Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm7146-201ENSMUST00000116079 739 ntBASIC5.15□□□□□ -1.59
P20040 Gm7931-201ENSMUST00000121537 271 ntBASIC5.15□□□□□ -1.59
P20040 n-R5s19-201ENSMUST00000122793 120 ntBASIC5.15□□□□□ -1.59
P20040 Gm11184-201ENSMUST00000126437 268 ntTSL 3 BASIC5.15□□□□□ -1.59
P20040 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC5.15□□□□□ -1.59
P20040 Gm25013-201ENSMUST00000158402 128 ntBASIC5.15□□□□□ -1.59
P20040 Gm24179-201ENSMUST00000158925 127 ntBASIC5.15□□□□□ -1.59
P20040 BC050972-202ENSMUST00000169153 467 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
P20040 Gm17198-201ENSMUST00000171792 1154 ntBASIC5.15□□□□□ -1.59
P20040 Pkib-211ENSMUST00000177473 525 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
P20040 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC5.15□□□□□ -1.59
P20040 Gm27210-201ENSMUST00000184263 402 ntBASIC5.15□□□□□ -1.59
P20040 Gm21139-201ENSMUST00000186594 877 ntBASIC5.15□□□□□ -1.59
P20040 Gm28179-202ENSMUST00000189029 327 ntTSL 5 BASIC5.15□□□□□ -1.59
P20040 Gm28532-201ENSMUST00000190408 572 ntTSL 5 BASIC5.15□□□□□ -1.59
P20040 Gm43655-201ENSMUST00000197367 222 ntBASIC5.15□□□□□ -1.59
P20040 Tsg101-ps-201ENSMUST00000201023 1170 ntBASIC5.15□□□□□ -1.59
P20040 Gm36840-201ENSMUST00000202688 250 ntTSL 3 BASIC5.15□□□□□ -1.59
P20040 Olfr163-ps1-201ENSMUST00000205891 940 ntBASIC5.15□□□□□ -1.59
P20040 Gm29791-201ENSMUST00000207144 380 ntTSL 3 BASIC5.15□□□□□ -1.59
P20040 Gm45724-201ENSMUST00000213031 420 ntBASIC5.15□□□□□ -1.59
P20040 AC091522.1-201ENSMUST00000213934 850 ntTSL 5 BASIC5.15□□□□□ -1.59
P20040 Olfr1240-201ENSMUST00000215362 1074 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
P20040 AC129323.1-201ENSMUST00000216733 470 ntBASIC5.15□□□□□ -1.59
P20040 Gm40787-201ENSMUST00000218056 317 ntTSL 3 BASIC5.15□□□□□ -1.59
P20040 Gm9088-201ENSMUST00000220237 508 ntBASIC5.15□□□□□ -1.59
P20040 CT009515.3-201ENSMUST00000226509 671 ntBASIC5.15□□□□□ -1.59
P20040 Gm22126-201ENSMUST00000083244 142 ntBASIC5.15□□□□□ -1.59
P20040 Snora30-201ENSMUST00000083325 130 ntBASIC5.15□□□□□ -1.59
P20040 Asah2-201ENSMUST00000096119 4682 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
P20040 Gm15023-201ENSMUST00000113183 3698 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
P20040 Gm11516-201ENSMUST00000118450 1582 ntBASIC5.15□□□□□ -1.59
P20040 AV320801-201ENSMUST00000068340 3698 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
P20040 4930554C24Rik-203ENSMUST00000216802 1346 ntTSL 5 BASIC5.15□□□□□ -1.59
P20040 Dhrs9-201ENSMUST00000063690 4281 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
P20040 Olfr984-204ENSMUST00000217536 5114 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
P20040 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
P20040 Vmn1r71-201ENSMUST00000079113 4996 ntAPPRIS P2 BASIC5.15□□□□□ -1.59
P20040 Vmn2r14-201ENSMUST00000170341 2547 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
P20040 AC124579.1-201ENSMUST00000223468 2520 ntBASIC5.15□□□□□ -1.59
P20040 Gm18878-201ENSMUST00000223071 1443 ntBASIC5.14□□□□□ -1.59
P20040 Gm14496-201ENSMUST00000071760 2550 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
P20040 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
P20040 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
P20040 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC5.14□□□□□ -1.59
P20040 3110067C02Rik-201ENSMUST00000120793 2117 ntBASIC5.14□□□□□ -1.59
P20040 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
P20040 Gnal-202ENSMUST00000076605 5223 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
P20040 Olfr670-202ENSMUST00000214216 3729 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
P20040 Ccar1-201ENSMUST00000020268 4352 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
P20040 AC158982.1-205ENSMUST00000227339 1876 ntBASIC5.14□□□□□ -1.59
P20040 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
P20040 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
P20040 Gm40987-202ENSMUST00000221856 1588 ntTSL 5 BASIC5.14□□□□□ -1.59
P20040 Gabrg2-202ENSMUST00000070735 2234 ntAPPRIS P4 TSL 1 (best) BASIC5.14□□□□□ -1.59
P20040 Gm13679-201ENSMUST00000118678 484 ntBASIC5.14□□□□□ -1.59
P20040 Gm12308-201ENSMUST00000120440 389 ntBASIC5.14□□□□□ -1.59
P20040 Gm24383-201ENSMUST00000122691 333 ntBASIC5.14□□□□□ -1.59
P20040 Gm4660-201ENSMUST00000131499 403 ntBASIC5.14□□□□□ -1.59
P20040 Gm22655-201ENSMUST00000174949 96 ntBASIC5.14□□□□□ -1.59
P20040 Gm23162-201ENSMUST00000175081 121 ntBASIC5.14□□□□□ -1.59
P20040 AF067063-201ENSMUST00000179455 590 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
P20040 Gm7713-201ENSMUST00000181201 1007 ntBASIC5.14□□□□□ -1.59
P20040 Mir6361-201ENSMUST00000185079 101 ntBASIC5.14□□□□□ -1.59
P20040 Olfr1252-201ENSMUST00000186710 1099 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
P20040 Gm29289-201ENSMUST00000188358 576 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
P20040 Gm28269-201ENSMUST00000189511 559 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
P20040 Gm29551-201ENSMUST00000190913 698 ntBASIC5.14□□□□□ -1.59
P20040 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC5.14□□□□□ -1.59
P20040 Gm38343-201ENSMUST00000195786 1060 ntTSL 5 BASIC5.14□□□□□ -1.59
P20040 4930512P04Rik-201ENSMUST00000197000 424 ntBASIC5.14□□□□□ -1.59
P20040 Gm35013-201ENSMUST00000197218 832 ntBASIC5.14□□□□□ -1.59
P20040 Gm43688-201ENSMUST00000202249 310 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
P20040 Gm43105-201ENSMUST00000202987 459 ntBASIC5.14□□□□□ -1.59
P20040 Gm18009-201ENSMUST00000203239 1016 ntBASIC5.14□□□□□ -1.59
P20040 Gm45241-201ENSMUST00000211237 634 ntTSL 5 BASIC5.14□□□□□ -1.59
P20040 Noxred1-201ENSMUST00000021423 1101 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
P20040 Gm5831-201ENSMUST00000216016 1209 ntBASIC5.14□□□□□ -1.59
P20040 Olfr1084-201ENSMUST00000216851 961 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
P20040 4921501I09Rik-201ENSMUST00000220337 384 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
P20040 Lrrc72-203ENSMUST00000221155 1141 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
P20040 AC159208.1-201ENSMUST00000221403 649 ntBASIC5.14□□□□□ -1.59
P20040 Vmn1r22-205ENSMUST00000228322 909 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
P20040 AC120375.2-202ENSMUST00000228722 397 ntBASIC5.14□□□□□ -1.59
P20040 Cst12-201ENSMUST00000028932 644 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
P20040 2310030G06Rik-201ENSMUST00000034564 1257 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
P20040 Zfp993-201ENSMUST00000070932 387 ntAPPRIS ALT2 TSL 3 BASIC5.14□□□□□ -1.59
P20040 Gm26226-201ENSMUST00000082509 116 ntBASIC5.14□□□□□ -1.59
P20040 Gm24041-201ENSMUST00000083115 156 ntBASIC5.14□□□□□ -1.59
P20040 Vmn1r183-201ENSMUST00000086012 918 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
P20040 Olfr1275-201ENSMUST00000099620 1020 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
P20040 Olfr1321-202ENSMUST00000215373 4482 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
P20040 Pramef8-202ENSMUST00000059790 3886 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
P20040 Gm37456-201ENSMUST00000193176 5837 ntBASIC5.14□□□□□ -1.59
P20040 Dazl-201ENSMUST00000010736 2942 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
P20040 Olfr1382-203ENSMUST00000213707 4294 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
P20040 Olfr1382-204ENSMUST00000213899 4285 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
P20040 Olfr1382-205ENSMUST00000217564 4287 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
P20040 Gm8853-201ENSMUST00000198366 1344 ntBASIC5.14□□□□□ -1.59
P20040 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms