Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Gm28886-202ENSMUST00000187889 484 ntBASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Gm28554-201ENSMUST00000187964 174 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Gm28984-201ENSMUST00000188202 174 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Gm21529-202ENSMUST00000188473 174 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Gm28604-202ENSMUST00000188638 174 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Gm21588-202ENSMUST00000188721 174 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Gm21539-202ENSMUST00000188764 174 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Gm28216-201ENSMUST00000188785 174 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Gm29645-201ENSMUST00000189117 174 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Gm28554-202ENSMUST00000189175 484 ntBASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Gm21413-201ENSMUST00000189224 174 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Gm21723-202ENSMUST00000189444 174 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Gm36782-201ENSMUST00000189459 174 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Gm21419-201ENSMUST00000189495 173 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Gm28566-202ENSMUST00000189532 174 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Gm29213-202ENSMUST00000189703 484 ntBASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Gm21626-202ENSMUST00000189751 174 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Gm28851-202ENSMUST00000189757 484 ntBASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Gm28656-201ENSMUST00000190017 174 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Gm28461-201ENSMUST00000190023 484 ntBASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Gm21562-202ENSMUST00000190314 174 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Gm28517-201ENSMUST00000190343 174 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Gm29531-201ENSMUST00000190569 174 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Gm21914-202ENSMUST00000190577 174 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Gm20978-201ENSMUST00000190688 174 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Gm20963-201ENSMUST00000190880 174 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Gm29316-201ENSMUST00000190953 174 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Gm29351-201ENSMUST00000191052 174 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Gm29466-201ENSMUST00000191077 174 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Gm20987-201ENSMUST00000191165 174 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Gm28194-202ENSMUST00000191217 174 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Gm28461-202ENSMUST00000191406 174 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Gm37610-201ENSMUST00000191867 620 ntTSL 3 BASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Gm37927-201ENSMUST00000192238 174 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Gm37544-201ENSMUST00000192803 174 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Gm37635-201ENSMUST00000193129 174 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Gm21809-202ENSMUST00000194072 174 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Igkv3-8-201ENSMUST00000197635 339 ntBASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Gm18422-201ENSMUST00000203663 1032 ntBASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Olfr228-201ENSMUST00000216534 942 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Scn3aA2ASI5 5033424D13Rik-201ENSMUST00000221779 648 ntBASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Gm6104-201ENSMUST00000078030 603 ntBASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Olfr1106-201ENSMUST00000099867 939 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Itch-202ENSMUST00000109685 5309 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Scn3aA2ASI5 CT025604.1-201ENSMUST00000221111 3436 ntBASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Tnfaip3-202ENSMUST00000105527 4334 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Unc13b-216ENSMUST00000207708 6574 ntTSL 5 BASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Mageb18-201ENSMUST00000088137 1571 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Olfr430-203ENSMUST00000214390 3300 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Huwe1-201ENSMUST00000026292 14579 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Scn3aA2ASI5 1700061H18Rik-201ENSMUST00000139488 634 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Scn3aA2ASI5 Gm20453-201ENSMUST00000173968 226 ntBASIC6.38□□□□□ -1.39
Scn3aA2ASI5 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC6.38□□□□□ -1.39
Scn3aA2ASI5 Gm39090-202ENSMUST00000205992 508 ntTSL 5 BASIC6.38□□□□□ -1.39
Scn3aA2ASI5 AC119892.1-201ENSMUST00000217997 384 ntTSL 3 BASIC6.38□□□□□ -1.39
Scn3aA2ASI5 AC165347.1-201ENSMUST00000224089 1025 ntBASIC6.38□□□□□ -1.39
Scn3aA2ASI5 Gm23686-201ENSMUST00000083241 164 ntBASIC6.38□□□□□ -1.39
Scn3aA2ASI5 Sptssb-201ENSMUST00000051239 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Scn3aA2ASI5 Ksr2-202ENSMUST00000180430 13125 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Scn3aA2ASI5 Gm9573-201ENSMUST00000164502 5231 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Scn3aA2ASI5 Zfp606-205ENSMUST00000209403 2211 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Scn3aA2ASI5 AC159002.2-201ENSMUST00000228843 4874 ntBASIC6.38□□□□□ -1.39
Scn3aA2ASI5 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Scn3aA2ASI5 Gm5886-203ENSMUST00000203983 2613 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Scn3aA2ASI5 Gm20300-201ENSMUST00000214634 3440 ntBASIC6.38□□□□□ -1.39
Scn3aA2ASI5 Scaper-202ENSMUST00000214747 5231 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Scn3aA2ASI5 Pcdh15-204ENSMUST00000105426 6802 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Scn3aA2ASI5 Gm6526-201ENSMUST00000100643 1723 ntAPPRIS P5 TSL 5 BASIC6.38□□□□□ -1.39
Scn3aA2ASI5 Gm45470-201ENSMUST00000209685 7044 ntTSL 5 BASIC6.38□□□□□ -1.39
Scn3aA2ASI5 Trav12n-1-201ENSMUST00000103587 344 ntAPPRIS ALT2 BASIC6.38□□□□□ -1.39
Scn3aA2ASI5 Gm12655-202ENSMUST00000133884 925 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Scn3aA2ASI5 Gm26170-201ENSMUST00000158419 148 ntBASIC6.38□□□□□ -1.39
Scn3aA2ASI5 Gm8032-201ENSMUST00000171009 574 ntBASIC6.38□□□□□ -1.39
Scn3aA2ASI5 Trav12d-1-202ENSMUST00000183652 344 ntAPPRIS ALT2 BASIC6.38□□□□□ -1.39
Scn3aA2ASI5 Gm27148-201ENSMUST00000185086 160 ntBASIC6.38□□□□□ -1.39
Scn3aA2ASI5 Gm37982-201ENSMUST00000193076 561 ntTSL 5 BASIC6.38□□□□□ -1.39
Scn3aA2ASI5 Gm37152-201ENSMUST00000193369 1175 ntBASIC6.38□□□□□ -1.39
Scn3aA2ASI5 Gm43616-201ENSMUST00000199347 409 ntTSL 3 BASIC6.38□□□□□ -1.39
Scn3aA2ASI5 Olfr519-202ENSMUST00000202706 945 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Scn3aA2ASI5 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC6.38□□□□□ -1.39
Scn3aA2ASI5 Gm45525-201ENSMUST00000210800 389 ntBASIC6.38□□□□□ -1.39
Scn3aA2ASI5 AC158525.1-201ENSMUST00000223806 576 ntBASIC6.38□□□□□ -1.39
Scn3aA2ASI5 AC164315.1-201ENSMUST00000226452 708 ntBASIC6.38□□□□□ -1.39
Scn3aA2ASI5 Vmn1r16-201ENSMUST00000227168 912 ntAPPRIS P2 BASIC6.38□□□□□ -1.39
Scn3aA2ASI5 Mir188-201ENSMUST00000083464 68 ntBASIC6.38□□□□□ -1.39
Scn3aA2ASI5 4933411E08Rik-201ENSMUST00000217950 1689 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Scn3aA2ASI5 Vmn2r80-201ENSMUST00000165834 2690 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Scn3aA2ASI5 Gm42923-201ENSMUST00000198438 2896 ntBASIC6.38□□□□□ -1.39
Scn3aA2ASI5 Pcbp2-203ENSMUST00000108838 2775 ntAPPRIS ALT1 TSL 2 BASIC6.38□□□□□ -1.39
Scn3aA2ASI5 Gm13590-201ENSMUST00000120183 1588 ntBASIC6.38□□□□□ -1.39
Scn3aA2ASI5 Gm43488-201ENSMUST00000198874 2504 ntBASIC6.37□□□□□ -1.39
Scn3aA2ASI5 Gab3-203ENSMUST00000114109 2093 ntTSL 2 BASIC6.37□□□□□ -1.39
Scn3aA2ASI5 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
Scn3aA2ASI5 Klrd1-202ENSMUST00000112063 895 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Scn3aA2ASI5 Gm11987-201ENSMUST00000118524 381 ntBASIC6.37□□□□□ -1.39
Scn3aA2ASI5 Gm15400-201ENSMUST00000118944 601 ntBASIC6.37□□□□□ -1.39
Scn3aA2ASI5 Gm11894-201ENSMUST00000121579 328 ntBASIC6.37□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms