Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Mir546-201ENSMUST00000102105 121 ntBASIC5.88□□□□□ -1.47
Trub1Q8C0D0 Igkv8-18-201ENSMUST00000103390 395 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Trub1Q8C0D0 Mup3-202ENSMUST00000107472 916 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Trub1Q8C0D0 B4galt4-202ENSMUST00000114708 734 ntTSL 2 BASIC5.88□□□□□ -1.47
Trub1Q8C0D0 S100a9-202ENSMUST00000117167 519 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Trub1Q8C0D0 Gm13428-201ENSMUST00000117540 365 ntBASIC5.88□□□□□ -1.47
Trub1Q8C0D0 Gm6427-201ENSMUST00000118721 979 ntBASIC5.88□□□□□ -1.47
Trub1Q8C0D0 Gm4914-201ENSMUST00000119757 459 ntBASIC5.88□□□□□ -1.47
Trub1Q8C0D0 Gm5405-201ENSMUST00000120478 609 ntBASIC5.88□□□□□ -1.47
Trub1Q8C0D0 Gm13261-201ENSMUST00000137351 1020 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Trub1Q8C0D0 Gm12301-201ENSMUST00000152963 523 ntTSL 2 BASIC5.88□□□□□ -1.47
Trub1Q8C0D0 Gm8185-201ENSMUST00000160999 669 ntBASIC5.88□□□□□ -1.47
Trub1Q8C0D0 Gm9006-201ENSMUST00000165520 841 ntBASIC5.88□□□□□ -1.47
Trub1Q8C0D0 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC5.88□□□□□ -1.47
Trub1Q8C0D0 Gm29289-201ENSMUST00000188358 576 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Trub1Q8C0D0 Gm29745-201ENSMUST00000198005 687 ntBASIC5.88□□□□□ -1.47
Trub1Q8C0D0 Gm43055-201ENSMUST00000198859 879 ntTSL 3 BASIC5.88□□□□□ -1.47
Trub1Q8C0D0 Gm44422-201ENSMUST00000204142 1025 ntBASIC5.88□□□□□ -1.47
Trub1Q8C0D0 Gm44788-201ENSMUST00000207605 385 ntTSL 5 BASIC5.88□□□□□ -1.47
Trub1Q8C0D0 AC153567.1-201ENSMUST00000218424 1263 ntTSL 5 BASIC5.88□□□□□ -1.47
Trub1Q8C0D0 Gm31904-201ENSMUST00000219446 877 ntTSL 5 BASIC5.88□□□□□ -1.47
Trub1Q8C0D0 Cma2-202ENSMUST00000228263 857 ntBASIC5.88□□□□□ -1.47
Trub1Q8C0D0 AC120375.2-202ENSMUST00000228722 397 ntBASIC5.88□□□□□ -1.47
Trub1Q8C0D0 1700013H16Rik-201ENSMUST00000067940 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Trub1Q8C0D0 S100a9-201ENSMUST00000069960 512 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Trub1Q8C0D0 Fxyd3-201ENSMUST00000072331 439 ntTSL 2 BASIC5.88□□□□□ -1.47
Trub1Q8C0D0 4933411G06Rik-201ENSMUST00000075909 1022 ntBASIC5.88□□□□□ -1.47
Trub1Q8C0D0 Ssxb5-201ENSMUST00000089370 602 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Trub1Q8C0D0 Olfr111-201ENSMUST00000097325 1041 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Trub1Q8C0D0 Gm37589-201ENSMUST00000193609 3994 ntBASIC5.88□□□□□ -1.47
Trub1Q8C0D0 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Trub1Q8C0D0 Gm38414-202ENSMUST00000211253 1405 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Trub1Q8C0D0 Olfr1382-203ENSMUST00000213707 4294 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Trub1Q8C0D0 Olfr1382-204ENSMUST00000213899 4285 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Trub1Q8C0D0 Olfr1382-205ENSMUST00000217564 4287 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Trub1Q8C0D0 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Trub1Q8C0D0 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Trub1Q8C0D0 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Trub1Q8C0D0 Epyc-202ENSMUST00000105285 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Trub1Q8C0D0 Gtdc1-203ENSMUST00000112810 2564 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Trub1Q8C0D0 Vmn2r-ps38-201ENSMUST00000173752 2573 ntBASIC5.88□□□□□ -1.47
Trub1Q8C0D0 Gm37137-201ENSMUST00000195138 2684 ntBASIC5.88□□□□□ -1.47
Trub1Q8C0D0 Zfp27-205ENSMUST00000162592 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Trub1Q8C0D0 AC156569.1-201ENSMUST00000222020 3841 ntBASIC5.88□□□□□ -1.47
Trub1Q8C0D0 Slc22a27-202ENSMUST00000182102 1801 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Trub1Q8C0D0 Gm44676-201ENSMUST00000208520 3055 ntBASIC5.88□□□□□ -1.47
Trub1Q8C0D0 Gm14857-201ENSMUST00000117862 3185 ntBASIC5.88□□□□□ -1.47
Trub1Q8C0D0 Psg27-201ENSMUST00000094794 1942 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Trub1Q8C0D0 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Trub1Q8C0D0 Zfp148-ps1-201ENSMUST00000211201 2453 ntBASIC5.87□□□□□ -1.47
Trub1Q8C0D0 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Trub1Q8C0D0 Adam6b-201ENSMUST00000063317 2547 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Trub1Q8C0D0 Gm38451-201ENSMUST00000208329 2646 ntBASIC5.87□□□□□ -1.47
Trub1Q8C0D0 Ddx4-201ENSMUST00000075748 2762 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
Trub1Q8C0D0 AC122769.3-201ENSMUST00000227739 3245 ntBASIC5.87□□□□□ -1.47
Trub1Q8C0D0 Gm37087-201ENSMUST00000192966 3309 ntBASIC5.87□□□□□ -1.47
Trub1Q8C0D0 Gm37752-201ENSMUST00000193494 3309 ntBASIC5.87□□□□□ -1.47
Trub1Q8C0D0 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Trub1Q8C0D0 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Trub1Q8C0D0 Vmn2r34-201ENSMUST00000173459 3616 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Trub1Q8C0D0 Ear1-201ENSMUST00000100691 713 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Trub1Q8C0D0 Gm22372-201ENSMUST00000104589 136 ntBASIC5.87□□□□□ -1.47
Trub1Q8C0D0 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC5.87□□□□□ -1.47
Trub1Q8C0D0 Gm11774-201ENSMUST00000118601 293 ntBASIC5.87□□□□□ -1.47
Trub1Q8C0D0 Olfr1376-ps1-201ENSMUST00000121306 955 ntBASIC5.87□□□□□ -1.47
Trub1Q8C0D0 Gm11679-201ENSMUST00000121830 779 ntBASIC5.87□□□□□ -1.47
Trub1Q8C0D0 Gm14343-201ENSMUST00000154524 731 ntTSL 3 BASIC5.87□□□□□ -1.47
Trub1Q8C0D0 Gm10177-201ENSMUST00000160052 444 ntBASIC5.87□□□□□ -1.47
Trub1Q8C0D0 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Trub1Q8C0D0 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC5.87□□□□□ -1.47
Trub1Q8C0D0 Gm16531-201ENSMUST00000180658 967 ntBASIC5.87□□□□□ -1.47
Trub1Q8C0D0 Mir6989-201ENSMUST00000184812 65 ntBASIC5.87□□□□□ -1.47
Trub1Q8C0D0 Gm18799-201ENSMUST00000189104 913 ntBASIC5.87□□□□□ -1.47
Trub1Q8C0D0 Gm28996-201ENSMUST00000190316 721 ntBASIC5.87□□□□□ -1.47
Trub1Q8C0D0 Gm38040-201ENSMUST00000193505 225 ntBASIC5.87□□□□□ -1.47
Trub1Q8C0D0 Ighv1-14-201ENSMUST00000194015 402 ntBASIC5.87□□□□□ -1.47
Trub1Q8C0D0 Oaz3-204ENSMUST00000199678 935 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Trub1Q8C0D0 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Trub1Q8C0D0 Gm34165-201ENSMUST00000222012 1174 ntBASIC5.87□□□□□ -1.47
Trub1Q8C0D0 CT485612.1-201ENSMUST00000222555 382 ntBASIC5.87□□□□□ -1.47
Trub1Q8C0D0 AC099934.5-201ENSMUST00000222699 945 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Trub1Q8C0D0 AC126554.2-201ENSMUST00000223259 400 ntBASIC5.87□□□□□ -1.47
Trub1Q8C0D0 AC134917.2-201ENSMUST00000223354 124 ntBASIC5.87□□□□□ -1.47
Trub1Q8C0D0 AC154755.1-201ENSMUST00000225244 537 ntBASIC5.87□□□□□ -1.47
Trub1Q8C0D0 AC166369.2-201ENSMUST00000228403 308 ntBASIC5.87□□□□□ -1.47
Trub1Q8C0D0 Vmn1r67-201ENSMUST00000055964 999 ntAPPRIS P2 BASIC5.87□□□□□ -1.47
Trub1Q8C0D0 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Trub1Q8C0D0 Defa26-201ENSMUST00000074343 372 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Trub1Q8C0D0 1810018F18Rik-203ENSMUST00000189764 1325 ntBASIC5.87□□□□□ -1.47
Trub1Q8C0D0 AC115760.1-201ENSMUST00000225160 1327 ntBASIC5.87□□□□□ -1.47
Trub1Q8C0D0 4930518I15Rik-201ENSMUST00000099141 1331 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Trub1Q8C0D0 Gm40987-202ENSMUST00000221856 1588 ntTSL 5 BASIC5.87□□□□□ -1.47
Trub1Q8C0D0 Gm39327-201ENSMUST00000213594 1982 ntTSL 5 BASIC5.87□□□□□ -1.47
Trub1Q8C0D0 Olfr303-203ENSMUST00000215532 3572 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Trub1Q8C0D0 Olfr55-203ENSMUST00000214891 4428 ntTSL 5 BASIC5.87□□□□□ -1.47
Trub1Q8C0D0 Jade3-202ENSMUST00000115384 4866 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Trub1Q8C0D0 Olfr281-202ENSMUST00000217517 4535 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Trub1Q8C0D0 Dtna-203ENSMUST00000220904 3860 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trub1Q8C0D0 Prg4-206ENSMUST00000161611 3821 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Trub1Q8C0D0 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms