Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Zfp971-201ENSMUST00000108925 923 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Shmt1P50431 Cd47-202ENSMUST00000114496 867 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Shmt1P50431 Spink8-201ENSMUST00000118732 637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Shmt1P50431 Gm13690-201ENSMUST00000118989 285 ntBASIC6.51□□□□□ -1.37
Shmt1P50431 Olfr607-201ENSMUST00000119283 915 ntAPPRIS ALT2 BASIC6.51□□□□□ -1.37
Shmt1P50431 Olfr1004-ps1-201ENSMUST00000120361 580 ntBASIC6.51□□□□□ -1.37
Shmt1P50431 Gm15780-201ENSMUST00000121283 935 ntBASIC6.51□□□□□ -1.37
Shmt1P50431 Gm13502-201ENSMUST00000121574 684 ntBASIC6.51□□□□□ -1.37
Shmt1P50431 Olfr1021-ps1-201ENSMUST00000121914 1042 ntAPPRIS P1 TSL 3 BASIC6.51□□□□□ -1.37
Shmt1P50431 Klra17-202ENSMUST00000122219 1167 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Shmt1P50431 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC6.51□□□□□ -1.37
Shmt1P50431 Tmem216-205ENSMUST00000145210 774 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Shmt1P50431 1700109G15Rik-201ENSMUST00000150735 384 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Shmt1P50431 Gm23553-201ENSMUST00000157817 295 ntBASIC6.51□□□□□ -1.37
Shmt1P50431 Gm24359-201ENSMUST00000158418 221 ntBASIC6.51□□□□□ -1.37
Shmt1P50431 1600029O15Rik-201ENSMUST00000178259 517 ntBASIC6.51□□□□□ -1.37
Shmt1P50431 Gm27460-201ENSMUST00000184213 100 ntBASIC6.51□□□□□ -1.37
Shmt1P50431 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC6.51□□□□□ -1.37
Shmt1P50431 Gm29191-201ENSMUST00000185427 621 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Shmt1P50431 C030007H22Rik-201ENSMUST00000186258 591 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Shmt1P50431 Gm29426-202ENSMUST00000186564 536 ntTSL 5 BASIC6.51□□□□□ -1.37
Shmt1P50431 Olfr1252-201ENSMUST00000186710 1099 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Shmt1P50431 Gm29492-201ENSMUST00000187124 457 ntBASIC6.51□□□□□ -1.37
Shmt1P50431 Gm28486-201ENSMUST00000188443 621 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Shmt1P50431 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Shmt1P50431 Gm29551-201ENSMUST00000190913 698 ntBASIC6.51□□□□□ -1.37
Shmt1P50431 Gm32950-201ENSMUST00000193336 232 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Shmt1P50431 Gm34716-201ENSMUST00000194060 621 ntTSL 5 BASIC6.51□□□□□ -1.37
Shmt1P50431 Gm42509-201ENSMUST00000197390 781 ntBASIC6.51□□□□□ -1.37
Shmt1P50431 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC6.51□□□□□ -1.37
Shmt1P50431 Gm18748-201ENSMUST00000198507 622 ntBASIC6.51□□□□□ -1.37
Shmt1P50431 Gm35570-201ENSMUST00000198730 681 ntBASIC6.51□□□□□ -1.37
Shmt1P50431 Gm43090-201ENSMUST00000202459 314 ntBASIC6.51□□□□□ -1.37
Shmt1P50431 Clec2j-202ENSMUST00000203658 606 ntBASIC6.51□□□□□ -1.37
Shmt1P50431 Gm45602-202ENSMUST00000211703 1036 ntTSL 5 BASIC6.51□□□□□ -1.37
Shmt1P50431 Cx3cl1-205ENSMUST00000211947 377 ntTSL 5 BASIC6.51□□□□□ -1.37
Shmt1P50431 Gm33619-201ENSMUST00000215633 662 ntTSL 2 BASIC6.51□□□□□ -1.37
Shmt1P50431 Gm8863-201ENSMUST00000216630 926 ntBASIC6.51□□□□□ -1.37
Shmt1P50431 AC154295.1-201ENSMUST00000217210 621 ntTSL 3 BASIC6.51□□□□□ -1.37
Shmt1P50431 AC153526.1-201ENSMUST00000219750 190 ntBASIC6.51□□□□□ -1.37
Shmt1P50431 Gm34557-201ENSMUST00000223115 375 ntTSL 3 BASIC6.51□□□□□ -1.37
Shmt1P50431 AC129537.1-201ENSMUST00000226596 1228 ntBASIC6.51□□□□□ -1.37
Shmt1P50431 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Shmt1P50431 Gm5436-201ENSMUST00000058103 643 ntBASIC6.51□□□□□ -1.37
Shmt1P50431 Olfr794-201ENSMUST00000059957 963 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Shmt1P50431 Tas2r102-201ENSMUST00000069268 1044 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Shmt1P50431 Olfr307-201ENSMUST00000069279 1012 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Shmt1P50431 Gml-201ENSMUST00000096400 957 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Shmt1P50431 Zfp970-201ENSMUST00000099002 794 ntTSL 2 BASIC6.51□□□□□ -1.37
Shmt1P50431 Gm14391-201ENSMUST00000099028 473 ntTSL 5 BASIC6.51□□□□□ -1.37
Shmt1P50431 Ms4a1-201ENSMUST00000169159 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Shmt1P50431 Gm9597-202ENSMUST00000227632 1387 ntBASIC6.51□□□□□ -1.37
Shmt1P50431 Crtam-203ENSMUST00000180872 4443 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Shmt1P50431 Olfr720-202ENSMUST00000206298 4437 ntAPPRIS P1 TSL 3 BASIC6.51□□□□□ -1.37
Shmt1P50431 Pkd1l3-202ENSMUST00000109242 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Shmt1P50431 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
Shmt1P50431 Gm5832-201ENSMUST00000121704 1582 ntBASIC6.51□□□□□ -1.37
Shmt1P50431 Vmn2r3-202ENSMUST00000176328 2748 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
Shmt1P50431 Gm21051-201ENSMUST00000221757 1688 ntBASIC6.51□□□□□ -1.37
Shmt1P50431 Galnt13-201ENSMUST00000068595 1671 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Shmt1P50431 Stk4-202ENSMUST00000088291 4098 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Shmt1P50431 Cep57l1-204ENSMUST00000186239 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Shmt1P50431 Gm42940-201ENSMUST00000200361 2362 ntBASIC6.51□□□□□ -1.37
Shmt1P50431 Gm43953-201ENSMUST00000203709 2867 ntBASIC6.51□□□□□ -1.37
Shmt1P50431 Gm27013-202ENSMUST00000205067 1436 ntBASIC6.5□□□□□ -1.37
Shmt1P50431 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Shmt1P50431 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC6.5□□□□□ -1.37
Shmt1P50431 Mndal-201ENSMUST00000111210 1907 ntAPPRIS P2 TSL 5 BASIC6.5□□□□□ -1.37
Shmt1P50431 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Shmt1P50431 C230038L03Rik-201ENSMUST00000129409 2632 ntTSL 2 BASIC6.5□□□□□ -1.37
Shmt1P50431 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Shmt1P50431 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Shmt1P50431 Olfr1513-202ENSMUST00000215147 2873 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Shmt1P50431 AC164567.3-201ENSMUST00000217743 2869 ntBASIC6.5□□□□□ -1.37
Shmt1P50431 Lncenc1-202ENSMUST00000179324 2764 ntTSL 2 BASIC6.5□□□□□ -1.37
Shmt1P50431 Pramel7-201ENSMUST00000026957 1861 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Shmt1P50431 Cpne3-201ENSMUST00000029885 5648 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Shmt1P50431 Gm44102-201ENSMUST00000204031 1666 ntBASIC6.5□□□□□ -1.37
Shmt1P50431 Xpo1-204ENSMUST00000109551 4906 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Shmt1P50431 Gm11516-201ENSMUST00000118450 1582 ntBASIC6.5□□□□□ -1.37
Shmt1P50431 4930435E12Rik-201ENSMUST00000122078 1368 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Shmt1P50431 Gm43178-201ENSMUST00000197257 1386 ntBASIC6.5□□□□□ -1.37
Shmt1P50431 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Shmt1P50431 Med21-203ENSMUST00000111650 572 ntTSL 2 BASIC6.5□□□□□ -1.37
Shmt1P50431 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Shmt1P50431 Rpl12-ps1-201ENSMUST00000116168 498 ntBASIC6.5□□□□□ -1.37
Shmt1P50431 Gm13811-201ENSMUST00000117800 256 ntBASIC6.5□□□□□ -1.37
Shmt1P50431 Gm15090-201ENSMUST00000118787 1196 ntBASIC6.5□□□□□ -1.37
Shmt1P50431 Gm11866-201ENSMUST00000120209 335 ntBASIC6.5□□□□□ -1.37
Shmt1P50431 Gm13998-201ENSMUST00000120952 335 ntBASIC6.5□□□□□ -1.37
Shmt1P50431 Olfr349-ps1-201ENSMUST00000121879 609 ntBASIC6.5□□□□□ -1.37
Shmt1P50431 Gm15089-201ENSMUST00000122332 1196 ntBASIC6.5□□□□□ -1.37
Shmt1P50431 Gm11184-201ENSMUST00000126437 268 ntTSL 3 BASIC6.5□□□□□ -1.37
Shmt1P50431 Gm15600-201ENSMUST00000153522 856 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Shmt1P50431 Gm23897-201ENSMUST00000158110 158 ntBASIC6.5□□□□□ -1.37
Shmt1P50431 Gm3453-202ENSMUST00000178308 618 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Shmt1P50431 Gm3127-203ENSMUST00000178386 618 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Shmt1P50431 Gm3685-202ENSMUST00000179199 618 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Shmt1P50431 Spata17-208ENSMUST00000184543 667 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Shmt1P50431 Gm29474-201ENSMUST00000187688 379 ntBASIC6.5□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms