Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 4931440P22Rik-205ENSMUST00000194448 474 ntBASIC5.71□□□□□ -1.5
Ccdc28bQ8CEG5 Gm43396-201ENSMUST00000197506 706 ntBASIC5.71□□□□□ -1.5
Ccdc28bQ8CEG5 Gm44316-201ENSMUST00000199274 97 ntBASIC5.71□□□□□ -1.5
Ccdc28bQ8CEG5 Ifitm6-203ENSMUST00000211330 813 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
Ccdc28bQ8CEG5 AC155922.1-201ENSMUST00000220100 373 ntBASIC5.71□□□□□ -1.5
Ccdc28bQ8CEG5 Gm40271-201ENSMUST00000221752 422 ntTSL 3 BASIC5.71□□□□□ -1.5
Ccdc28bQ8CEG5 1700037F03Rik-201ENSMUST00000223032 365 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Ccdc28bQ8CEG5 AC122459.2-201ENSMUST00000227099 638 ntBASIC5.71□□□□□ -1.5
Ccdc28bQ8CEG5 Gm24411-201ENSMUST00000083428 131 ntBASIC5.71□□□□□ -1.5
Ccdc28bQ8CEG5 Fpr-rs6-201ENSMUST00000095636 1020 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Ccdc28bQ8CEG5 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Ccdc28bQ8CEG5 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Ccdc28bQ8CEG5 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC5.71□□□□□ -1.5
Ccdc28bQ8CEG5 Olfr539-202ENSMUST00000218865 11486 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Ccdc28bQ8CEG5 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ccdc28bQ8CEG5 Zgrf1-202ENSMUST00000195955 3804 ntTSL 2 BASIC5.71□□□□□ -1.5
Ccdc28bQ8CEG5 Serpinb6c-202ENSMUST00000172184 1327 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ccdc28bQ8CEG5 Zfp120-203ENSMUST00000109931 4033 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Ccdc28bQ8CEG5 Phkb-201ENSMUST00000053771 5351 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc28bQ8CEG5 Gm12185-202ENSMUST00000094476 5264 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Ccdc28bQ8CEG5 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc28bQ8CEG5 Ckap5-201ENSMUST00000046769 6511 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc28bQ8CEG5 Gm14569-204ENSMUST00000169499 5181 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Ccdc28bQ8CEG5 Gm36936-201ENSMUST00000194508 2749 ntBASIC5.7□□□□□ -1.5
Ccdc28bQ8CEG5 Gm37589-201ENSMUST00000193609 3994 ntBASIC5.7□□□□□ -1.5
Ccdc28bQ8CEG5 Olfr348-203ENSMUST00000214909 3634 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Ccdc28bQ8CEG5 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc28bQ8CEG5 Gm43317-201ENSMUST00000197924 2544 ntBASIC5.7□□□□□ -1.5
Ccdc28bQ8CEG5 Gm43490-201ENSMUST00000197593 2652 ntBASIC5.7□□□□□ -1.5
Ccdc28bQ8CEG5 Gm22267-201ENSMUST00000104008 131 ntBASIC5.7□□□□□ -1.5
Ccdc28bQ8CEG5 Gm22499-201ENSMUST00000104501 135 ntBASIC5.7□□□□□ -1.5
Ccdc28bQ8CEG5 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc28bQ8CEG5 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc28bQ8CEG5 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Ccdc28bQ8CEG5 Gm12281-201ENSMUST00000119536 298 ntBASIC5.7□□□□□ -1.5
Ccdc28bQ8CEG5 Mrpl48-ps-201ENSMUST00000121413 636 ntBASIC5.7□□□□□ -1.5
Ccdc28bQ8CEG5 4930517O19Rik-201ENSMUST00000140320 603 ntTSL 5 BASIC5.7□□□□□ -1.5
Ccdc28bQ8CEG5 C230035I16Rik-201ENSMUST00000141543 623 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc28bQ8CEG5 Nrbf2-202ENSMUST00000159002 583 ntTSL 3 BASIC5.7□□□□□ -1.5
Ccdc28bQ8CEG5 Gm17024-201ENSMUST00000165676 634 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc28bQ8CEG5 Vmn1r57-201ENSMUST00000170780 933 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Ccdc28bQ8CEG5 Vmn1r9-201ENSMUST00000171186 1051 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Ccdc28bQ8CEG5 Gm17198-201ENSMUST00000171792 1154 ntBASIC5.7□□□□□ -1.5
Ccdc28bQ8CEG5 Obox4-ps31-201ENSMUST00000177210 1137 ntBASIC5.7□□□□□ -1.5
Ccdc28bQ8CEG5 Gm9556-201ENSMUST00000182938 940 ntBASIC5.7□□□□□ -1.5
Ccdc28bQ8CEG5 Gm27004-201ENSMUST00000183300 727 ntBASIC5.7□□□□□ -1.5
Ccdc28bQ8CEG5 Prl8a2-201ENSMUST00000018403 939 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc28bQ8CEG5 Gm28616-201ENSMUST00000187344 441 ntTSL 5 BASIC5.7□□□□□ -1.5
Ccdc28bQ8CEG5 Gm28080-201ENSMUST00000188552 722 ntBASIC5.7□□□□□ -1.5
Ccdc28bQ8CEG5 Gm28066-201ENSMUST00000188657 472 ntBASIC5.7□□□□□ -1.5
Ccdc28bQ8CEG5 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc28bQ8CEG5 Gm21524-201ENSMUST00000190499 696 ntBASIC5.7□□□□□ -1.5
Ccdc28bQ8CEG5 Gm21715-201ENSMUST00000191056 694 ntBASIC5.7□□□□□ -1.5
Ccdc28bQ8CEG5 Gm37341-201ENSMUST00000194680 371 ntBASIC5.7□□□□□ -1.5
Ccdc28bQ8CEG5 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC5.7□□□□□ -1.5
Ccdc28bQ8CEG5 Gm7166-201ENSMUST00000199715 303 ntBASIC5.7□□□□□ -1.5
Ccdc28bQ8CEG5 Gm43124-201ENSMUST00000201878 278 ntBASIC5.7□□□□□ -1.5
Ccdc28bQ8CEG5 Gm43850-201ENSMUST00000202021 578 ntBASIC5.7□□□□□ -1.5
Ccdc28bQ8CEG5 BC049739-201ENSMUST00000202626 660 ntBASIC5.7□□□□□ -1.5
Ccdc28bQ8CEG5 Pttg1-202ENSMUST00000020687 741 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc28bQ8CEG5 Gm45326-201ENSMUST00000209234 721 ntTSL 3 BASIC5.7□□□□□ -1.5
Ccdc28bQ8CEG5 AV026068-220ENSMUST00000224153 1147 ntBASIC5.7□□□□□ -1.5
Ccdc28bQ8CEG5 Raet1d-201ENSMUST00000095795 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc28bQ8CEG5 Gm14296-201ENSMUST00000099007 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc28bQ8CEG5 2210418O10Rik-201ENSMUST00000099009 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc28bQ8CEG5 Olfr250-202ENSMUST00000216168 3969 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Ccdc28bQ8CEG5 Olfr911-ps1-202ENSMUST00000216496 3576 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Ccdc28bQ8CEG5 Setd2-201ENSMUST00000153838 8350 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Ccdc28bQ8CEG5 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc28bQ8CEG5 Zc2hc1a-201ENSMUST00000051064 3292 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc28bQ8CEG5 Ezh1-201ENSMUST00000100417 3636 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Ccdc28bQ8CEG5 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ccdc28bQ8CEG5 Gm44175-201ENSMUST00000204863 4256 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Ccdc28bQ8CEG5 Nlrp5-203ENSMUST00000108441 3375 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ccdc28bQ8CEG5 Nfia-201ENSMUST00000052018 9249 ntTSL 5 BASIC5.69□□□□□ -1.5
Ccdc28bQ8CEG5 9530036O11Rik-202ENSMUST00000181202 2926 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Ccdc28bQ8CEG5 Vmn1r84-201ENSMUST00000086228 2452 ntAPPRIS P2 BASIC5.69□□□□□ -1.5
Ccdc28bQ8CEG5 AC154573.1-201ENSMUST00000225913 4659 ntBASIC5.69□□□□□ -1.5
Ccdc28bQ8CEG5 Vmn2r-ps102-201ENSMUST00000222577 2203 ntBASIC5.69□□□□□ -1.5
Ccdc28bQ8CEG5 Ighv8-12-201ENSMUST00000103540 315 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Ccdc28bQ8CEG5 Gm13641-201ENSMUST00000117993 473 ntBASIC5.69□□□□□ -1.5
Ccdc28bQ8CEG5 Gm14842-201ENSMUST00000119577 269 ntBASIC5.69□□□□□ -1.5
Ccdc28bQ8CEG5 Gm13162-201ENSMUST00000121481 454 ntBASIC5.69□□□□□ -1.5
Ccdc28bQ8CEG5 Gm13077-201ENSMUST00000121941 484 ntBASIC5.69□□□□□ -1.5
Ccdc28bQ8CEG5 BB218582-201ENSMUST00000123623 1024 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Ccdc28bQ8CEG5 Gm14093-201ENSMUST00000145579 364 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Ccdc28bQ8CEG5 Gm16079-201ENSMUST00000149065 578 ntTSL 3 BASIC5.69□□□□□ -1.5
Ccdc28bQ8CEG5 Mir6412-201ENSMUST00000184477 97 ntBASIC5.69□□□□□ -1.5
Ccdc28bQ8CEG5 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Ccdc28bQ8CEG5 Gm38122-201ENSMUST00000192679 885 ntBASIC5.69□□□□□ -1.5
Ccdc28bQ8CEG5 Ighv8-5-201ENSMUST00000194257 358 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Ccdc28bQ8CEG5 Anxa3-202ENSMUST00000196126 453 ntTSL 2 BASIC5.69□□□□□ -1.5
Ccdc28bQ8CEG5 Gm20128-201ENSMUST00000196189 417 ntBASIC5.69□□□□□ -1.5
Ccdc28bQ8CEG5 Mark1-ps2-201ENSMUST00000197823 384 ntBASIC5.69□□□□□ -1.5
Ccdc28bQ8CEG5 Gm9057-201ENSMUST00000198791 296 ntBASIC5.69□□□□□ -1.5
Ccdc28bQ8CEG5 Gm44955-201ENSMUST00000208843 229 ntTSL 5 BASIC5.69□□□□□ -1.5
Ccdc28bQ8CEG5 Gm19921-201ENSMUST00000210505 703 ntBASIC5.69□□□□□ -1.5
Ccdc28bQ8CEG5 AC153845.2-203ENSMUST00000215889 617 ntTSL 3 BASIC5.69□□□□□ -1.5
Ccdc28bQ8CEG5 AC154595.2-201ENSMUST00000225067 310 ntBASIC5.69□□□□□ -1.5
Ccdc28bQ8CEG5 Ninj2-201ENSMUST00000035244 823 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms