Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Hyal4-201ENSMUST00000031691 3269 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Cdx2P43241 Cd96-201ENSMUST00000023336 2184 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Cdx2P43241 B3gnt5-201ENSMUST00000079780 4258 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Cdx2P43241 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Cdx2P43241 Gm16325-201ENSMUST00000141199 3174 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Cdx2P43241 Ttk-201ENSMUST00000070326 2871 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Cdx2P43241 Poln-206ENSMUST00000202638 2814 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Cdx2P43241 Gm30382-203ENSMUST00000199503 1858 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Cdx2P43241 Ccdc186-201ENSMUST00000076085 2754 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Cdx2P43241 Gm9923-201ENSMUST00000217785 1836 ntBASIC5.6□□□□□ -1.51
Cdx2P43241 Olfr734-203ENSMUST00000217152 4416 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Cdx2P43241 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Cdx2P43241 Gla-201ENSMUST00000033621 3172 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Cdx2P43241 Pcdh15-211ENSMUST00000126920 6866 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Cdx2P43241 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Cdx2P43241 Rbpj-202ENSMUST00000087360 5252 ntTSL 5 BASIC5.59□□□□□ -1.51
Cdx2P43241 Enpp2-204ENSMUST00000173516 2887 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Cdx2P43241 Zfp994-201ENSMUST00000179996 4880 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Cdx2P43241 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Cdx2P43241 Enpp2-202ENSMUST00000167541 2664 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Cdx2P43241 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Cdx2P43241 Plcb4-202ENSMUST00000110109 5217 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Cdx2P43241 Ankrd55-205ENSMUST00000223871 3209 ntBASIC5.59□□□□□ -1.51
Cdx2P43241 Gm37082-201ENSMUST00000192629 1927 ntBASIC5.59□□□□□ -1.51
Cdx2P43241 Gm5725-201ENSMUST00000105195 924 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Cdx2P43241 Gm14326-201ENSMUST00000108928 767 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Cdx2P43241 Gm11908-201ENSMUST00000117755 347 ntBASIC5.59□□□□□ -1.51
Cdx2P43241 Gm14755-201ENSMUST00000118037 384 ntBASIC5.59□□□□□ -1.51
Cdx2P43241 Oosp3-202ENSMUST00000119053 621 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Cdx2P43241 Gm12808-201ENSMUST00000120597 404 ntBASIC5.59□□□□□ -1.51
Cdx2P43241 Gm6305-201ENSMUST00000121027 1012 ntBASIC5.59□□□□□ -1.51
Cdx2P43241 n-R5s48-201ENSMUST00000122482 110 ntBASIC5.59□□□□□ -1.51
Cdx2P43241 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
Cdx2P43241 Vmn1r129-201ENSMUST00000165961 924 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Cdx2P43241 Gm8720-201ENSMUST00000168392 924 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Cdx2P43241 Hspe1-ps3-201ENSMUST00000172726 277 ntBASIC5.59□□□□□ -1.51
Cdx2P43241 Gm3307-201ENSMUST00000176164 632 ntBASIC5.59□□□□□ -1.51
Cdx2P43241 Gm29124-201ENSMUST00000186576 452 ntBASIC5.59□□□□□ -1.51
Cdx2P43241 Gm28238-201ENSMUST00000188102 383 ntTSL 5 BASIC5.59□□□□□ -1.51
Cdx2P43241 Gm8826-201ENSMUST00000193161 948 ntBASIC5.59□□□□□ -1.51
Cdx2P43241 Gm37070-201ENSMUST00000193272 460 ntBASIC5.59□□□□□ -1.51
Cdx2P43241 A330069K06Rik-201ENSMUST00000194077 917 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Cdx2P43241 Gm2429-201ENSMUST00000194635 586 ntBASIC5.59□□□□□ -1.51
Cdx2P43241 Gm43348-201ENSMUST00000197867 530 ntTSL 3 BASIC5.59□□□□□ -1.51
Cdx2P43241 Gm44330-201ENSMUST00000200106 143 ntBASIC5.59□□□□□ -1.51
Cdx2P43241 Gm44132-201ENSMUST00000205142 151 ntBASIC5.59□□□□□ -1.51
Cdx2P43241 Gm44199-201ENSMUST00000205219 739 ntTSL 3 BASIC5.59□□□□□ -1.51
Cdx2P43241 Gm45075-201ENSMUST00000208426 649 ntTSL 3 BASIC5.59□□□□□ -1.51
Cdx2P43241 Elovl2-201ENSMUST00000021793 3840 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Cdx2P43241 Gm6049-201ENSMUST00000222369 458 ntBASIC5.59□□□□□ -1.51
Cdx2P43241 Agr3-201ENSMUST00000042101 826 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Cdx2P43241 Stxbp3-ps-201ENSMUST00000090527 758 ntBASIC5.59□□□□□ -1.51
Cdx2P43241 Gm17165-201ENSMUST00000096155 493 ntBASIC5.59□□□□□ -1.51
Cdx2P43241 Gm765-201ENSMUST00000164491 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Cdx2P43241 Gm45117-201ENSMUST00000207250 1774 ntBASIC5.59□□□□□ -1.51
Cdx2P43241 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Cdx2P43241 Gbp9-201ENSMUST00000031238 4381 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Cdx2P43241 AC116950.1-201ENSMUST00000226322 3250 ntBASIC5.59□□□□□ -1.52
Cdx2P43241 Gm36936-201ENSMUST00000194508 2749 ntBASIC5.59□□□□□ -1.52
Cdx2P43241 Gm38224-201ENSMUST00000191648 2100 ntBASIC5.59□□□□□ -1.52
Cdx2P43241 Sorbs2-231ENSMUST00000171337 5651 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.52
Cdx2P43241 Olfr1239-203ENSMUST00000217181 1516 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Cdx2P43241 Olfr119-201ENSMUST00000080483 1541 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Cdx2P43241 Glb1l3-203ENSMUST00000210274 2532 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Cdx2P43241 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Cdx2P43241 Zdhhc17-201ENSMUST00000041723 4548 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Cdx2P43241 Zfp619-201ENSMUST00000108015 5969 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Cdx2P43241 Gm10648-201ENSMUST00000207552 2902 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Cdx2P43241 Gm42894-201ENSMUST00000200788 3390 ntBASIC5.58□□□□□ -1.52
Cdx2P43241 Vmn1r35-204ENSMUST00000227749 2254 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Cdx2P43241 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC5.58□□□□□ -1.52
Cdx2P43241 Olfr527-202ENSMUST00000214143 3094 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Cdx2P43241 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Cdx2P43241 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Cdx2P43241 Ighv1-64-201ENSMUST00000103535 405 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Cdx2P43241 Gm25758-201ENSMUST00000103987 129 ntBASIC5.58□□□□□ -1.52
Cdx2P43241 Svs3a-202ENSMUST00000109370 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Cdx2P43241 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC5.58□□□□□ -1.52
Cdx2P43241 Gm5751-201ENSMUST00000115561 444 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Cdx2P43241 Olfr1376-ps1-201ENSMUST00000121306 955 ntBASIC5.58□□□□□ -1.52
Cdx2P43241 Gm11734-201ENSMUST00000132261 728 ntTSL 3 BASIC5.58□□□□□ -1.52
Cdx2P43241 4930513N10Rik-202ENSMUST00000132616 490 ntTSL 3 BASIC5.58□□□□□ -1.52
Cdx2P43241 Gm23774-201ENSMUST00000158990 131 ntBASIC5.58□□□□□ -1.52
Cdx2P43241 Gm15810-201ENSMUST00000160241 681 ntTSL 3 BASIC5.58□□□□□ -1.52
Cdx2P43241 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Cdx2P43241 Gm10269-201ENSMUST00000165229 372 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Cdx2P43241 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Cdx2P43241 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Cdx2P43241 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Cdx2P43241 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Cdx2P43241 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Cdx2P43241 Mir6539-201ENSMUST00000183732 110 ntBASIC5.58□□□□□ -1.52
Cdx2P43241 Gm27209-201ENSMUST00000183834 898 ntTSL 3 BASIC5.58□□□□□ -1.52
Cdx2P43241 Gm27855-201ENSMUST00000184122 128 ntBASIC5.58□□□□□ -1.52
Cdx2P43241 Gm18728-201ENSMUST00000186155 753 ntBASIC5.58□□□□□ -1.52
Cdx2P43241 Gm29072-201ENSMUST00000191149 678 ntBASIC5.58□□□□□ -1.52
Cdx2P43241 Oaz3-201ENSMUST00000191506 732 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
Cdx2P43241 Gm42716-201ENSMUST00000196003 680 ntTSL 5 BASIC5.58□□□□□ -1.52
Cdx2P43241 S100a14-203ENSMUST00000199538 483 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
Cdx2P43241 Gm5554-201ENSMUST00000199726 1206 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms