Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm37784-201ENSMUST00000193233 189 ntBASIC6.59□□□□□ -1.35
Smc1aQ9CU62 Gm4742-201ENSMUST00000200261 771 ntBASIC6.59□□□□□ -1.35
Smc1aQ9CU62 AC132232.1-201ENSMUST00000214667 1019 ntTSL 3 BASIC6.59□□□□□ -1.35
Smc1aQ9CU62 AC140409.4-201ENSMUST00000215757 538 ntBASIC6.59□□□□□ -1.35
Smc1aQ9CU62 Mrpl42-203ENSMUST00000218893 661 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Smc1aQ9CU62 Gm3785-201ENSMUST00000221000 202 ntBASIC6.59□□□□□ -1.35
Smc1aQ9CU62 Gm11360-201ENSMUST00000221898 262 ntBASIC6.59□□□□□ -1.35
Smc1aQ9CU62 Gm7557-201ENSMUST00000221935 865 ntBASIC6.59□□□□□ -1.35
Smc1aQ9CU62 Gm36262-201ENSMUST00000223274 499 ntBASIC6.59□□□□□ -1.35
Smc1aQ9CU62 AC122393.2-201ENSMUST00000226404 1093 ntBASIC6.59□□□□□ -1.35
Smc1aQ9CU62 Mcts1-201ENSMUST00000000365 783 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Smc1aQ9CU62 Vmn1r4-201ENSMUST00000096612 1034 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Smc1aQ9CU62 Olfr651-201ENSMUST00000098176 1069 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Smc1aQ9CU62 Fignl1-202ENSMUST00000109664 2807 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Smc1aQ9CU62 Gm9521-201ENSMUST00000206656 1516 ntBASIC6.59□□□□□ -1.35
Smc1aQ9CU62 Mug2-201ENSMUST00000081777 4579 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Smc1aQ9CU62 Amz2-201ENSMUST00000020929 1811 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.35
Smc1aQ9CU62 AC164107.1-202ENSMUST00000228953 1816 ntBASIC6.59□□□□□ -1.35
Smc1aQ9CU62 F930017D23Rik-201ENSMUST00000099888 1836 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Smc1aQ9CU62 Epha4-204ENSMUST00000188797 3612 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Smc1aQ9CU62 Gm38036-201ENSMUST00000194586 3564 ntBASIC6.59□□□□□ -1.35
Smc1aQ9CU62 Gm5373-202ENSMUST00000212931 2964 ntTSL 2 BASIC6.59□□□□□ -1.35
Smc1aQ9CU62 Gm15354-201ENSMUST00000132019 1772 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Smc1aQ9CU62 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Smc1aQ9CU62 Tmc5-201ENSMUST00000057320 2926 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.36
Smc1aQ9CU62 Gm42697-201ENSMUST00000198992 4092 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
Smc1aQ9CU62 4933404K08Rik-201ENSMUST00000156977 1434 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
Smc1aQ9CU62 Gm43627-201ENSMUST00000197119 2299 ntBASIC6.59□□□□□ -1.36
Smc1aQ9CU62 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Smc1aQ9CU62 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Smc1aQ9CU62 Olfr1171-ps1-202ENSMUST00000150178 1398 ntTSL 3 BASIC6.58□□□□□ -1.36
Smc1aQ9CU62 Epha3-201ENSMUST00000064405 5659 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Smc1aQ9CU62 Gm6125-201ENSMUST00000217983 3472 ntBASIC6.58□□□□□ -1.36
Smc1aQ9CU62 AC166358.5-201ENSMUST00000220706 1302 ntBASIC6.58□□□□□ -1.36
Smc1aQ9CU62 Clec2i-203ENSMUST00000159866 2330 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Smc1aQ9CU62 Zkscan8-204ENSMUST00000224362 6954 ntAPPRIS ALT2 BASIC6.58□□□□□ -1.36
Smc1aQ9CU62 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Smc1aQ9CU62 Akap5-202ENSMUST00000154078 6685 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Smc1aQ9CU62 Ighv8-12-201ENSMUST00000103540 315 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Smc1aQ9CU62 Gm25345-201ENSMUST00000104505 133 ntBASIC6.58□□□□□ -1.36
Smc1aQ9CU62 Gm16074-201ENSMUST00000119524 444 ntBASIC6.58□□□□□ -1.36
Smc1aQ9CU62 Pttg1-206ENSMUST00000121638 948 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Smc1aQ9CU62 Vmn2r-ps86-201ENSMUST00000174812 871 ntBASIC6.58□□□□□ -1.36
Smc1aQ9CU62 Gm27037-201ENSMUST00000182270 960 ntBASIC6.58□□□□□ -1.36
Smc1aQ9CU62 Gm18342-201ENSMUST00000186987 694 ntBASIC6.58□□□□□ -1.36
Smc1aQ9CU62 Gm28186-201ENSMUST00000187447 679 ntBASIC6.58□□□□□ -1.36
Smc1aQ9CU62 Gm2427-201ENSMUST00000189121 881 ntBASIC6.58□□□□□ -1.36
Smc1aQ9CU62 Gm8419-201ENSMUST00000189886 412 ntBASIC6.58□□□□□ -1.36
Smc1aQ9CU62 Gm19124-201ENSMUST00000191041 832 ntBASIC6.58□□□□□ -1.36
Smc1aQ9CU62 Gm18698-201ENSMUST00000192327 668 ntBASIC6.58□□□□□ -1.36
Smc1aQ9CU62 Gm38413-201ENSMUST00000197852 348 ntTSL 2 BASIC6.58□□□□□ -1.36
Smc1aQ9CU62 Gm43685-201ENSMUST00000198876 706 ntTSL 3 BASIC6.58□□□□□ -1.36
Smc1aQ9CU62 Gm43132-201ENSMUST00000199106 792 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Smc1aQ9CU62 Gm43215-201ENSMUST00000199108 252 ntBASIC6.58□□□□□ -1.36
Smc1aQ9CU62 Gm43269-201ENSMUST00000202075 518 ntTSL 3 BASIC6.58□□□□□ -1.36
Smc1aQ9CU62 Gm5110-201ENSMUST00000203122 1063 ntBASIC6.58□□□□□ -1.36
Smc1aQ9CU62 4833403J16Rik-201ENSMUST00000204490 1031 ntBASIC6.58□□□□□ -1.36
Smc1aQ9CU62 Gm34350-201ENSMUST00000208898 481 ntTSL 5 BASIC6.58□□□□□ -1.36
Smc1aQ9CU62 Gm45579-201ENSMUST00000209367 887 ntTSL 5 BASIC6.58□□□□□ -1.36
Smc1aQ9CU62 Gm45750-201ENSMUST00000211966 354 ntBASIC6.58□□□□□ -1.36
Smc1aQ9CU62 Amd-ps6-201ENSMUST00000214455 1003 ntBASIC6.58□□□□□ -1.36
Smc1aQ9CU62 Olfr1503-ps1-201ENSMUST00000076614 803 ntBASIC6.58□□□□□ -1.36
Smc1aQ9CU62 Olfr149-201ENSMUST00000082027 1030 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Smc1aQ9CU62 mt-Nd6-201ENSMUST00000082419 519 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Smc1aQ9CU62 Fchsd2-202ENSMUST00000098250 4316 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Smc1aQ9CU62 A530076I17Rik-202ENSMUST00000228352 1524 ntBASIC6.58□□□□□ -1.36
Smc1aQ9CU62 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Smc1aQ9CU62 Mme-205ENSMUST00000194134 8039 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Smc1aQ9CU62 Gm14886-201ENSMUST00000117208 2629 ntBASIC6.58□□□□□ -1.36
Smc1aQ9CU62 Gm37060-201ENSMUST00000194997 2397 ntBASIC6.58□□□□□ -1.36
Smc1aQ9CU62 Tgtp2-201ENSMUST00000046745 2810 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Smc1aQ9CU62 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Smc1aQ9CU62 Als2cr12-203ENSMUST00000188772 1382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Smc1aQ9CU62 AC159308.1-201ENSMUST00000216615 1351 ntBASIC6.57□□□□□ -1.36
Smc1aQ9CU62 AI838599-201ENSMUST00000133960 2953 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Smc1aQ9CU62 Csrnp3-204ENSMUST00000122912 10672 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
Smc1aQ9CU62 D5Ertd577e-201ENSMUST00000094593 2462 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Smc1aQ9CU62 Ncoa7-208ENSMUST00000215926 2875 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Smc1aQ9CU62 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Smc1aQ9CU62 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Smc1aQ9CU62 Impact-201ENSMUST00000025290 3432 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Smc1aQ9CU62 Cpa6-201ENSMUST00000035577 1932 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Smc1aQ9CU62 Mup3-202ENSMUST00000107472 916 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Smc1aQ9CU62 Cd47-202ENSMUST00000114496 867 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Smc1aQ9CU62 Gm8692-201ENSMUST00000118102 438 ntBASIC6.57□□□□□ -1.36
Smc1aQ9CU62 Gm12147-201ENSMUST00000144024 182 ntTSL 3 BASIC6.57□□□□□ -1.36
Smc1aQ9CU62 Gm23050-201ENSMUST00000158775 165 ntBASIC6.57□□□□□ -1.36
Smc1aQ9CU62 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Smc1aQ9CU62 Gm26057-201ENSMUST00000178099 165 ntBASIC6.57□□□□□ -1.36
Smc1aQ9CU62 Gm27024-201ENSMUST00000182561 755 ntBASIC6.57□□□□□ -1.36
Smc1aQ9CU62 Igkv19-93-201ENSMUST00000183936 344 ntAPPRIS ALT2 BASIC6.57□□□□□ -1.36
Smc1aQ9CU62 Mlip-214ENSMUST00000185039 1295 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Smc1aQ9CU62 Gm37756-201ENSMUST00000191834 942 ntTSL 3 BASIC6.57□□□□□ -1.36
Smc1aQ9CU62 4930590L14Rik-201ENSMUST00000196030 836 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Smc1aQ9CU62 Gm42640-201ENSMUST00000199792 1195 ntBASIC6.57□□□□□ -1.36
Smc1aQ9CU62 Gm7832-201ENSMUST00000202613 880 ntBASIC6.57□□□□□ -1.36
Smc1aQ9CU62 Gm38590-201ENSMUST00000209515 970 ntTSL 5 BASIC6.57□□□□□ -1.36
Smc1aQ9CU62 Gm8863-201ENSMUST00000216630 926 ntBASIC6.57□□□□□ -1.36
Smc1aQ9CU62 Olfr628-202ENSMUST00000218266 951 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Smc1aQ9CU62 Gm16497-202ENSMUST00000223480 557 ntTSL 3 BASIC6.57□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms