Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm15975-201ENSMUST00000122385 1402 ntBASIC12.31□□□□□ -0.44
Trim41Q5NCC3 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trim41Q5NCC3 Acad11-201ENSMUST00000047799 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim41Q5NCC3 Mir697-201ENSMUST00000102316 109 ntBASIC12.31□□□□□ -0.44
Trim41Q5NCC3 Igkv4-91-201ENSMUST00000103333 358 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trim41Q5NCC3 Igkv4-74-201ENSMUST00000103344 394 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trim41Q5NCC3 n-R5s72-201ENSMUST00000104518 119 ntBASIC12.31□□□□□ -0.44
Trim41Q5NCC3 Gm13835-201ENSMUST00000118459 685 ntBASIC12.31□□□□□ -0.44
Trim41Q5NCC3 BC064078-201ENSMUST00000122939 570 ntBASIC12.31□□□□□ -0.44
Trim41Q5NCC3 Gm23539-201ENSMUST00000157537 224 ntBASIC12.31□□□□□ -0.44
Trim41Q5NCC3 Gm24286-201ENSMUST00000157632 128 ntBASIC12.31□□□□□ -0.44
Trim41Q5NCC3 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC12.31□□□□□ -0.44
Trim41Q5NCC3 Gm2075-201ENSMUST00000180285 435 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trim41Q5NCC3 Gm27348-201ENSMUST00000184511 170 ntBASIC12.31□□□□□ -0.44
Trim41Q5NCC3 Gm28579-201ENSMUST00000186143 369 ntBASIC12.31□□□□□ -0.44
Trim41Q5NCC3 Gm18728-201ENSMUST00000186155 753 ntBASIC12.31□□□□□ -0.44
Trim41Q5NCC3 Gm28066-201ENSMUST00000188657 472 ntBASIC12.31□□□□□ -0.44
Trim41Q5NCC3 Igkv4-73-201ENSMUST00000199760 358 ntBASIC12.31□□□□□ -0.44
Trim41Q5NCC3 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC12.31□□□□□ -0.44
Trim41Q5NCC3 Gm44993-201ENSMUST00000208435 842 ntTSL 3 BASIC12.31□□□□□ -0.44
Trim41Q5NCC3 Gm8058-201ENSMUST00000217247 587 ntBASIC12.31□□□□□ -0.44
Trim41Q5NCC3 AC110381.1-201ENSMUST00000218987 586 ntBASIC12.31□□□□□ -0.44
Trim41Q5NCC3 Gm18601-201ENSMUST00000220831 634 ntBASIC12.31□□□□□ -0.44
Trim41Q5NCC3 AC159263.3-201ENSMUST00000223434 460 ntBASIC12.31□□□□□ -0.44
Trim41Q5NCC3 Tex36-201ENSMUST00000033275 958 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim41Q5NCC3 Cep55-201ENSMUST00000096096 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim41Q5NCC3 Mob1b-202ENSMUST00000113229 8967 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim41Q5NCC3 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC12.31□□□□□ -0.44
Trim41Q5NCC3 Gm37706-201ENSMUST00000195379 2765 ntBASIC12.31□□□□□ -0.44
Trim41Q5NCC3 Fbxw7-203ENSMUST00000107678 4073 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
Trim41Q5NCC3 Prr15l-204ENSMUST00000107636 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim41Q5NCC3 Adgrb3-203ENSMUST00000126626 2953 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim41Q5NCC3 Mtfr1-202ENSMUST00000117529 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim41Q5NCC3 Gm43606-201ENSMUST00000195938 3556 ntBASIC12.31□□□□□ -0.44
Trim41Q5NCC3 Zc3h12b-201ENSMUST00000082183 2831 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trim41Q5NCC3 Cstf2t-201ENSMUST00000066039 3750 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trim41Q5NCC3 Gm18451-201ENSMUST00000196759 1719 ntBASIC12.31□□□□□ -0.44
Trim41Q5NCC3 Sulf1-201ENSMUST00000088585 4630 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim41Q5NCC3 Gm29123-201ENSMUST00000185808 3657 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim41Q5NCC3 Efcab5-201ENSMUST00000108400 4654 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trim41Q5NCC3 Calcr-205ENSMUST00000171613 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim41Q5NCC3 Olfr799-205ENSMUST00000217364 1580 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trim41Q5NCC3 Gm28798-201ENSMUST00000186372 2161 ntTSL 5 BASIC12.3□□□□□ -0.44
Trim41Q5NCC3 Gm29091-201ENSMUST00000187289 2159 ntTSL 5 BASIC12.3□□□□□ -0.44
Trim41Q5NCC3 Trp53cor1-201ENSMUST00000133221 2956 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim41Q5NCC3 Mycbp2-201ENSMUST00000159855 15233 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim41Q5NCC3 Gm26849-201ENSMUST00000180561 1842 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim41Q5NCC3 Cphx1-204ENSMUST00000184016 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim41Q5NCC3 Card6-201ENSMUST00000118365 5995 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trim41Q5NCC3 Gm13102-203ENSMUST00000105761 2281 ntAPPRIS P2 TSL 2 BASIC12.3□□□□□ -0.44
Trim41Q5NCC3 Etv5-203ENSMUST00000168774 3773 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim41Q5NCC3 Plch1-209ENSMUST00000161052 1472 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim41Q5NCC3 Gm805-201ENSMUST00000181667 3160 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim41Q5NCC3 Ear-ps2-201ENSMUST00000100689 466 ntBASIC12.3□□□□□ -0.44
Trim41Q5NCC3 Olfr446-201ENSMUST00000101461 927 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Trim41Q5NCC3 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Trim41Q5NCC3 Lage3-202ENSMUST00000114152 746 ntTSL 2 BASIC12.3□□□□□ -0.44
Trim41Q5NCC3 Gm12492-201ENSMUST00000117665 564 ntBASIC12.3□□□□□ -0.44
Trim41Q5NCC3 Gm15310-201ENSMUST00000117891 372 ntBASIC12.3□□□□□ -0.44
Trim41Q5NCC3 Gm16445-201ENSMUST00000120399 714 ntBASIC12.3□□□□□ -0.44
Trim41Q5NCC3 Gm5646-201ENSMUST00000120568 714 ntBASIC12.3□□□□□ -0.44
Trim41Q5NCC3 Gm14678-201ENSMUST00000121396 482 ntBASIC12.3□□□□□ -0.44
Trim41Q5NCC3 Gm13746-201ENSMUST00000133981 605 ntTSL 3 BASIC12.3□□□□□ -0.44
Trim41Q5NCC3 Gm10057-201ENSMUST00000144098 984 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Trim41Q5NCC3 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC12.3□□□□□ -0.44
Trim41Q5NCC3 Igfl3-201ENSMUST00000152973 575 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim41Q5NCC3 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Trim41Q5NCC3 Gm15143-201ENSMUST00000178180 714 ntBASIC12.3□□□□□ -0.44
Trim41Q5NCC3 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Trim41Q5NCC3 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim41Q5NCC3 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trim41Q5NCC3 Gm5947-201ENSMUST00000179156 714 ntBASIC12.3□□□□□ -0.44
Trim41Q5NCC3 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trim41Q5NCC3 Gm5645-201ENSMUST00000179597 714 ntBASIC12.3□□□□□ -0.44
Trim41Q5NCC3 1810053B23Rik-202ENSMUST00000185364 590 ntTSL 3 BASIC12.3□□□□□ -0.44
Trim41Q5NCC3 Gm29813-201ENSMUST00000195856 447 ntBASIC12.3□□□□□ -0.44
Trim41Q5NCC3 Gm44300-201ENSMUST00000196792 121 ntBASIC12.3□□□□□ -0.44
Trim41Q5NCC3 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC12.3□□□□□ -0.44
Trim41Q5NCC3 Gm7463-201ENSMUST00000201541 547 ntBASIC12.3□□□□□ -0.44
Trim41Q5NCC3 Gm3279-201ENSMUST00000203099 1092 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim41Q5NCC3 Gm45646-201ENSMUST00000210983 441 ntTSL 5 BASIC12.3□□□□□ -0.44
Trim41Q5NCC3 Ctla2b-201ENSMUST00000021884 842 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim41Q5NCC3 Gm10264-201ENSMUST00000220589 429 ntBASIC12.3□□□□□ -0.44
Trim41Q5NCC3 Gm4052-201ENSMUST00000220890 451 ntBASIC12.3□□□□□ -0.44
Trim41Q5NCC3 Gm18940-201ENSMUST00000222518 871 ntBASIC12.3□□□□□ -0.44
Trim41Q5NCC3 Gm2840-201ENSMUST00000048361 411 ntBASIC12.3□□□□□ -0.44
Trim41Q5NCC3 Ssh2-201ENSMUST00000037912 9178 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim41Q5NCC3 Olfr972-203ENSMUST00000216167 1522 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trim41Q5NCC3 Gm20560-201ENSMUST00000204577 3513 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim41Q5NCC3 Zfp874a-201ENSMUST00000057241 2210 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim41Q5NCC3 Olfr1320-203ENSMUST00000214375 1831 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trim41Q5NCC3 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim41Q5NCC3 Maats1-202ENSMUST00000114740 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim41Q5NCC3 Ccdc80-202ENSMUST00000099498 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim41Q5NCC3 Pan2-203ENSMUST00000218315 4379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim41Q5NCC3 Zhx3-201ENSMUST00000103111 9563 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim41Q5NCC3 Kdm5d-207ENSMUST00000189069 2177 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim41Q5NCC3 Rapgef5-205ENSMUST00000222105 2677 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim41Q5NCC3 Zcchc6-201ENSMUST00000071703 5869 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim41Q5NCC3 Etl4-206ENSMUST00000114608 6635 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 85 ms