Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Eri2-203ENSMUST00000106523 973 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Sf3b6P59708 Gm25507-201ENSMUST00000116981 144 ntBASIC6.09□□□□□ -1.43
Sf3b6P59708 Klrd1-203ENSMUST00000119520 919 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Sf3b6P59708 Gm14125-202ENSMUST00000120921 756 ntBASIC6.09□□□□□ -1.43
Sf3b6P59708 Gm16006-201ENSMUST00000160938 566 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Sf3b6P59708 Gm17217-201ENSMUST00000166613 469 ntBASIC6.09□□□□□ -1.43
Sf3b6P59708 Gm7502-201ENSMUST00000169235 733 ntBASIC6.09□□□□□ -1.43
Sf3b6P59708 Smarca2-210ENSMUST00000176475 983 ntTSL 5 BASIC6.09□□□□□ -1.43
Sf3b6P59708 Gm24923-201ENSMUST00000178201 88 ntBASIC6.09□□□□□ -1.43
Sf3b6P59708 Gm26665-201ENSMUST00000181378 839 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Sf3b6P59708 Gm29566-201ENSMUST00000190627 457 ntTSL 5 BASIC6.09□□□□□ -1.43
Sf3b6P59708 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC6.09□□□□□ -1.43
Sf3b6P59708 Gm1647-201ENSMUST00000195406 735 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Sf3b6P59708 Gm9632-201ENSMUST00000195934 643 ntBASIC6.09□□□□□ -1.43
Sf3b6P59708 Gm43160-201ENSMUST00000196453 421 ntBASIC6.09□□□□□ -1.43
Sf3b6P59708 Gm42938-201ENSMUST00000198414 1072 ntBASIC6.09□□□□□ -1.43
Sf3b6P59708 Hcfc1r1-ps1-201ENSMUST00000198911 346 ntBASIC6.09□□□□□ -1.43
Sf3b6P59708 Ccl24-202ENSMUST00000201401 561 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Sf3b6P59708 Gm18327-201ENSMUST00000202426 830 ntBASIC6.09□□□□□ -1.43
Sf3b6P59708 AC124399.1-201ENSMUST00000218334 590 ntBASIC6.09□□□□□ -1.43
Sf3b6P59708 Olfr923-204ENSMUST00000219798 1068 ntBASIC6.09□□□□□ -1.43
Sf3b6P59708 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC6.09□□□□□ -1.43
Sf3b6P59708 4930549C15Rik-201ENSMUST00000221235 1260 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Sf3b6P59708 CT030182.4-201ENSMUST00000223647 645 ntBASIC6.09□□□□□ -1.43
Sf3b6P59708 AV026068-229ENSMUST00000225516 595 ntBASIC6.09□□□□□ -1.43
Sf3b6P59708 Olfr923-201ENSMUST00000051238 1068 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Sf3b6P59708 Eri2-202ENSMUST00000063902 1241 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Sf3b6P59708 Lats2-203ENSMUST00000077981 786 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Sf3b6P59708 Olfr784-201ENSMUST00000082342 960 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Sf3b6P59708 n-R5s60-201ENSMUST00000083299 119 ntBASIC6.09□□□□□ -1.43
Sf3b6P59708 Gm26176-201ENSMUST00000083795 105 ntBASIC6.09□□□□□ -1.43
Sf3b6P59708 Gm10221-201ENSMUST00000088299 309 ntBASIC6.09□□□□□ -1.43
Sf3b6P59708 Olfr1116-201ENSMUST00000090717 924 ntAPPRIS P2 BASIC6.09□□□□□ -1.43
Sf3b6P59708 Gm43335-201ENSMUST00000198299 3276 ntBASIC6.09□□□□□ -1.43
Sf3b6P59708 Rpe65-201ENSMUST00000029824 1602 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Sf3b6P59708 BC053393-201ENSMUST00000050937 2020 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Sf3b6P59708 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Sf3b6P59708 Utp20-201ENSMUST00000004470 8821 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
Sf3b6P59708 Ifi207-201ENSMUST00000042610 3422 ntAPPRIS P2 TSL 5 BASIC6.09□□□□□ -1.44
Sf3b6P59708 Akap9-201ENSMUST00000044492 13123 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Sf3b6P59708 Arhgef12-201ENSMUST00000072767 10059 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.44
Sf3b6P59708 Trpm8-204ENSMUST00000171176 3723 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Sf3b6P59708 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC6.09□□□□□ -1.44
Sf3b6P59708 AC130831.1-201ENSMUST00000224546 1474 ntBASIC6.09□□□□□ -1.44
Sf3b6P59708 Agps-203ENSMUST00000175646 1839 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.44
Sf3b6P59708 Gm37254-201ENSMUST00000193542 3901 ntBASIC6.08□□□□□ -1.44
Sf3b6P59708 Gm5949-201ENSMUST00000213468 1421 ntBASIC6.08□□□□□ -1.44
Sf3b6P59708 Aph1c-202ENSMUST00000169282 5205 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sf3b6P59708 Pank1-202ENSMUST00000112460 2759 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sf3b6P59708 Gulp1-206ENSMUST00000162600 2798 ntTSL 5 BASIC6.08□□□□□ -1.44
Sf3b6P59708 Mrpl1-201ENSMUST00000036437 3431 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sf3b6P59708 Ank3-215ENSMUST00000182269 4411 ntTSL 5 BASIC6.08□□□□□ -1.44
Sf3b6P59708 Birc6-204ENSMUST00000182133 14604 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Sf3b6P59708 Birc6-215ENSMUST00000182597 14649 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sf3b6P59708 Birc6-220ENSMUST00000182944 14610 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Sf3b6P59708 Ift80-202ENSMUST00000107812 4063 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Sf3b6P59708 Gm12703-201ENSMUST00000145411 2039 ntTSL 2 BASIC6.08□□□□□ -1.44
Sf3b6P59708 Dnah10-201ENSMUST00000058440 14038 ntAPPRIS P2 TSL 5 BASIC6.08□□□□□ -1.44
Sf3b6P59708 Angptl1-202ENSMUST00000111720 1332 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Sf3b6P59708 Ptbp3-212ENSMUST00000174586 6640 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Sf3b6P59708 Olfr726-205ENSMUST00000215278 1324 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
Sf3b6P59708 Olfr726-208ENSMUST00000217422 1302 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Sf3b6P59708 Celf2-214ENSMUST00000170438 8856 ntTSL 5 BASIC6.08□□□□□ -1.44
Sf3b6P59708 Vmn1r58-204ENSMUST00000228728 9991 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Sf3b6P59708 Pikfyve-201ENSMUST00000081154 11237 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sf3b6P59708 Ctage5-202ENSMUST00000069430 2869 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Sf3b6P59708 Iglv1-201ENSMUST00000103746 391 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Sf3b6P59708 Gm24935-201ENSMUST00000103770 110 ntBASIC6.08□□□□□ -1.44
Sf3b6P59708 Gm22019-201ENSMUST00000104359 96 ntBASIC6.08□□□□□ -1.44
Sf3b6P59708 Plac1-202ENSMUST00000114843 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sf3b6P59708 Tex35-202ENSMUST00000118207 912 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sf3b6P59708 Gm14727-201ENSMUST00000118526 525 ntBASIC6.08□□□□□ -1.44
Sf3b6P59708 Gm14887-201ENSMUST00000119522 663 ntBASIC6.08□□□□□ -1.44
Sf3b6P59708 4930448K20Rik-201ENSMUST00000120570 998 ntBASIC6.08□□□□□ -1.44
Sf3b6P59708 Gm11257-201ENSMUST00000121313 315 ntBASIC6.08□□□□□ -1.44
Sf3b6P59708 Gm14721-201ENSMUST00000121381 525 ntBASIC6.08□□□□□ -1.44
Sf3b6P59708 Gm11344-201ENSMUST00000122011 335 ntBASIC6.08□□□□□ -1.44
Sf3b6P59708 Hnf1aos1-203ENSMUST00000131845 740 ntTSL 3 BASIC6.08□□□□□ -1.44
Sf3b6P59708 Gm11816-202ENSMUST00000149848 714 ntTSL 2 BASIC6.08□□□□□ -1.44
Sf3b6P59708 Gm22206-201ENSMUST00000158612 116 ntBASIC6.08□□□□□ -1.44
Sf3b6P59708 Gm9587-201ENSMUST00000172449 454 ntBASIC6.08□□□□□ -1.44
Sf3b6P59708 Gm20549-201ENSMUST00000174804 429 ntBASIC6.08□□□□□ -1.44
Sf3b6P59708 Gm20625-201ENSMUST00000177065 698 ntTSL 3 BASIC6.08□□□□□ -1.44
Sf3b6P59708 Gm20795-201ENSMUST00000178528 699 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Sf3b6P59708 Mir6357-201ENSMUST00000184246 104 ntBASIC6.08□□□□□ -1.44
Sf3b6P59708 Mir6409-201ENSMUST00000184957 92 ntBASIC6.08□□□□□ -1.44
Sf3b6P59708 Gm28894-201ENSMUST00000185214 615 ntBASIC6.08□□□□□ -1.44
Sf3b6P59708 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Sf3b6P59708 Gm2979-201ENSMUST00000193442 463 ntBASIC6.08□□□□□ -1.44
Sf3b6P59708 Gm7897-201ENSMUST00000193981 554 ntBASIC6.08□□□□□ -1.44
Sf3b6P59708 Gm37369-201ENSMUST00000194179 615 ntBASIC6.08□□□□□ -1.44
Sf3b6P59708 Ighv1-10-201ENSMUST00000194372 355 ntBASIC6.08□□□□□ -1.44
Sf3b6P59708 Gm20940-201ENSMUST00000197308 360 ntBASIC6.08□□□□□ -1.44
Sf3b6P59708 Rpl9-ps8-201ENSMUST00000198343 562 ntBASIC6.08□□□□□ -1.44
Sf3b6P59708 1700034P13Rik-206ENSMUST00000207445 1146 ntTSL 5 BASIC6.08□□□□□ -1.44
Sf3b6P59708 Gm45659-201ENSMUST00000209295 564 ntTSL 2 BASIC6.08□□□□□ -1.44
Sf3b6P59708 Gm45514-201ENSMUST00000211531 689 ntBASIC6.08□□□□□ -1.44
Sf3b6P59708 Olfr1075-ps1-201ENSMUST00000214201 470 ntBASIC6.08□□□□□ -1.44
Sf3b6P59708 AC102582.2-201ENSMUST00000214658 1137 ntTSL 5 BASIC6.08□□□□□ -1.44
Sf3b6P59708 Gm19599-201ENSMUST00000218898 358 ntBASIC6.08□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms