Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Wfdc10-201ENSMUST00000094344 459 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Hoxd3P09027 Grxcr1-201ENSMUST00000094715 1071 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Hoxd3P09027 Olfr599-201ENSMUST00000098201 1050 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Hoxd3P09027 Rnf141-209ENSMUST00000177236 4032 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Hoxd3P09027 Serpina3a-203ENSMUST00000185595 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Hoxd3P09027 Ppp1r9a-204ENSMUST00000168998 2966 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Hoxd3P09027 Ttc41-203ENSMUST00000217747 1949 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Hoxd3P09027 Gm3203-201ENSMUST00000197670 2389 ntBASIC6.01□□□□□ -1.45
Hoxd3P09027 Olfr544-201ENSMUST00000051201 3270 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
Hoxd3P09027 Ccdc127-201ENSMUST00000022063 9559 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Hoxd3P09027 Exoc1-202ENSMUST00000087133 3371 ntAPPRIS P4 TSL 1 (best) BASIC6.01□□□□□ -1.45
Hoxd3P09027 Bbs9-210ENSMUST00000147712 3495 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Hoxd3P09027 2610203C22Rik-204ENSMUST00000148585 3475 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Hoxd3P09027 Zfp37-201ENSMUST00000068822 3494 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Hoxd3P09027 A130050O07Rik-201ENSMUST00000191963 3023 ntBASIC6.01□□□□□ -1.45
Hoxd3P09027 Zfp474-202ENSMUST00000209270 2113 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Hoxd3P09027 Tex21-201ENSMUST00000021453 2137 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Hoxd3P09027 Psma8-201ENSMUST00000040860 1693 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Hoxd3P09027 Copg1-202ENSMUST00000113607 4140 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Hoxd3P09027 C79798-201ENSMUST00000131588 1793 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Hoxd3P09027 Gm8297-202ENSMUST00000171964 1759 ntAPPRIS P5 TSL 5 BASIC6.01□□□□□ -1.45
Hoxd3P09027 R3hdm2-204ENSMUST00000105250 3975 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
Hoxd3P09027 Mapk1ip1l-202ENSMUST00000166743 4542 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Hoxd3P09027 Lrrc37a-201ENSMUST00000153273 9647 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Hoxd3P09027 Usp15-201ENSMUST00000020334 4666 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
Hoxd3P09027 Sec16b-202ENSMUST00000086130 4661 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Hoxd3P09027 CT025642.2-201ENSMUST00000225009 1649 ntBASIC6□□□□□ -1.45
Hoxd3P09027 Cs-201ENSMUST00000005826 2926 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Hoxd3P09027 Usp37-201ENSMUST00000044260 7111 ntTSL 5 BASIC6□□□□□ -1.45
Hoxd3P09027 Syt14-203ENSMUST00000195354 7882 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
Hoxd3P09027 Strbp-202ENSMUST00000072186 3144 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Hoxd3P09027 Gulp1-201ENSMUST00000074525 3138 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Hoxd3P09027 Gm7337-202ENSMUST00000181439 2655 ntBASIC6□□□□□ -1.45
Hoxd3P09027 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC6□□□□□ -1.45
Hoxd3P09027 Vezt-201ENSMUST00000047711 4479 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
Hoxd3P09027 Gucy1a3-201ENSMUST00000048976 4554 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Hoxd3P09027 n-R5s1-201ENSMUST00000101925 119 ntBASIC6□□□□□ -1.45
Hoxd3P09027 Igkv8-27-201ENSMUST00000103381 300 ntAPPRIS P1 BASIC6□□□□□ -1.45
Hoxd3P09027 Ighv1-84-201ENSMUST00000103551 351 ntAPPRIS P1 BASIC6□□□□□ -1.45
Hoxd3P09027 Gm23834-201ENSMUST00000104436 129 ntBASIC6□□□□□ -1.45
Hoxd3P09027 Cisd3-202ENSMUST00000107584 546 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Hoxd3P09027 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Hoxd3P09027 Gm5752-201ENSMUST00000117771 594 ntBASIC6□□□□□ -1.45
Hoxd3P09027 Gm14901-201ENSMUST00000119001 283 ntBASIC6□□□□□ -1.45
Hoxd3P09027 Platr14-205ENSMUST00000146553 770 ntTSL 2 BASIC6□□□□□ -1.45
Hoxd3P09027 Gm11816-202ENSMUST00000149848 714 ntTSL 2 BASIC6□□□□□ -1.45
Hoxd3P09027 Gm16015-201ENSMUST00000154897 390 ntTSL 1 (best) BASIC6□□□□□ -1.45
Hoxd3P09027 Fbxl12-210ENSMUST00000155301 476 ntTSL 3 BASIC6□□□□□ -1.45
Hoxd3P09027 Gm22261-201ENSMUST00000158691 324 ntBASIC6□□□□□ -1.45
Hoxd3P09027 Oas1h-202ENSMUST00000171820 931 ntTSL 5 BASIC6□□□□□ -1.45
Hoxd3P09027 Gm20396-201ENSMUST00000173358 745 ntBASIC6□□□□□ -1.45
Hoxd3P09027 Mthfr-ps1-201ENSMUST00000174153 601 ntBASIC6□□□□□ -1.45
Hoxd3P09027 1700010K23Rik-201ENSMUST00000174502 376 ntTSL 1 (best) BASIC6□□□□□ -1.45
Hoxd3P09027 Gm24810-201ENSMUST00000175317 70 ntBASIC6□□□□□ -1.45
Hoxd3P09027 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC6□□□□□ -1.45
Hoxd3P09027 Gm26866-201ENSMUST00000180414 802 ntBASIC6□□□□□ -1.45
Hoxd3P09027 Gm27019-201ENSMUST00000183056 404 ntBASIC6□□□□□ -1.45
Hoxd3P09027 1700064J06Rik-201ENSMUST00000187551 386 ntTSL 1 (best) BASIC6□□□□□ -1.45
Hoxd3P09027 Gm17916-202ENSMUST00000187634 1187 ntBASIC6□□□□□ -1.45
Hoxd3P09027 Cd68-201ENSMUST00000018918 1230 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
Hoxd3P09027 1700102P08Rik-202ENSMUST00000192995 658 ntTSL 3 BASIC6□□□□□ -1.45
Hoxd3P09027 Gm37729-201ENSMUST00000194761 1172 ntBASIC6□□□□□ -1.45
Hoxd3P09027 Ighv12-1-201ENSMUST00000195542 329 ntBASIC6□□□□□ -1.45
Hoxd3P09027 Gm43494-201ENSMUST00000197672 388 ntBASIC6□□□□□ -1.45
Hoxd3P09027 Gm5983-201ENSMUST00000197739 770 ntBASIC6□□□□□ -1.45
Hoxd3P09027 A730082K24Rik-202ENSMUST00000205795 658 ntTSL 3 BASIC6□□□□□ -1.45
Hoxd3P09027 Gm45700-201ENSMUST00000205866 347 ntBASIC6□□□□□ -1.45
Hoxd3P09027 E230032D23Rik-202ENSMUST00000207959 451 ntTSL 1 (best) BASIC6□□□□□ -1.45
Hoxd3P09027 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC6□□□□□ -1.45
Hoxd3P09027 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC6□□□□□ -1.45
Hoxd3P09027 Gm20304-201ENSMUST00000218168 444 ntBASIC6□□□□□ -1.45
Hoxd3P09027 AL513022.1-201ENSMUST00000220489 504 ntTSL 5 BASIC6□□□□□ -1.45
Hoxd3P09027 AC162183.1-201ENSMUST00000224843 472 ntBASIC6□□□□□ -1.45
Hoxd3P09027 Ifitm5-201ENSMUST00000026562 765 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Hoxd3P09027 Plp1-201ENSMUST00000033800 4699 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Hoxd3P09027 Ndufa7-201ENSMUST00000048249 508 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Hoxd3P09027 Ly6c1-201ENSMUST00000065408 844 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
Hoxd3P09027 Olfr919-201ENSMUST00000071425 948 ntAPPRIS P2 BASIC6□□□□□ -1.45
Hoxd3P09027 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Hoxd3P09027 Rpl31-ps20-201ENSMUST00000080982 378 ntBASIC6□□□□□ -1.45
Hoxd3P09027 Mir135b-201ENSMUST00000083501 97 ntBASIC6□□□□□ -1.45
Hoxd3P09027 Gm26176-201ENSMUST00000083795 105 ntBASIC6□□□□□ -1.45
Hoxd3P09027 Olfr575-201ENSMUST00000084812 957 ntBASIC6□□□□□ -1.45
Hoxd3P09027 Rsf1os2-202ENSMUST00000147690 3091 ntTSL 1 (best) BASIC6□□□□□ -1.45
Hoxd3P09027 Mpdz-203ENSMUST00000107262 7518 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
Hoxd3P09027 1700012E03Rik-201ENSMUST00000186237 1377 ntTSL 1 (best) BASIC6□□□□□ -1.45
Hoxd3P09027 Gpr35-201ENSMUST00000027489 3270 ntTSL 1 (best) BASIC6□□□□□ -1.45
Hoxd3P09027 Gm11590-201ENSMUST00000118999 1455 ntBASIC6□□□□□ -1.45
Hoxd3P09027 Senp6-203ENSMUST00000165607 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Hoxd3P09027 Gm44889-203ENSMUST00000208346 1589 ntTSL 5 BASIC6□□□□□ -1.45
Hoxd3P09027 Tnni3k-201ENSMUST00000064076 3034 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Hoxd3P09027 BC049715-203ENSMUST00000203499 2057 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Hoxd3P09027 Nudt7-202ENSMUST00000073521 3543 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
Hoxd3P09027 Musk-207ENSMUST00000177951 3352 ntTSL 5 BASIC6□□□□□ -1.45
Hoxd3P09027 Musk-204ENSMUST00000098059 3352 ntTSL 5 BASIC6□□□□□ -1.45
Hoxd3P09027 Rian-209ENSMUST00000182406 3476 ntBASIC6□□□□□ -1.45
Hoxd3P09027 Olfr523-202ENSMUST00000209314 3677 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
Hoxd3P09027 Fto-204ENSMUST00000136802 3751 ntTSL 1 (best) BASIC6□□□□□ -1.45
Hoxd3P09027 Oat-rs1-201ENSMUST00000122186 1311 ntBASIC5.99□□□□□ -1.45
Hoxd3P09027 Gm7646-201ENSMUST00000198590 1346 ntBASIC5.99□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms