Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 AC156016.5-201ENSMUST00000228742 355 ntBASIC5.51□□□□□ -1.53
Sftpa1P35242 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Sftpa1P35242 Fpr3-201ENSMUST00000054871 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Sftpa1P35242 Gm24405-201ENSMUST00000083033 167 ntBASIC5.51□□□□□ -1.53
Sftpa1P35242 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Sftpa1P35242 Zfp619-201ENSMUST00000108015 5969 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Sftpa1P35242 Gm8750-201ENSMUST00000173278 1537 ntBASIC5.51□□□□□ -1.53
Sftpa1P35242 Gm2016-201ENSMUST00000110147 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Sftpa1P35242 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Sftpa1P35242 Ubtfl1-201ENSMUST00000098973 1649 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Sftpa1P35242 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Sftpa1P35242 Fbxw13-201ENSMUST00000061456 1485 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Sftpa1P35242 Vmn2r97-201ENSMUST00000168710 2586 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Sftpa1P35242 Ptprd-213ENSMUST00000173376 4793 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Sftpa1P35242 2610001J05Rik-201ENSMUST00000139231 3177 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Sftpa1P35242 Gm38276-201ENSMUST00000192446 1343 ntBASIC5.5□□□□□ -1.53
Sftpa1P35242 Lrriq3-203ENSMUST00000194376 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Sftpa1P35242 Sdr16c6-202ENSMUST00000108383 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Sftpa1P35242 Vmn1r11-202ENSMUST00000226968 2522 ntAPPRIS P2 BASIC5.5□□□□□ -1.53
Sftpa1P35242 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
Sftpa1P35242 Arhgef9-203ENSMUST00000113878 5012 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
Sftpa1P35242 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Sftpa1P35242 Gm18852-201ENSMUST00000184149 3593 ntBASIC5.5□□□□□ -1.53
Sftpa1P35242 Gm42661-201ENSMUST00000202364 1442 ntBASIC5.5□□□□□ -1.53
Sftpa1P35242 Gm42561-201ENSMUST00000202563 1442 ntBASIC5.5□□□□□ -1.53
Sftpa1P35242 Catsperg2-209ENSMUST00000209126 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Sftpa1P35242 Gm16325-201ENSMUST00000141199 3174 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Sftpa1P35242 C3ar1-201ENSMUST00000042081 4305 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Sftpa1P35242 Gm14819-201ENSMUST00000101645 928 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Sftpa1P35242 Gm11972-201ENSMUST00000118514 389 ntBASIC5.5□□□□□ -1.53
Sftpa1P35242 Gm11987-201ENSMUST00000118524 381 ntBASIC5.5□□□□□ -1.53
Sftpa1P35242 Gm7670-201ENSMUST00000121272 641 ntBASIC5.5□□□□□ -1.53
Sftpa1P35242 Gm12005-201ENSMUST00000121451 379 ntBASIC5.5□□□□□ -1.53
Sftpa1P35242 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC5.5□□□□□ -1.53
Sftpa1P35242 Gm12514-202ENSMUST00000150455 699 ntTSL 5 BASIC5.5□□□□□ -1.53
Sftpa1P35242 Gm22312-201ENSMUST00000158005 130 ntBASIC5.5□□□□□ -1.53
Sftpa1P35242 Gm15810-201ENSMUST00000160241 681 ntTSL 3 BASIC5.5□□□□□ -1.53
Sftpa1P35242 Gm3053-201ENSMUST00000161709 616 ntBASIC5.5□□□□□ -1.53
Sftpa1P35242 Vmn1r-ps55-201ENSMUST00000174634 392 ntBASIC5.5□□□□□ -1.53
Sftpa1P35242 Gm22993-201ENSMUST00000175423 254 ntBASIC5.5□□□□□ -1.53
Sftpa1P35242 Gm3307-201ENSMUST00000176164 632 ntBASIC5.5□□□□□ -1.53
Sftpa1P35242 Gm18800-202ENSMUST00000188688 1105 ntBASIC5.5□□□□□ -1.53
Sftpa1P35242 Gm37839-201ENSMUST00000192576 492 ntTSL 5 BASIC5.5□□□□□ -1.53
Sftpa1P35242 Gm43744-201ENSMUST00000196387 688 ntBASIC5.5□□□□□ -1.53
Sftpa1P35242 Gm43712-201ENSMUST00000198020 291 ntBASIC5.5□□□□□ -1.53
Sftpa1P35242 Gm42948-201ENSMUST00000199085 578 ntTSL 5 BASIC5.5□□□□□ -1.53
Sftpa1P35242 Gm43894-201ENSMUST00000203274 688 ntBASIC5.5□□□□□ -1.53
Sftpa1P35242 Gm19596-201ENSMUST00000203685 739 ntBASIC5.5□□□□□ -1.53
Sftpa1P35242 Gm2011-203ENSMUST00000203750 435 ntBASIC5.5□□□□□ -1.53
Sftpa1P35242 Gm4763-202ENSMUST00000205376 807 ntTSL 3 BASIC5.5□□□□□ -1.53
Sftpa1P35242 Gm30928-201ENSMUST00000205858 459 ntTSL 3 BASIC5.5□□□□□ -1.53
Sftpa1P35242 Gm45072-201ENSMUST00000208673 929 ntBASIC5.5□□□□□ -1.53
Sftpa1P35242 Gm5374-202ENSMUST00000222910 314 ntBASIC5.5□□□□□ -1.53
Sftpa1P35242 Hspe1-ps1-201ENSMUST00000222955 330 ntBASIC5.5□□□□□ -1.53
Sftpa1P35242 AC164597.1-201ENSMUST00000226538 514 ntBASIC5.5□□□□□ -1.53
Sftpa1P35242 AC151902.1-201ENSMUST00000227800 375 ntBASIC5.5□□□□□ -1.53
Sftpa1P35242 Akr1c19-201ENSMUST00000081326 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Sftpa1P35242 Mir365-2-201ENSMUST00000083555 112 ntBASIC5.5□□□□□ -1.53
Sftpa1P35242 Heph-203ENSMUST00000113838 4611 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Sftpa1P35242 Nlrp9a-203ENSMUST00000117252 2796 ntTSL 2 BASIC5.5□□□□□ -1.53
Sftpa1P35242 Olfr441-202ENSMUST00000213649 2402 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
Sftpa1P35242 Sh2d1b2-202ENSMUST00000162752 2542 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Sftpa1P35242 Gm10220-201ENSMUST00000088236 2980 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Sftpa1P35242 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC5.5□□□□□ -1.53
Sftpa1P35242 Gm29071-201ENSMUST00000185729 1488 ntTSL 5 BASIC5.5□□□□□ -1.53
Sftpa1P35242 Gm28771-202ENSMUST00000189399 1499 ntTSL 5 BASIC5.5□□□□□ -1.53
Sftpa1P35242 Gm28463-203ENSMUST00000191085 1498 ntTSL 5 BASIC5.5□□□□□ -1.53
Sftpa1P35242 Gm37454-202ENSMUST00000193918 1498 ntTSL 5 BASIC5.5□□□□□ -1.53
Sftpa1P35242 Il2ra-201ENSMUST00000028111 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Sftpa1P35242 Gm6614-203ENSMUST00000181791 2450 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
Sftpa1P35242 AC159006.2-201ENSMUST00000228734 4144 ntBASIC5.5□□□□□ -1.53
Sftpa1P35242 Olfr1215-202ENSMUST00000214809 2683 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Sftpa1P35242 Vmn1r36-201ENSMUST00000226142 1770 ntAPPRIS ALT2 BASIC5.5□□□□□ -1.53
Sftpa1P35242 Gm38368-201ENSMUST00000193181 1335 ntBASIC5.49□□□□□ -1.53
Sftpa1P35242 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Sftpa1P35242 Zfp934-203ENSMUST00000220648 2439 ntTSL 5 BASIC5.49□□□□□ -1.53
Sftpa1P35242 Olfr1392-203ENSMUST00000214170 3507 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Sftpa1P35242 Olfr1392-205ENSMUST00000214598 3506 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Sftpa1P35242 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC5.49□□□□□ -1.53
Sftpa1P35242 Casp4-201ENSMUST00000027012 1435 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Sftpa1P35242 Robo2-210ENSMUST00000226478 8059 ntBASIC5.49□□□□□ -1.53
Sftpa1P35242 Il15ra-213ENSMUST00000135341 1545 ntTSL 3 BASIC5.49□□□□□ -1.53
Sftpa1P35242 AC122357.3-201ENSMUST00000221260 2293 ntBASIC5.49□□□□□ -1.53
Sftpa1P35242 Arhgap15-203ENSMUST00000112824 3118 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Sftpa1P35242 Acad11-202ENSMUST00000120854 3108 ntTSL 5 BASIC5.49□□□□□ -1.53
Sftpa1P35242 Pum1-202ENSMUST00000097862 3991 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Sftpa1P35242 Igkv8-18-201ENSMUST00000103390 395 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Sftpa1P35242 Gm14391-202ENSMUST00000109055 965 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Sftpa1P35242 Oosp3-202ENSMUST00000119053 621 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Sftpa1P35242 Gm15044-201ENSMUST00000120703 598 ntBASIC5.49□□□□□ -1.53
Sftpa1P35242 1700003G18Rik-202ENSMUST00000150518 312 ntTSL 3 BASIC5.49□□□□□ -1.53
Sftpa1P35242 Gm14419-203ENSMUST00000156844 752 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Sftpa1P35242 Gm7281-201ENSMUST00000160010 543 ntBASIC5.49□□□□□ -1.53
Sftpa1P35242 Gm15838-201ENSMUST00000161575 180 ntBASIC5.49□□□□□ -1.53
Sftpa1P35242 Cldn34a-201ENSMUST00000164764 636 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Sftpa1P35242 Gm498-203ENSMUST00000179036 990 ntTSL 5 BASIC5.49□□□□□ -1.53
Sftpa1P35242 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC5.49□□□□□ -1.53
Sftpa1P35242 Gm29596-201ENSMUST00000185710 385 ntBASIC5.49□□□□□ -1.53
Sftpa1P35242 Gm29284-201ENSMUST00000188363 255 ntBASIC5.49□□□□□ -1.53
Sftpa1P35242 Gm38303-201ENSMUST00000192603 536 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms