Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 AF067061-201ENSMUST00000179905 1174 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
HttP42859 Gm27202-201ENSMUST00000183838 512 ntTSL 5 BASIC5.86□□□□□ -1.47
HttP42859 Gm37209-201ENSMUST00000194109 1276 ntBASIC5.86□□□□□ -1.47
HttP42859 Gm18553-201ENSMUST00000194152 634 ntBASIC5.86□□□□□ -1.47
HttP42859 Gm19880-201ENSMUST00000207731 318 ntBASIC5.86□□□□□ -1.47
HttP42859 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC5.86□□□□□ -1.47
HttP42859 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HttP42859 AC122346.1-201ENSMUST00000225266 3732 ntBASIC5.86□□□□□ -1.47
HttP42859 Gm17638-201ENSMUST00000181255 4343 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HttP42859 Atp8a1-207ENSMUST00000135930 8069 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HttP42859 Brca2-210ENSMUST00000202313 10517 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HttP42859 Aagab-201ENSMUST00000041551 5294 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HttP42859 Gm17435-201ENSMUST00000181452 2994 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HttP42859 Cntrl-203ENSMUST00000113032 7085 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
HttP42859 Gm12520-201ENSMUST00000117493 316 ntBASIC5.86□□□□□ -1.47
HttP42859 Med9os-202ENSMUST00000139794 446 ntTSL 3 BASIC5.86□□□□□ -1.47
HttP42859 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
HttP42859 Gm28685-201ENSMUST00000187545 1101 ntBASIC5.86□□□□□ -1.47
HttP42859 Gm5734-201ENSMUST00000189787 913 ntBASIC5.86□□□□□ -1.47
HttP42859 Gm8861-201ENSMUST00000196346 832 ntBASIC5.86□□□□□ -1.47
HttP42859 Gm8891-201ENSMUST00000198546 832 ntBASIC5.86□□□□□ -1.47
HttP42859 Mitf-208ENSMUST00000203938 1074 ntTSL 5 BASIC5.86□□□□□ -1.47
HttP42859 2310002D06Rik-201ENSMUST00000218103 508 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HttP42859 Olfr665-203ENSMUST00000216257 2298 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
HttP42859 Olfr1342-202ENSMUST00000216226 3269 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
HttP42859 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
HttP42859 Gm28672-201ENSMUST00000188727 1490 ntTSL 5 BASIC5.86□□□□□ -1.47
HttP42859 Olfr1346-202ENSMUST00000207658 4429 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
HttP42859 Ubtfl1-202ENSMUST00000164441 2639 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HttP42859 4933440M02Rik-201ENSMUST00000061823 3801 ntTSL 2 BASIC5.86□□□□□ -1.47
HttP42859 Sec16a-201ENSMUST00000091252 8737 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
HttP42859 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC5.86□□□□□ -1.47
HttP42859 Vmn1r44-204ENSMUST00000226171 1877 ntBASIC5.86□□□□□ -1.47
HttP42859 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
HttP42859 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HttP42859 Lrrc15-201ENSMUST00000064606 5310 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HttP42859 Ogdh-202ENSMUST00000081894 4114 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HttP42859 A230072E10Rik-202ENSMUST00000175825 3292 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HttP42859 Gm13232-201ENSMUST00000121816 632 ntBASIC5.85□□□□□ -1.47
HttP42859 Gm32308-201ENSMUST00000203053 280 ntBASIC5.85□□□□□ -1.47
HttP42859 AC136376.1-201ENSMUST00000228496 950 ntBASIC5.85□□□□□ -1.47
HttP42859 Spata6-203ENSMUST00000084354 2239 ntTSL 5 BASIC5.85□□□□□ -1.47
HttP42859 Vwa3a-205ENSMUST00000167213 4148 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HttP42859 B230354K17Rik-201ENSMUST00000181149 4897 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HttP42859 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HttP42859 5830444B04Rik-204ENSMUST00000166921 2870 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HttP42859 Slco5a1-202ENSMUST00000115403 8509 ntAPPRIS P2 TSL 5 BASIC5.85□□□□□ -1.47
HttP42859 Gm43488-201ENSMUST00000198874 2504 ntBASIC5.85□□□□□ -1.47
HttP42859 Zfp951-202ENSMUST00000186219 2904 ntAPPRIS P2 TSL 5 BASIC5.85□□□□□ -1.47
HttP42859 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
HttP42859 Fastkd1-201ENSMUST00000073152 2865 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
HttP42859 Gm44829-201ENSMUST00000208008 3193 ntBASIC5.85□□□□□ -1.47
HttP42859 Gm23273-201ENSMUST00000104058 135 ntBASIC5.85□□□□□ -1.47
HttP42859 Gm13808-201ENSMUST00000121353 184 ntBASIC5.85□□□□□ -1.47
HttP42859 C920009B18Rik-203ENSMUST00000181643 1004 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HttP42859 1700019C18Rik-202ENSMUST00000221688 1047 ntTSL 5 BASIC5.85□□□□□ -1.47
HttP42859 AC123061.2-201ENSMUST00000226234 802 ntBASIC5.85□□□□□ -1.47
HttP42859 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC5.85□□□□□ -1.47
HttP42859 Ctage5-223ENSMUST00000219140 4194 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
HttP42859 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
HttP42859 2700099C18Rik-204ENSMUST00000183133 1333 ntBASIC5.85□□□□□ -1.47
HttP42859 Olfr736-204ENSMUST00000215227 2485 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
HttP42859 Adgrl2-217ENSMUST00000200154 5412 ntTSL 5 BASIC5.85□□□□□ -1.47
HttP42859 Olfr115-202ENSMUST00000221552 2295 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
HttP42859 Olfr115-203ENSMUST00000223366 2273 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
HttP42859 Gm7269-201ENSMUST00000210819 1373 ntBASIC5.85□□□□□ -1.47
HttP42859 Olfr12-202ENSMUST00000213247 4158 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
HttP42859 Zfp473-204ENSMUST00000120798 3559 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
HttP42859 Olfr130-202ENSMUST00000215726 5810 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
HttP42859 Catsperg1-212ENSMUST00000169143 3670 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
HttP42859 Pafah1b1-ps1-201ENSMUST00000181263 1046 ntBASIC5.85□□□□□ -1.47
HttP42859 Ighv1-45-201ENSMUST00000193677 352 ntBASIC5.85□□□□□ -1.47
HttP42859 Gm43418-201ENSMUST00000201334 428 ntBASIC5.85□□□□□ -1.47
HttP42859 4930567H12Rik-204ENSMUST00000213085 801 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HttP42859 Gm10845-202ENSMUST00000228217 3389 ntBASIC5.85□□□□□ -1.47
HttP42859 Gm43130-201ENSMUST00000197721 3907 ntBASIC5.85□□□□□ -1.47
HttP42859 Ugt2b37-201ENSMUST00000075858 1894 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HttP42859 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HttP42859 Son-202ENSMUST00000114037 8399 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
HttP42859 AC122305.1-201ENSMUST00000214803 3921 ntBASIC5.84□□□□□ -1.47
HttP42859 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HttP42859 Gm12189-201ENSMUST00000119779 912 ntBASIC5.84□□□□□ -1.47
HttP42859 Mir6960-201ENSMUST00000183449 61 ntBASIC5.84□□□□□ -1.47
HttP42859 1700027H10Rik-201ENSMUST00000186818 584 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HttP42859 Gm37336-202ENSMUST00000193705 468 ntBASIC5.84□□□□□ -1.47
HttP42859 Gm44650-201ENSMUST00000206929 194 ntBASIC5.84□□□□□ -1.47
HttP42859 Gm9512-201ENSMUST00000223112 497 ntBASIC5.84□□□□□ -1.47
HttP42859 AC102603.1-201ENSMUST00000227481 584 ntBASIC5.84□□□□□ -1.47
HttP42859 Mir193a-201ENSMUST00000083461 66 ntBASIC5.84□□□□□ -1.47
HttP42859 Cc2d2a-201ENSMUST00000048150 5484 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HttP42859 Gm43175-201ENSMUST00000198450 3810 ntBASIC5.84□□□□□ -1.47
HttP42859 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC5.84□□□□□ -1.47
HttP42859 Cnot4-201ENSMUST00000044163 3337 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HttP42859 Vmn1r45-204ENSMUST00000227426 3205 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
HttP42859 Med12l-206ENSMUST00000199659 11006 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.47
HttP42859 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC5.84□□□□□ -1.47
HttP42859 Gm23501-201ENSMUST00000157744 256 ntBASIC5.84□□□□□ -1.47
HttP42859 Gm16114-201ENSMUST00000161930 300 ntBASIC5.84□□□□□ -1.47
HttP42859 Ankrd42-207ENSMUST00000207131 1220 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HttP42859 Gm6702-201ENSMUST00000208496 471 ntBASIC5.84□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms