Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 4930591A17Rik-201ENSMUST00000041998 737 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Chmp6P0C0A3 Gm7808-201ENSMUST00000082002 387 ntBASIC6.29□□□□□ -1.4
Chmp6P0C0A3 Gm23502-201ENSMUST00000083902 145 ntBASIC6.29□□□□□ -1.4
Chmp6P0C0A3 BC061195-201ENSMUST00000088133 577 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Chmp6P0C0A3 1700003E24Rik-201ENSMUST00000088134 577 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Chmp6P0C0A3 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Chmp6P0C0A3 Il1rapl2-201ENSMUST00000075471 2061 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Chmp6P0C0A3 Gm38081-201ENSMUST00000192680 1645 ntBASIC6.28□□□□□ -1.4
Chmp6P0C0A3 Map9-201ENSMUST00000091014 6218 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Chmp6P0C0A3 Zfp317-202ENSMUST00000208694 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Chmp6P0C0A3 Gm45413-201ENSMUST00000210389 3538 ntBASIC6.28□□□□□ -1.4
Chmp6P0C0A3 Ncoa7-212ENSMUST00000217644 2256 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Chmp6P0C0A3 Gm37137-201ENSMUST00000195138 2684 ntBASIC6.28□□□□□ -1.4
Chmp6P0C0A3 Gm26789-201ENSMUST00000181342 2502 ntTSL 5 BASIC6.28□□□□□ -1.4
Chmp6P0C0A3 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
Chmp6P0C0A3 Ddx4-201ENSMUST00000075748 2762 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
Chmp6P0C0A3 Gm37717-201ENSMUST00000192647 3027 ntBASIC6.28□□□□□ -1.4
Chmp6P0C0A3 Mup6-202ENSMUST00000107520 540 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Chmp6P0C0A3 Gm9112-201ENSMUST00000113610 420 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
Chmp6P0C0A3 Gm5751-201ENSMUST00000115561 444 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Chmp6P0C0A3 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC6.28□□□□□ -1.4
Chmp6P0C0A3 Gm6744-201ENSMUST00000119303 543 ntBASIC6.28□□□□□ -1.4
Chmp6P0C0A3 Gm11848-201ENSMUST00000121207 973 ntBASIC6.28□□□□□ -1.4
Chmp6P0C0A3 Gm12494-201ENSMUST00000121684 521 ntBASIC6.28□□□□□ -1.4
Chmp6P0C0A3 Gm12293-201ENSMUST00000121898 590 ntBASIC6.28□□□□□ -1.4
Chmp6P0C0A3 Gm23149-201ENSMUST00000158837 230 ntBASIC6.28□□□□□ -1.4
Chmp6P0C0A3 Mir7072-201ENSMUST00000184542 60 ntBASIC6.28□□□□□ -1.4
Chmp6P0C0A3 Gm29489-201ENSMUST00000188934 324 ntBASIC6.28□□□□□ -1.4
Chmp6P0C0A3 Gm43222-201ENSMUST00000199013 603 ntBASIC6.28□□□□□ -1.4
Chmp6P0C0A3 Gm42640-201ENSMUST00000199792 1195 ntBASIC6.28□□□□□ -1.4
Chmp6P0C0A3 Olfr1295-201ENSMUST00000207283 1282 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
Chmp6P0C0A3 Gm19900-201ENSMUST00000207285 576 ntBASIC6.28□□□□□ -1.4
Chmp6P0C0A3 AC153845.2-203ENSMUST00000215889 617 ntTSL 3 BASIC6.28□□□□□ -1.4
Chmp6P0C0A3 AC154765.1-201ENSMUST00000217732 439 ntTSL 3 BASIC6.28□□□□□ -1.4
Chmp6P0C0A3 1700019C18Rik-202ENSMUST00000221688 1047 ntTSL 5 BASIC6.28□□□□□ -1.4
Chmp6P0C0A3 AC118250.1-201ENSMUST00000228569 875 ntBASIC6.28□□□□□ -1.4
Chmp6P0C0A3 Gm23737-201ENSMUST00000082547 159 ntBASIC6.28□□□□□ -1.4
Chmp6P0C0A3 n-R5-8s1-201ENSMUST00000083988 148 ntBASIC6.28□□□□□ -1.4
Chmp6P0C0A3 Boll-201ENSMUST00000087585 882 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Chmp6P0C0A3 Gm15182-201ENSMUST00000120832 1676 ntBASIC6.28□□□□□ -1.4
Chmp6P0C0A3 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Chmp6P0C0A3 Gm2223-201ENSMUST00000112099 1350 ntBASIC6.28□□□□□ -1.4
Chmp6P0C0A3 Olfr417-203ENSMUST00000220394 6080 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Chmp6P0C0A3 Tmprss11a-201ENSMUST00000101073 2657 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Chmp6P0C0A3 Gm4070-202ENSMUST00000176467 9007 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Chmp6P0C0A3 Gvin1-202ENSMUST00000183409 9005 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Chmp6P0C0A3 Gm43523-201ENSMUST00000197397 2878 ntBASIC6.28□□□□□ -1.4
Chmp6P0C0A3 D5Ertd577e-201ENSMUST00000094593 2462 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.4
Chmp6P0C0A3 Gm43437-201ENSMUST00000198535 3955 ntBASIC6.27□□□□□ -1.41
Chmp6P0C0A3 Gnal-202ENSMUST00000076605 5223 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Chmp6P0C0A3 Gm14326-202ENSMUST00000108930 1807 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
Chmp6P0C0A3 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Chmp6P0C0A3 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Chmp6P0C0A3 Gm42827-201ENSMUST00000197058 1515 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Chmp6P0C0A3 Tmigd3-201ENSMUST00000010279 900 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Chmp6P0C0A3 Atp5l2-ps-201ENSMUST00000120130 312 ntBASIC6.27□□□□□ -1.41
Chmp6P0C0A3 4933401B06Rik-201ENSMUST00000139758 1155 ntBASIC6.27□□□□□ -1.41
Chmp6P0C0A3 Sox5os3-202ENSMUST00000154167 765 ntTSL 3 BASIC6.27□□□□□ -1.41
Chmp6P0C0A3 Tmem258-204ENSMUST00000166412 447 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Chmp6P0C0A3 Gm8220-202ENSMUST00000169601 525 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Chmp6P0C0A3 Gm2539-203ENSMUST00000181352 746 ntBASIC6.27□□□□□ -1.41
Chmp6P0C0A3 Igkv19-93-201ENSMUST00000183936 344 ntAPPRIS ALT2 BASIC6.27□□□□□ -1.41
Chmp6P0C0A3 Gm27208-201ENSMUST00000184323 604 ntTSL 3 BASIC6.27□□□□□ -1.41
Chmp6P0C0A3 6430511E19Rik-201ENSMUST00000192772 3835 ntBASIC6.27□□□□□ -1.41
Chmp6P0C0A3 Gm37966-201ENSMUST00000193122 326 ntBASIC6.27□□□□□ -1.41
Chmp6P0C0A3 4931440P22Rik-205ENSMUST00000194448 474 ntBASIC6.27□□□□□ -1.41
Chmp6P0C0A3 Asb17os-202ENSMUST00000200329 497 ntTSL 3 BASIC6.27□□□□□ -1.41
Chmp6P0C0A3 Gm42961-201ENSMUST00000202023 181 ntBASIC6.27□□□□□ -1.41
Chmp6P0C0A3 Tas2r111-ps2-201ENSMUST00000203794 901 ntBASIC6.27□□□□□ -1.41
Chmp6P0C0A3 Gm18689-201ENSMUST00000203969 902 ntBASIC6.27□□□□□ -1.41
Chmp6P0C0A3 Gm7890-201ENSMUST00000204877 601 ntBASIC6.27□□□□□ -1.41
Chmp6P0C0A3 Gm44768-201ENSMUST00000205719 393 ntBASIC6.27□□□□□ -1.41
Chmp6P0C0A3 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC6.27□□□□□ -1.41
Chmp6P0C0A3 Gm44992-214ENSMUST00000210787 1079 ntTSL 5 BASIC6.27□□□□□ -1.41
Chmp6P0C0A3 AC156801.1-201ENSMUST00000216158 493 ntTSL 5 BASIC6.27□□□□□ -1.41
Chmp6P0C0A3 AC156832.1-201ENSMUST00000217609 811 ntTSL 5 BASIC6.27□□□□□ -1.41
Chmp6P0C0A3 Morn2-201ENSMUST00000061703 644 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Chmp6P0C0A3 Gm10221-201ENSMUST00000088299 309 ntBASIC6.27□□□□□ -1.41
Chmp6P0C0A3 Olfr1217-201ENSMUST00000099799 1105 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Chmp6P0C0A3 Olfr994-201ENSMUST00000099925 945 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Chmp6P0C0A3 AC110043.1-201ENSMUST00000220278 1627 ntBASIC6.27□□□□□ -1.41
Chmp6P0C0A3 Vmn2r79-201ENSMUST00000164462 2556 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Chmp6P0C0A3 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Chmp6P0C0A3 Klrb1f-201ENSMUST00000032257 1701 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Chmp6P0C0A3 Gm21093-201ENSMUST00000084677 1710 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Chmp6P0C0A3 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Chmp6P0C0A3 Naalad2-207ENSMUST00000172171 4066 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Chmp6P0C0A3 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Chmp6P0C0A3 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Chmp6P0C0A3 Slc10a5-201ENSMUST00000078748 3923 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Chmp6P0C0A3 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
Chmp6P0C0A3 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC6.27□□□□□ -1.41
Chmp6P0C0A3 Olfr55-203ENSMUST00000214891 4428 ntTSL 5 BASIC6.26□□□□□ -1.41
Chmp6P0C0A3 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Chmp6P0C0A3 Gm14496-201ENSMUST00000071760 2550 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Chmp6P0C0A3 Gm15713-201ENSMUST00000155900 1546 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Chmp6P0C0A3 Vmn2r14-201ENSMUST00000170341 2547 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Chmp6P0C0A3 Igkv5-37-201ENSMUST00000103372 359 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Chmp6P0C0A3 Gm22372-201ENSMUST00000104589 136 ntBASIC6.26□□□□□ -1.41
Chmp6P0C0A3 Gm8279-201ENSMUST00000112767 998 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms