Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Gm15848-203ENSMUST00000136015 482 ntTSL 5 BASIC6.12□□□□□ -1.43
TnfP06804 Gm8980-201ENSMUST00000140232 2197 ntBASIC6.12□□□□□ -1.43
TnfP06804 Crem-236ENSMUST00000154715 1167 ntTSL 5 BASIC6.12□□□□□ -1.43
TnfP06804 Gm8185-201ENSMUST00000160999 669 ntBASIC6.12□□□□□ -1.43
TnfP06804 Gm20453-201ENSMUST00000173968 226 ntBASIC6.12□□□□□ -1.43
TnfP06804 Vmn2r-ps3-201ENSMUST00000176077 1101 ntBASIC6.12□□□□□ -1.43
TnfP06804 Obox3-ps5-201ENSMUST00000176412 1003 ntBASIC6.12□□□□□ -1.43
TnfP06804 Gm28943-201ENSMUST00000186187 615 ntBASIC6.12□□□□□ -1.43
TnfP06804 Gm28736-201ENSMUST00000186257 615 ntBASIC6.12□□□□□ -1.43
TnfP06804 Gm29401-201ENSMUST00000186690 615 ntBASIC6.12□□□□□ -1.43
TnfP06804 Gm29178-204ENSMUST00000186784 615 ntBASIC6.12□□□□□ -1.43
TnfP06804 Gm28589-201ENSMUST00000186991 615 ntBASIC6.12□□□□□ -1.43
TnfP06804 Gm28936-201ENSMUST00000187153 615 ntBASIC6.12□□□□□ -1.43
TnfP06804 Gm29121-201ENSMUST00000187611 615 ntBASIC6.12□□□□□ -1.43
TnfP06804 Gm28243-201ENSMUST00000187801 615 ntBASIC6.12□□□□□ -1.43
TnfP06804 Gm28844-202ENSMUST00000187977 615 ntBASIC6.12□□□□□ -1.43
TnfP06804 Gm29058-201ENSMUST00000189510 615 ntBASIC6.12□□□□□ -1.43
TnfP06804 Gm29624-201ENSMUST00000190018 615 ntBASIC6.12□□□□□ -1.43
TnfP06804 Gm28780-201ENSMUST00000190223 615 ntBASIC6.12□□□□□ -1.43
TnfP06804 Gm28188-201ENSMUST00000190483 236 ntBASIC6.12□□□□□ -1.43
TnfP06804 Gm28969-211ENSMUST00000190992 615 ntBASIC6.12□□□□□ -1.43
TnfP06804 Gm28990-207ENSMUST00000191219 615 ntBASIC6.12□□□□□ -1.43
TnfP06804 Gm36468-201ENSMUST00000192119 615 ntBASIC6.12□□□□□ -1.43
TnfP06804 5033404E19Rik-201ENSMUST00000192616 630 ntBASIC6.12□□□□□ -1.43
TnfP06804 Gm31572-201ENSMUST00000193341 615 ntBASIC6.12□□□□□ -1.43
TnfP06804 Gm30175-201ENSMUST00000194173 615 ntBASIC6.12□□□□□ -1.43
TnfP06804 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC6.12□□□□□ -1.43
TnfP06804 Gm30858-201ENSMUST00000195516 615 ntBASIC6.12□□□□□ -1.43
TnfP06804 Gm31306-201ENSMUST00000197517 508 ntBASIC6.12□□□□□ -1.43
TnfP06804 Gm21461-201ENSMUST00000200382 863 ntBASIC6.12□□□□□ -1.43
TnfP06804 Gm31166-201ENSMUST00000209326 288 ntBASIC6.12□□□□□ -1.43
TnfP06804 Rab7-ps1-201ENSMUST00000213253 622 ntBASIC6.12□□□□□ -1.43
TnfP06804 Gm10310-202ENSMUST00000213667 4661 ntAPPRIS P5 TSL 5 BASIC6.12□□□□□ -1.43
TnfP06804 Gm29521-203ENSMUST00000216148 805 ntTSL 5 BASIC6.12□□□□□ -1.43
TnfP06804 AC119892.1-201ENSMUST00000217997 384 ntTSL 3 BASIC6.12□□□□□ -1.43
TnfP06804 Nqo2-201ENSMUST00000021843 1063 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
TnfP06804 AC124420.1-201ENSMUST00000219779 791 ntBASIC6.12□□□□□ -1.43
TnfP06804 AC154636.1-201ENSMUST00000223226 126 ntBASIC6.12□□□□□ -1.43
TnfP06804 AC192333.6-201ENSMUST00000224565 725 ntBASIC6.12□□□□□ -1.43
TnfP06804 Aass-201ENSMUST00000031707 3701 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
TnfP06804 Pik3c2g-202ENSMUST00000087657 3303 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
TnfP06804 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
TnfP06804 Olfr74-201ENSMUST00000099840 957 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
TnfP06804 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC6.12□□□□□ -1.43
TnfP06804 Cntnap5a-201ENSMUST00000043725 10945 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
TnfP06804 Tmem74-201ENSMUST00000067469 3528 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
TnfP06804 Olfr221-205ENSMUST00000216907 2859 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
TnfP06804 Lpar6-201ENSMUST00000044405 5400 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
TnfP06804 Serpinb5-203ENSMUST00000112730 2672 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
TnfP06804 Vmn2r-ps54-205ENSMUST00000182110 2587 ntBASIC6.12□□□□□ -1.43
TnfP06804 Il1a-201ENSMUST00000028882 1974 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TnfP06804 4933411E08Rik-201ENSMUST00000217950 1689 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
TnfP06804 Gm43842-201ENSMUST00000202890 2982 ntBASIC6.11□□□□□ -1.43
TnfP06804 A530053G22Rik-205ENSMUST00000205153 1448 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
TnfP06804 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
TnfP06804 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
TnfP06804 Gm5868-201ENSMUST00000031124 1382 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TnfP06804 Tmc1-201ENSMUST00000039500 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TnfP06804 1700093K21Rik-204ENSMUST00000169264 1320 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
TnfP06804 Vmn2r60-201ENSMUST00000166447 2562 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
TnfP06804 Gm8424-201ENSMUST00000117716 988 ntBASIC6.11□□□□□ -1.43
TnfP06804 Gm12901-201ENSMUST00000118690 532 ntBASIC6.11□□□□□ -1.43
TnfP06804 Olfr363-ps-201ENSMUST00000119049 254 ntBASIC6.11□□□□□ -1.43
TnfP06804 Gm14521-201ENSMUST00000119545 350 ntBASIC6.11□□□□□ -1.43
TnfP06804 Gm13489-201ENSMUST00000121234 971 ntBASIC6.11□□□□□ -1.43
TnfP06804 Gm6175-201ENSMUST00000121351 400 ntBASIC6.11□□□□□ -1.43
TnfP06804 Gm15840-201ENSMUST00000122099 943 ntBASIC6.11□□□□□ -1.43
TnfP06804 0610043K17Rik-201ENSMUST00000123107 614 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
TnfP06804 Gm15818-201ENSMUST00000134692 656 ntTSL 3 BASIC6.11□□□□□ -1.43
TnfP06804 Gm12147-201ENSMUST00000144024 182 ntTSL 3 BASIC6.11□□□□□ -1.43
TnfP06804 Gm23774-201ENSMUST00000158990 131 ntBASIC6.11□□□□□ -1.43
TnfP06804 Gm15809-201ENSMUST00000159361 661 ntTSL 5 BASIC6.11□□□□□ -1.43
TnfP06804 Gm3008-201ENSMUST00000160566 571 ntBASIC6.11□□□□□ -1.43
TnfP06804 Gm8032-201ENSMUST00000171009 574 ntBASIC6.11□□□□□ -1.43
TnfP06804 Vmn1r-ps60-201ENSMUST00000173467 852 ntBASIC6.11□□□□□ -1.43
TnfP06804 1700108J01Rik-201ENSMUST00000187423 484 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
TnfP06804 Gm5334-201ENSMUST00000187472 720 ntBASIC6.11□□□□□ -1.43
TnfP06804 Gm28238-201ENSMUST00000188102 383 ntTSL 5 BASIC6.11□□□□□ -1.43
TnfP06804 Gm2429-201ENSMUST00000194635 586 ntBASIC6.11□□□□□ -1.43
TnfP06804 Gm42522-201ENSMUST00000196071 255 ntBASIC6.11□□□□□ -1.43
TnfP06804 Gm43608-201ENSMUST00000197703 687 ntTSL 3 BASIC6.11□□□□□ -1.43
TnfP06804 Gm4874-201ENSMUST00000203589 691 ntBASIC6.11□□□□□ -1.43
TnfP06804 Gm8039-201ENSMUST00000204758 712 ntBASIC6.11□□□□□ -1.43
TnfP06804 Gm7990-201ENSMUST00000212126 593 ntBASIC6.11□□□□□ -1.43
TnfP06804 Gm45874-201ENSMUST00000212423 346 ntBASIC6.11□□□□□ -1.43
TnfP06804 Gm10799-201ENSMUST00000099666 312 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
TnfP06804 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
TnfP06804 Spata6-203ENSMUST00000084354 2239 ntTSL 5 BASIC6.11□□□□□ -1.43
TnfP06804 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC6.11□□□□□ -1.43
TnfP06804 Gm8700-201ENSMUST00000222187 3054 ntBASIC6.11□□□□□ -1.43
TnfP06804 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
TnfP06804 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TnfP06804 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
TnfP06804 Olfr1423-202ENSMUST00000214472 5570 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
TnfP06804 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
TnfP06804 Igsf10-203ENSMUST00000194546 8393 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
TnfP06804 Gm33336-201ENSMUST00000219656 1676 ntTSL 5 BASIC6.1□□□□□ -1.43
TnfP06804 AC124581.3-201ENSMUST00000224270 1624 ntBASIC6.1□□□□□ -1.43
TnfP06804 Naip2-201ENSMUST00000067975 4709 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
TnfP06804 Il13ra2-201ENSMUST00000033646 2281 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms