Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
Hmgb3O54879 Olfr893-202ENSMUST00000211975 2924 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
Hmgb3O54879 Gm3510-201ENSMUST00000180447 1455 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Hmgb3O54879 4921511C10Rik-201ENSMUST00000200412 1463 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Hmgb3O54879 Gm43359-201ENSMUST00000197944 2200 ntBASIC4.61□□□□□ -1.67
Hmgb3O54879 Gm30211-201ENSMUST00000197227 3078 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Hmgb3O54879 Tmem45a2-201ENSMUST00000067173 3073 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
Hmgb3O54879 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Hmgb3O54879 Gm4011-201ENSMUST00000174657 2555 ntBASIC4.6□□□□□ -1.67
Hmgb3O54879 Olfr1339-202ENSMUST00000217522 2559 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
Hmgb3O54879 Mmp13-201ENSMUST00000015394 2673 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Hmgb3O54879 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC4.6□□□□□ -1.67
Hmgb3O54879 Mecom-204ENSMUST00000166001 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
Hmgb3O54879 Gm39327-201ENSMUST00000213594 1982 ntTSL 5 BASIC4.6□□□□□ -1.67
Hmgb3O54879 Nipa2-203ENSMUST00000119041 2979 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Hmgb3O54879 Vmn1r86-204ENSMUST00000227700 5487 ntAPPRIS ALT2 BASIC4.6□□□□□ -1.67
Hmgb3O54879 Ptprd-203ENSMUST00000098005 4542 ntTSL 5 BASIC4.6□□□□□ -1.67
Hmgb3O54879 Gm3978-201ENSMUST00000163406 2512 ntBASIC4.6□□□□□ -1.67
Hmgb3O54879 Gm24869-201ENSMUST00000104072 128 ntBASIC4.6□□□□□ -1.67
Hmgb3O54879 Gm25916-201ENSMUST00000104263 131 ntBASIC4.6□□□□□ -1.67
Hmgb3O54879 Gm25346-201ENSMUST00000104509 128 ntBASIC4.6□□□□□ -1.67
Hmgb3O54879 Krtap9-5-201ENSMUST00000105052 1077 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Hmgb3O54879 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Hmgb3O54879 Gm16394-201ENSMUST00000117289 675 ntBASIC4.6□□□□□ -1.67
Hmgb3O54879 Gm13835-201ENSMUST00000118459 685 ntBASIC4.6□□□□□ -1.67
Hmgb3O54879 Gm16074-201ENSMUST00000119524 444 ntBASIC4.6□□□□□ -1.67
Hmgb3O54879 Gm12396-201ENSMUST00000121600 306 ntBASIC4.6□□□□□ -1.67
Hmgb3O54879 Gm13531-201ENSMUST00000121893 543 ntBASIC4.6□□□□□ -1.67
Hmgb3O54879 Gm13363-201ENSMUST00000122008 522 ntBASIC4.6□□□□□ -1.67
Hmgb3O54879 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC4.6□□□□□ -1.67
Hmgb3O54879 Gm11731-201ENSMUST00000139704 670 ntTSL 3 BASIC4.6□□□□□ -1.67
Hmgb3O54879 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC4.6□□□□□ -1.67
Hmgb3O54879 Gm26321-201ENSMUST00000157740 242 ntBASIC4.6□□□□□ -1.67
Hmgb3O54879 Gm25374-201ENSMUST00000158158 101 ntBASIC4.6□□□□□ -1.67
Hmgb3O54879 Gm24767-201ENSMUST00000158509 95 ntBASIC4.6□□□□□ -1.67
Hmgb3O54879 Nrbf2-202ENSMUST00000159002 583 ntTSL 3 BASIC4.6□□□□□ -1.67
Hmgb3O54879 Vmn1r101-201ENSMUST00000164245 924 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Hmgb3O54879 Vmn1r119-201ENSMUST00000164683 924 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Hmgb3O54879 Vmn1r149-201ENSMUST00000165916 924 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Hmgb3O54879 Gm4187-201ENSMUST00000172551 924 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Hmgb3O54879 Gm4133-201ENSMUST00000172989 924 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Hmgb3O54879 Gm5624-202ENSMUST00000178184 492 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
Hmgb3O54879 Scgb1b34-ps-201ENSMUST00000187959 331 ntBASIC4.6□□□□□ -1.67
Hmgb3O54879 Gm3143-201ENSMUST00000196308 580 ntTSL 3 BASIC4.6□□□□□ -1.67
Hmgb3O54879 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC4.6□□□□□ -1.67
Hmgb3O54879 Sult1c2-ps1-201ENSMUST00000200231 164 ntBASIC4.6□□□□□ -1.67
Hmgb3O54879 Gm43269-201ENSMUST00000202075 518 ntTSL 3 BASIC4.6□□□□□ -1.67
Hmgb3O54879 Gm44226-201ENSMUST00000205203 1195 ntTSL 5 BASIC4.6□□□□□ -1.67
Hmgb3O54879 Olfr374-201ENSMUST00000209675 1053 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Hmgb3O54879 Gm45750-201ENSMUST00000211966 354 ntBASIC4.6□□□□□ -1.67
Hmgb3O54879 4930567H12Rik-201ENSMUST00000212260 955 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Hmgb3O54879 RMST_1.1-205ENSMUST00000218060 997 ntTSL 5 BASIC4.6□□□□□ -1.67
Hmgb3O54879 Gm8137-201ENSMUST00000218997 463 ntBASIC4.6□□□□□ -1.67
Hmgb3O54879 Ninj2-201ENSMUST00000035244 823 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
Hmgb3O54879 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC4.6□□□□□ -1.67
Hmgb3O54879 Fxyd3-201ENSMUST00000072331 439 ntTSL 2 BASIC4.6□□□□□ -1.67
Hmgb3O54879 Olfr1354-201ENSMUST00000075859 1095 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Hmgb3O54879 Raet1d-201ENSMUST00000095795 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Hmgb3O54879 Papola-215ENSMUST00000170002 2605 ntTSL 5 BASIC4.6□□□□□ -1.67
Hmgb3O54879 Obox7-201ENSMUST00000069740 1306 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Hmgb3O54879 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Hmgb3O54879 Gm13544-201ENSMUST00000131189 2940 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Hmgb3O54879 Gm29398-201ENSMUST00000186355 1491 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Hmgb3O54879 Olfr518-202ENSMUST00000217803 2994 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Hmgb3O54879 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC4.6□□□□□ -1.67
Hmgb3O54879 Gm35585-201ENSMUST00000195996 1570 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Hmgb3O54879 Pold3-209ENSMUST00000208670 1716 ntTSL 5 BASIC4.6□□□□□ -1.67
Hmgb3O54879 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Hmgb3O54879 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
Hmgb3O54879 Olfr1087-202ENSMUST00000214141 3861 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Hmgb3O54879 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Hmgb3O54879 Vmn2r98-201ENSMUST00000170424 2574 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Hmgb3O54879 Gm9577-201ENSMUST00000174655 2620 ntBASIC4.59□□□□□ -1.67
Hmgb3O54879 Dcun1d1-212ENSMUST00000198389 3020 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Hmgb3O54879 Vmn2r88-202ENSMUST00000159674 3098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
Hmgb3O54879 4933434E20Rik-201ENSMUST00000029551 3097 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Hmgb3O54879 Zbed4-ps1-201ENSMUST00000186734 3466 ntBASIC4.59□□□□□ -1.67
Hmgb3O54879 Gm43027-201ENSMUST00000202906 3691 ntBASIC4.59□□□□□ -1.67
Hmgb3O54879 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Hmgb3O54879 Gm22267-201ENSMUST00000104008 131 ntBASIC4.59□□□□□ -1.67
Hmgb3O54879 Gm8250-201ENSMUST00000117398 774 ntBASIC4.59□□□□□ -1.67
Hmgb3O54879 Gm13735-201ENSMUST00000120217 670 ntBASIC4.59□□□□□ -1.67
Hmgb3O54879 Gm13998-201ENSMUST00000120952 335 ntBASIC4.59□□□□□ -1.67
Hmgb3O54879 Mettl4-ps1-201ENSMUST00000127676 1272 ntBASIC4.59□□□□□ -1.67
Hmgb3O54879 4930517O19Rik-201ENSMUST00000140320 603 ntTSL 5 BASIC4.59□□□□□ -1.67
Hmgb3O54879 4930451E10Rik-202ENSMUST00000152292 557 ntTSL 3 BASIC4.59□□□□□ -1.67
Hmgb3O54879 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC4.59□□□□□ -1.67
Hmgb3O54879 Gm25826-201ENSMUST00000157090 137 ntBASIC4.59□□□□□ -1.67
Hmgb3O54879 Gm24477-201ENSMUST00000157438 103 ntBASIC4.59□□□□□ -1.67
Hmgb3O54879 Gm22916-201ENSMUST00000157616 119 ntBASIC4.59□□□□□ -1.67
Hmgb3O54879 Gm26162-201ENSMUST00000157793 132 ntBASIC4.59□□□□□ -1.67
Hmgb3O54879 Gm26170-201ENSMUST00000158419 148 ntBASIC4.59□□□□□ -1.67
Hmgb3O54879 Gm8582-201ENSMUST00000164061 789 ntBASIC4.59□□□□□ -1.67
Hmgb3O54879 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Hmgb3O54879 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC4.59□□□□□ -1.67
Hmgb3O54879 Gm8229-201ENSMUST00000168161 1403 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Hmgb3O54879 Gm9671-201ENSMUST00000171502 547 ntBASIC4.59□□□□□ -1.67
Hmgb3O54879 Gm17202-201ENSMUST00000171723 951 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Hmgb3O54879 Gm17175-201ENSMUST00000172117 1403 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Hmgb3O54879 Gm44494-201ENSMUST00000196760 129 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms