Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gm29124-201ENSMUST00000186576 452 ntBASIC6.04□□□□□ -1.44
Cxcl12P40224 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC6.04□□□□□ -1.44
Cxcl12P40224 4931440P22Rik-205ENSMUST00000194448 474 ntBASIC6.04□□□□□ -1.44
Cxcl12P40224 Igkv2-107-201ENSMUST00000196000 313 ntBASIC6.04□□□□□ -1.44
Cxcl12P40224 Igkv12-47-201ENSMUST00000196961 356 ntBASIC6.04□□□□□ -1.44
Cxcl12P40224 Gm42663-201ENSMUST00000199883 351 ntBASIC6.04□□□□□ -1.44
Cxcl12P40224 Gm4872-201ENSMUST00000205210 1299 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Cxcl12P40224 Gm34096-201ENSMUST00000211296 530 ntTSL 3 BASIC6.04□□□□□ -1.44
Cxcl12P40224 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Cxcl12P40224 AC096628.1-201ENSMUST00000226060 641 ntBASIC6.04□□□□□ -1.44
Cxcl12P40224 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Cxcl12P40224 Prl2a1-201ENSMUST00000023602 884 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cxcl12P40224 Olfr429-201ENSMUST00000060693 943 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Cxcl12P40224 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Cxcl12P40224 Gm34294-201ENSMUST00000191912 4263 ntBASIC6.04□□□□□ -1.44
Cxcl12P40224 CT010514.1-201ENSMUST00000214088 2969 ntBASIC6.04□□□□□ -1.44
Cxcl12P40224 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cxcl12P40224 Fbxw10-205ENSMUST00000176577 3254 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cxcl12P40224 Gm15107-201ENSMUST00000112796 2028 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Cxcl12P40224 Ott-201ENSMUST00000177554 2028 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cxcl12P40224 Ott-202ENSMUST00000177606 2028 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Cxcl12P40224 Gm15085-201ENSMUST00000178169 2028 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cxcl12P40224 Ott-203ENSMUST00000179348 2028 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Cxcl12P40224 Gm20075-201ENSMUST00000220449 2161 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Cxcl12P40224 Gm45177-201ENSMUST00000209104 2307 ntBASIC6.04□□□□□ -1.44
Cxcl12P40224 C230038L03Rik-201ENSMUST00000129409 2632 ntTSL 2 BASIC6.04□□□□□ -1.44
Cxcl12P40224 Pik3c2a-204ENSMUST00000206219 5670 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Cxcl12P40224 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC6.04□□□□□ -1.44
Cxcl12P40224 Grik1-210ENSMUST00000228034 2708 ntBASIC6.04□□□□□ -1.44
Cxcl12P40224 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Cxcl12P40224 Gm43981-201ENSMUST00000203285 1467 ntBASIC6.03□□□□□ -1.44
Cxcl12P40224 Gm26659-201ENSMUST00000181816 3655 ntTSL 5 BASIC6.03□□□□□ -1.44
Cxcl12P40224 Vmn2r124-201ENSMUST00000176802 2568 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Cxcl12P40224 4930539J05Rik-201ENSMUST00000181619 1406 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Cxcl12P40224 Gm14391-202ENSMUST00000109055 965 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Cxcl12P40224 H3f3c-201ENSMUST00000119459 411 ntBASIC6.03□□□□□ -1.44
Cxcl12P40224 Gm11805-201ENSMUST00000121238 600 ntBASIC6.03□□□□□ -1.44
Cxcl12P40224 Gm15428-201ENSMUST00000121352 333 ntBASIC6.03□□□□□ -1.44
Cxcl12P40224 Gm12267-201ENSMUST00000121609 761 ntBASIC6.03□□□□□ -1.44
Cxcl12P40224 Gm6067-201ENSMUST00000121648 491 ntBASIC6.03□□□□□ -1.44
Cxcl12P40224 Gm15892-203ENSMUST00000156149 1001 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Cxcl12P40224 Gm14419-203ENSMUST00000156844 752 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Cxcl12P40224 Vmn1r-ps25-201ENSMUST00000173545 799 ntBASIC6.03□□□□□ -1.44
Cxcl12P40224 Gm37932-201ENSMUST00000192258 1167 ntBASIC6.03□□□□□ -1.44
Cxcl12P40224 Gm43470-201ENSMUST00000196175 454 ntTSL 5 BASIC6.03□□□□□ -1.44
Cxcl12P40224 Gm33952-201ENSMUST00000197795 408 ntBASIC6.03□□□□□ -1.44
Cxcl12P40224 Tbc1d24-213ENSMUST00000201805 3806 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Cxcl12P40224 Cd209a-204ENSMUST00000208960 844 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Cxcl12P40224 Ss18l2-204ENSMUST00000215104 315 ntTSL 5 BASIC6.03□□□□□ -1.44
Cxcl12P40224 AC158803.2-201ENSMUST00000219452 679 ntBASIC6.03□□□□□ -1.44
Cxcl12P40224 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC6.03□□□□□ -1.44
Cxcl12P40224 AC153153.2-201ENSMUST00000223572 411 ntBASIC6.03□□□□□ -1.44
Cxcl12P40224 AC160980.2-201ENSMUST00000225131 949 ntBASIC6.03□□□□□ -1.44
Cxcl12P40224 AC116724.1-201ENSMUST00000227900 972 ntBASIC6.03□□□□□ -1.44
Cxcl12P40224 Zfp457-201ENSMUST00000049705 2117 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Cxcl12P40224 Olfr19-201ENSMUST00000057886 1142 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Cxcl12P40224 Olfr1261-201ENSMUST00000077785 921 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Cxcl12P40224 Olfr1135-201ENSMUST00000099853 933 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Cxcl12P40224 Gm5796-201ENSMUST00000096184 1817 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Cxcl12P40224 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Cxcl12P40224 Gm26742-201ENSMUST00000181829 3340 ntTSL 5 BASIC6.03□□□□□ -1.44
Cxcl12P40224 Mllt10-202ENSMUST00000114669 3865 ntTSL 5 BASIC6.03□□□□□ -1.44
Cxcl12P40224 9330182O14Rik-202ENSMUST00000228780 2053 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Cxcl12P40224 Ptprz1-204ENSMUST00000202102 4947 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Cxcl12P40224 AC105407.2-205ENSMUST00000224680 2733 ntBASIC6.03□□□□□ -1.44
Cxcl12P40224 Gm37531-201ENSMUST00000191628 5415 ntBASIC6.03□□□□□ -1.44
Cxcl12P40224 Vwa5a-202ENSMUST00000118144 3502 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Cxcl12P40224 Gm42681-201ENSMUST00000197999 1611 ntBASIC6.03□□□□□ -1.44
Cxcl12P40224 4930511M06Rik-203ENSMUST00000137603 2651 ntTSL 1 (best) BASIC6.02□□□□□ -1.44
Cxcl12P40224 Enpp2-202ENSMUST00000167541 2664 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.44
Cxcl12P40224 Gm17529-201ENSMUST00000180738 3093 ntTSL 1 (best) BASIC6.02□□□□□ -1.44
Cxcl12P40224 Gm35585-201ENSMUST00000195996 1570 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Cxcl12P40224 Adam25-201ENSMUST00000096663 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Cxcl12P40224 Exoc1-201ENSMUST00000049469 3272 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Cxcl12P40224 Otogl-201ENSMUST00000165341 8763 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Cxcl12P40224 Naip5-201ENSMUST00000049789 5204 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Cxcl12P40224 AC139941.2-201ENSMUST00000221565 1824 ntBASIC6.02□□□□□ -1.45
Cxcl12P40224 Kmt2c-201ENSMUST00000045291 14967 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Cxcl12P40224 Phf6-203ENSMUST00000154864 3057 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Cxcl12P40224 Cyp4a12a-201ENSMUST00000084343 2422 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Cxcl12P40224 Rps15a-201ENSMUST00000106588 640 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.45
Cxcl12P40224 Ghr-202ENSMUST00000110697 1213 ntTSL 5 BASIC6.02□□□□□ -1.45
Cxcl12P40224 Gm11550-201ENSMUST00000118210 699 ntBASIC6.02□□□□□ -1.45
Cxcl12P40224 Gm6175-201ENSMUST00000121351 400 ntBASIC6.02□□□□□ -1.45
Cxcl12P40224 Gm12336-201ENSMUST00000125962 322 ntTSL 3 BASIC6.02□□□□□ -1.45
Cxcl12P40224 Gm16725-201ENSMUST00000138744 1253 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Cxcl12P40224 1700116B05Rik-201ENSMUST00000173461 414 ntTSL 2 BASIC6.02□□□□□ -1.45
Cxcl12P40224 Gm22119-201ENSMUST00000175594 99 ntBASIC6.02□□□□□ -1.45
Cxcl12P40224 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Cxcl12P40224 Gm21842-202ENSMUST00000185311 174 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Cxcl12P40224 Gm29285-201ENSMUST00000185500 174 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Cxcl12P40224 Gm21801-202ENSMUST00000185537 174 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Cxcl12P40224 Gm28312-201ENSMUST00000185976 174 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Cxcl12P40224 Gm29213-201ENSMUST00000186199 174 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Cxcl12P40224 Gm21428-201ENSMUST00000186550 174 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Cxcl12P40224 Gm29370-201ENSMUST00000186581 174 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Cxcl12P40224 Gm28604-201ENSMUST00000186629 484 ntBASIC6.02□□□□□ -1.45
Cxcl12P40224 Gm21633-202ENSMUST00000186630 174 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Cxcl12P40224 Gm28890-201ENSMUST00000186686 173 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Cxcl12P40224 Gm28092-201ENSMUST00000186709 174 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 111.5 ms