST00000118982 367 ntBASIC6.87□□□□□ -1.31
Traf1P39428 Gm6620-201ENSMUST00000120113 715 ntBASIC6.87□□□□□ -1.31
Traf1P39428 Rhox3b-ps-201ENSMUST00000121045 868 ntBASIC6.87□□□□□ -1.31
Traf1P39428 Gm13531-201ENSMUST00000121893 543 ntBASIC6.87□□□□□ -1.31
Traf1P39428 Mipepos-201ENSMUST00000155855 610 ntTSL 3 BASIC6.87□□□□□ -1.31
Traf1P39428 Gm26106-201ENSMUST00000157254 228 ntBASIC6.87□□□□□ -1.31
Traf1P39428 Gm20528-202ENSMUST00000174821 802 ntTSL 3 BASIC6.87□□□□□ -1.31
Traf1P39428 Obox3-ps6-201ENSMUST00000176273 1005 ntBASIC6.87□□□□□ -1.31
Traf1P39428 Gm28493-201ENSMUST00000188427 604 ntTSL 5 BASIC6.87□□□□□ -1.31
Traf1P39428 Gm37774-201ENSMUST00000194401 245 ntBASIC6.87□□□□□ -1.31
Traf1P39428 Gm44494-201ENSMUST00000196760 129 ntBASIC6.87□□□□□ -1.31
Traf1P39428 Gm44199-201ENSMUST00000205219 739 ntTSL 3 BASIC6.87□□□□□ -1.31
Traf1P39428 Gm44955-201ENSMUST00000208843 229 ntTSL 5 BASIC6.87□□□□□ -1.31
Traf1P39428 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC6.87□□□□□ -1.31
Traf1P39428 C230072F16Rik-203ENSMUST00000220322 1136 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Traf1P39428 AC166574.7-201ENSMUST00000228502 704 ntBASIC6.87□□□□□ -1.31
Traf1P39428 n-R5s69-201ENSMUST00000083872 119 ntBASIC6.87□□□□□ -1.31
Traf1P39428 Vmn1r168-201ENSMUST00000098704 930 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Traf1P39428 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC6.87□□□□□ -1.31
Traf1P39428 Olfr1155-202ENSMUST00000214641 2048 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Traf1P39428 Olfr1214-203ENSMUST00000217469 1955 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Traf1P39428 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Traf1P39428 Ipo11-205ENSMUST00000186033 4147 ntTSL 5 BASIC6.87□□□□□ -1.31
Traf1P39428 AC158982.1-205ENSMUST00000227339 1876 ntBASIC6.87□□□□□ -1.31
Traf1P39428 Fkbp15-202ENSMUST00000084528 3329 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Traf1P39428 Ugt2a1-201ENSMUST00000147854 2570 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Traf1P39428 Gm38126-201ENSMUST00000195297 4003 ntBASIC6.87□□□□□ -1.31
Traf1P39428 AC124579.1-201ENSMUST00000223468 2520 ntBASIC6.87□□□□□ -1.31
Traf1P39428 Rfc1-203ENSMUST00000203581 4689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Traf1P39428 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
Traf1P39428 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Traf1P39428 Muc15-203ENSMUST00000111017 3095 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms