Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Ube2dnl1-201ENSMUST00000059509 743 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Trim8Q99PJ2 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Trim8Q99PJ2 Fpr2-201ENSMUST00000064068 1133 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Trim8Q99PJ2 Cd48-202ENSMUST00000068584 1186 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Trim8Q99PJ2 Klra2-202ENSMUST00000088867 1132 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Trim8Q99PJ2 Gm5446-201ENSMUST00000091762 784 ntBASIC6.26□□□□□ -1.41
Trim8Q99PJ2 Nckap5-203ENSMUST00000094610 739 ntTSL 3 BASIC6.26□□□□□ -1.41
Trim8Q99PJ2 Ppargc1a-203ENSMUST00000132734 6464 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Trim8Q99PJ2 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Trim8Q99PJ2 Pde7a-201ENSMUST00000091314 4454 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
Trim8Q99PJ2 Themis-203ENSMUST00000105516 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Trim8Q99PJ2 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC6.26□□□□□ -1.41
Trim8Q99PJ2 Slc17a3-204ENSMUST00000166467 4336 ntAPPRIS P3 TSL 5 BASIC6.26□□□□□ -1.41
Trim8Q99PJ2 Gje1-201ENSMUST00000020016 1480 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Trim8Q99PJ2 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
Trim8Q99PJ2 Gm44102-201ENSMUST00000204031 1666 ntBASIC6.26□□□□□ -1.41
Trim8Q99PJ2 Gm10767-201ENSMUST00000099412 1652 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Trim8Q99PJ2 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Trim8Q99PJ2 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Trim8Q99PJ2 Abcd2-201ENSMUST00000069511 5527 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Trim8Q99PJ2 Psg20-202ENSMUST00000108482 1871 ntAPPRIS P5 TSL 5 BASIC6.26□□□□□ -1.41
Trim8Q99PJ2 Olfr1302-203ENSMUST00000215244 2729 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Trim8Q99PJ2 Cr2-208ENSMUST00000195120 6212 ntTSL 5 BASIC6.26□□□□□ -1.41
Trim8Q99PJ2 Gm8853-201ENSMUST00000198366 1344 ntBASIC6.25□□□□□ -1.41
Trim8Q99PJ2 Tfb1m-201ENSMUST00000041003 1327 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Trim8Q99PJ2 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC6.25□□□□□ -1.41
Trim8Q99PJ2 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Trim8Q99PJ2 Vmn1r89-205ENSMUST00000227276 1417 ntAPPRIS ALT2 BASIC6.25□□□□□ -1.41
Trim8Q99PJ2 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Trim8Q99PJ2 Gm37106-201ENSMUST00000193760 1532 ntBASIC6.25□□□□□ -1.41
Trim8Q99PJ2 Pole2-202ENSMUST00000221411 1641 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Trim8Q99PJ2 Olfr281-202ENSMUST00000217517 4535 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Trim8Q99PJ2 Plekhg1-201ENSMUST00000042438 7190 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Trim8Q99PJ2 Olfr537-ps1-202ENSMUST00000210949 2821 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
Trim8Q99PJ2 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Trim8Q99PJ2 Nlrp5-201ENSMUST00000015866 3508 ntAPPRIS P4 TSL 1 (best) BASIC6.25□□□□□ -1.41
Trim8Q99PJ2 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
Trim8Q99PJ2 Gm14885-201ENSMUST00000117969 496 ntBASIC6.25□□□□□ -1.41
Trim8Q99PJ2 Gm15361-201ENSMUST00000119320 444 ntBASIC6.25□□□□□ -1.41
Trim8Q99PJ2 Gm15311-201ENSMUST00000119682 282 ntBASIC6.25□□□□□ -1.41
Trim8Q99PJ2 Gm15238-201ENSMUST00000119938 1296 ntBASIC6.25□□□□□ -1.41
Trim8Q99PJ2 Gm15305-201ENSMUST00000120354 288 ntBASIC6.25□□□□□ -1.41
Trim8Q99PJ2 Gm12026-201ENSMUST00000120961 1024 ntBASIC6.25□□□□□ -1.41
Trim8Q99PJ2 Gm15349-201ENSMUST00000121154 204 ntBASIC6.25□□□□□ -1.41
Trim8Q99PJ2 4930517O19Rik-201ENSMUST00000140320 603 ntTSL 5 BASIC6.25□□□□□ -1.41
Trim8Q99PJ2 Gm3091-201ENSMUST00000163408 484 ntBASIC6.25□□□□□ -1.41
Trim8Q99PJ2 Gm8206-203ENSMUST00000171428 997 ntTSL 5 BASIC6.25□□□□□ -1.41
Trim8Q99PJ2 1110038B12Rik-201ENSMUST00000172501 579 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Trim8Q99PJ2 Gm18833-201ENSMUST00000173218 862 ntBASIC6.25□□□□□ -1.41
Trim8Q99PJ2 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Trim8Q99PJ2 Gm5624-202ENSMUST00000178184 492 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
Trim8Q99PJ2 Rian-203ENSMUST00000181527 989 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Trim8Q99PJ2 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Trim8Q99PJ2 Gm27360-201ENSMUST00000183487 80 ntBASIC6.25□□□□□ -1.41
Trim8Q99PJ2 Mir8105-201ENSMUST00000184718 89 ntBASIC6.25□□□□□ -1.41
Trim8Q99PJ2 1110008L16Rik-206ENSMUST00000184980 888 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
Trim8Q99PJ2 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Trim8Q99PJ2 Gm29099-201ENSMUST00000187370 760 ntTSL 5 BASIC6.25□□□□□ -1.41
Trim8Q99PJ2 1700034K08Rik-202ENSMUST00000188082 619 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Trim8Q99PJ2 Gm28501-201ENSMUST00000188729 421 ntTSL 2 BASIC6.25□□□□□ -1.41
Trim8Q99PJ2 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC6.25□□□□□ -1.41
Trim8Q99PJ2 Gm18984-201ENSMUST00000193998 1124 ntBASIC6.25□□□□□ -1.41
Trim8Q99PJ2 Gm37526-201ENSMUST00000194640 619 ntBASIC6.25□□□□□ -1.41
Trim8Q99PJ2 Gm44395-201ENSMUST00000197056 153 ntBASIC6.25□□□□□ -1.41
Trim8Q99PJ2 Gm40155-201ENSMUST00000198291 818 ntTSL 3 BASIC6.25□□□□□ -1.41
Trim8Q99PJ2 Gm3549-201ENSMUST00000203873 794 ntBASIC6.25□□□□□ -1.41
Trim8Q99PJ2 4930513N20Rik-201ENSMUST00000207466 1265 ntBASIC6.25□□□□□ -1.41
Trim8Q99PJ2 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC6.25□□□□□ -1.41
Trim8Q99PJ2 Gm18598-201ENSMUST00000207724 597 ntBASIC6.25□□□□□ -1.41
Trim8Q99PJ2 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC6.25□□□□□ -1.41
Trim8Q99PJ2 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC6.25□□□□□ -1.41
Trim8Q99PJ2 AC163661.1-201ENSMUST00000216546 910 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Trim8Q99PJ2 AC133207.2-201ENSMUST00000218430 237 ntTSL 5 BASIC6.25□□□□□ -1.41
Trim8Q99PJ2 Gm4057-201ENSMUST00000221407 368 ntBASIC6.25□□□□□ -1.41
Trim8Q99PJ2 4933433N18Rik-201ENSMUST00000222134 1220 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Trim8Q99PJ2 AC165260.1-201ENSMUST00000224127 683 ntBASIC6.25□□□□□ -1.41
Trim8Q99PJ2 AC091237.1-201ENSMUST00000224911 637 ntBASIC6.25□□□□□ -1.41
Trim8Q99PJ2 Diaph3-206ENSMUST00000226745 713 ntBASIC6.25□□□□□ -1.41
Trim8Q99PJ2 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Trim8Q99PJ2 Olfr1451-201ENSMUST00000063144 933 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Trim8Q99PJ2 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Trim8Q99PJ2 Gm5321-201ENSMUST00000072050 447 ntBASIC6.25□□□□□ -1.41
Trim8Q99PJ2 Pja2-202ENSMUST00000024889 4345 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Trim8Q99PJ2 AC154841.1-201ENSMUST00000227263 1479 ntBASIC6.25□□□□□ -1.41
Trim8Q99PJ2 AC159476.1-201ENSMUST00000215914 1668 ntBASIC6.25□□□□□ -1.41
Trim8Q99PJ2 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
Trim8Q99PJ2 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Trim8Q99PJ2 Gm26655-203ENSMUST00000181095 2078 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Trim8Q99PJ2 4933406F09Rik-204ENSMUST00000181409 2078 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Trim8Q99PJ2 Gm26680-203ENSMUST00000181701 2078 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Trim8Q99PJ2 Gm26630-204ENSMUST00000181759 2078 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Trim8Q99PJ2 Gm26650-204ENSMUST00000181881 2078 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Trim8Q99PJ2 AC174797.3-203ENSMUST00000225749 2078 ntBASIC6.25□□□□□ -1.41
Trim8Q99PJ2 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Trim8Q99PJ2 Serpinb5-203ENSMUST00000112730 2672 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Trim8Q99PJ2 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Trim8Q99PJ2 Vmn1r181-204ENSMUST00000227637 4587 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Trim8Q99PJ2 Rorb-201ENSMUST00000040153 8759 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Trim8Q99PJ2 Cyp2j8-201ENSMUST00000124729 1512 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Trim8Q99PJ2 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 122 ms