Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC6.62□□□□□ -1.35
Ddx56Q9D0R4 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC6.62□□□□□ -1.35
Ddx56Q9D0R4 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC6.62□□□□□ -1.35
Ddx56Q9D0R4 Zfp169-202ENSMUST00000167682 411 ntTSL 5 BASIC6.62□□□□□ -1.35
Ddx56Q9D0R4 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC6.62□□□□□ -1.35
Ddx56Q9D0R4 Gm22642-201ENSMUST00000175352 252 ntBASIC6.62□□□□□ -1.35
Ddx56Q9D0R4 Gm19815-201ENSMUST00000175818 335 ntBASIC6.62□□□□□ -1.35
Ddx56Q9D0R4 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Ddx56Q9D0R4 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Ddx56Q9D0R4 Gm29594-201ENSMUST00000191181 398 ntTSL 5 BASIC6.62□□□□□ -1.35
Ddx56Q9D0R4 Gm6074-201ENSMUST00000193340 451 ntBASIC6.62□□□□□ -1.35
Ddx56Q9D0R4 Gm7626-201ENSMUST00000195801 353 ntBASIC6.62□□□□□ -1.35
Ddx56Q9D0R4 Tshb-205ENSMUST00000197322 476 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Ddx56Q9D0R4 Gm17824-201ENSMUST00000197690 805 ntBASIC6.62□□□□□ -1.35
Ddx56Q9D0R4 Mir142-201ENSMUST00000198092 64 ntBASIC6.62□□□□□ -1.35
Ddx56Q9D0R4 Gm18611-201ENSMUST00000200334 1118 ntBASIC6.62□□□□□ -1.35
Ddx56Q9D0R4 Olfr519-202ENSMUST00000202706 945 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Ddx56Q9D0R4 Gm17908-201ENSMUST00000205552 1256 ntBASIC6.62□□□□□ -1.35
Ddx56Q9D0R4 Gm32975-201ENSMUST00000211651 584 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Ddx56Q9D0R4 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC6.62□□□□□ -1.35
Ddx56Q9D0R4 AC124601.1-201ENSMUST00000220531 135 ntBASIC6.62□□□□□ -1.35
Ddx56Q9D0R4 Gm19540-201ENSMUST00000221843 810 ntBASIC6.62□□□□□ -1.35
Ddx56Q9D0R4 AC073562.1-201ENSMUST00000222117 401 ntBASIC6.62□□□□□ -1.35
Ddx56Q9D0R4 Gm18618-201ENSMUST00000222211 473 ntBASIC6.62□□□□□ -1.35
Ddx56Q9D0R4 Gm5457-201ENSMUST00000022260 333 ntBASIC6.62□□□□□ -1.35
Ddx56Q9D0R4 AC141884.1-201ENSMUST00000226327 636 ntBASIC6.62□□□□□ -1.35
Ddx56Q9D0R4 Lgals2-201ENSMUST00000044584 590 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Ddx56Q9D0R4 Olfr1440-201ENSMUST00000054567 948 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Ddx56Q9D0R4 Vmn1r4-201ENSMUST00000096612 1034 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Ddx56Q9D0R4 Olfr598-201ENSMUST00000098202 960 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Ddx56Q9D0R4 Olfr1111-201ENSMUST00000099860 940 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Ddx56Q9D0R4 Gm44045-201ENSMUST00000204906 2520 ntBASIC6.62□□□□□ -1.35
Ddx56Q9D0R4 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Ddx56Q9D0R4 AC154630.1-201ENSMUST00000215334 2440 ntBASIC6.62□□□□□ -1.35
Ddx56Q9D0R4 Olfr1115-202ENSMUST00000213513 3604 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Ddx56Q9D0R4 Gm43612-201ENSMUST00000196087 3207 ntBASIC6.62□□□□□ -1.35
Ddx56Q9D0R4 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Ddx56Q9D0R4 Rasef-201ENSMUST00000058292 5183 ntTSL 5 BASIC6.62□□□□□ -1.35
Ddx56Q9D0R4 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC6.62□□□□□ -1.35
Ddx56Q9D0R4 Gm42615-201ENSMUST00000197704 1820 ntBASIC6.62□□□□□ -1.35
Ddx56Q9D0R4 Ube4a-201ENSMUST00000117506 6039 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Ddx56Q9D0R4 Taf7-201ENSMUST00000066272 3302 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Ddx56Q9D0R4 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Ddx56Q9D0R4 Gm37248-201ENSMUST00000193576 3174 ntBASIC6.61□□□□□ -1.35
Ddx56Q9D0R4 Otc-201ENSMUST00000049910 2319 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Ddx56Q9D0R4 Rapgef4-203ENSMUST00000102698 2982 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Ddx56Q9D0R4 4921511C10Rik-201ENSMUST00000200412 1463 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Ddx56Q9D0R4 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC6.61□□□□□ -1.35
Ddx56Q9D0R4 Olfr1381-202ENSMUST00000213256 4954 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Ddx56Q9D0R4 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Ddx56Q9D0R4 Gm44886-201ENSMUST00000209009 1304 ntTSL 5 BASIC6.61□□□□□ -1.35
Ddx56Q9D0R4 Tfb1m-201ENSMUST00000041003 1327 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Ddx56Q9D0R4 Adgrg2-203ENSMUST00000112401 4632 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
Ddx56Q9D0R4 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Ddx56Q9D0R4 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Ddx56Q9D0R4 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Ddx56Q9D0R4 F830016B08Rik-201ENSMUST00000171297 3297 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Ddx56Q9D0R4 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Ddx56Q9D0R4 Gm38077-201ENSMUST00000193657 3245 ntBASIC6.61□□□□□ -1.35
Ddx56Q9D0R4 Igkv18-36-201ENSMUST00000103373 344 ntAPPRIS ALT2 BASIC6.61□□□□□ -1.35
Ddx56Q9D0R4 Gm8692-201ENSMUST00000118102 438 ntBASIC6.61□□□□□ -1.35
Ddx56Q9D0R4 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
Ddx56Q9D0R4 Gm7058-201ENSMUST00000119209 902 ntBASIC6.61□□□□□ -1.35
Ddx56Q9D0R4 Gm15238-201ENSMUST00000119938 1296 ntBASIC6.61□□□□□ -1.35
Ddx56Q9D0R4 Gm14725-201ENSMUST00000120324 828 ntBASIC6.61□□□□□ -1.35
Ddx56Q9D0R4 Gm11925-201ENSMUST00000121375 535 ntBASIC6.61□□□□□ -1.35
Ddx56Q9D0R4 Gm13380-201ENSMUST00000124322 718 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Ddx56Q9D0R4 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC6.61□□□□□ -1.35
Ddx56Q9D0R4 Sptssb-202ENSMUST00000171529 772 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Ddx56Q9D0R4 Gm26715-201ENSMUST00000181676 1095 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Ddx56Q9D0R4 Gm21715-201ENSMUST00000191056 694 ntBASIC6.61□□□□□ -1.35
Ddx56Q9D0R4 4930590L14Rik-201ENSMUST00000196030 836 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Ddx56Q9D0R4 Gm42919-201ENSMUST00000197753 1284 ntBASIC6.61□□□□□ -1.35
Ddx56Q9D0R4 Gm43476-201ENSMUST00000197873 405 ntBASIC6.61□□□□□ -1.35
Ddx56Q9D0R4 Gm42865-201ENSMUST00000197981 613 ntTSL 3 BASIC6.61□□□□□ -1.35
Ddx56Q9D0R4 Gm8891-201ENSMUST00000198546 832 ntBASIC6.61□□□□□ -1.35
Ddx56Q9D0R4 Gm44075-201ENSMUST00000204208 216 ntBASIC6.61□□□□□ -1.35
Ddx56Q9D0R4 Gm31897-202ENSMUST00000206231 604 ntTSL 3 BASIC6.61□□□□□ -1.35
Ddx56Q9D0R4 Dlg2-216ENSMUST00000209170 1057 ntTSL 2 BASIC6.61□□□□□ -1.35
Ddx56Q9D0R4 Tecr-214ENSMUST00000212990 648 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Ddx56Q9D0R4 Gm11360-201ENSMUST00000221898 262 ntBASIC6.61□□□□□ -1.35
Ddx56Q9D0R4 Gm8288-201ENSMUST00000223406 593 ntBASIC6.61□□□□□ -1.35
Ddx56Q9D0R4 Smim15-202ENSMUST00000223808 808 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Ddx56Q9D0R4 AC105407.1-201ENSMUST00000225684 614 ntBASIC6.61□□□□□ -1.35
Ddx56Q9D0R4 AC154640.3-201ENSMUST00000227492 846 ntBASIC6.61□□□□□ -1.35
Ddx56Q9D0R4 AC154563.1-201ENSMUST00000228317 442 ntBASIC6.61□□□□□ -1.35
Ddx56Q9D0R4 Prl2c1-201ENSMUST00000054932 681 ntAPPRIS P2 TSL 5 BASIC6.61□□□□□ -1.35
Ddx56Q9D0R4 Olfr135-201ENSMUST00000076245 1079 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Ddx56Q9D0R4 Gm22575-201ENSMUST00000082981 110 ntBASIC6.61□□□□□ -1.35
Ddx56Q9D0R4 Mir7b-201ENSMUST00000083557 111 ntBASIC6.61□□□□□ -1.35
Ddx56Q9D0R4 Olfr586-201ENSMUST00000084811 954 ntAPPRIS P2 BASIC6.61□□□□□ -1.35
Ddx56Q9D0R4 4930567H17Rik-201ENSMUST00000092405 840 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Ddx56Q9D0R4 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Ddx56Q9D0R4 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Ddx56Q9D0R4 Akt3-202ENSMUST00000111159 4906 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Ddx56Q9D0R4 Gm17435-201ENSMUST00000181452 2994 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Ddx56Q9D0R4 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Ddx56Q9D0R4 Chek1-201ENSMUST00000034625 3397 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Ddx56Q9D0R4 Vmn2r28-201ENSMUST00000086297 3785 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Ddx56Q9D0R4 Maoa-201ENSMUST00000026013 4167 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 136.3 ms