Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Axdnd1-210ENSMUST00000212747 1238 ntTSL 5 BASIC5.74□□□□□ -1.49
H2afb2S4R1M3 Gm31432-201ENSMUST00000214727 538 ntTSL 5 BASIC5.74□□□□□ -1.49
H2afb2S4R1M3 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC5.74□□□□□ -1.49
H2afb2S4R1M3 AC133650.1-201ENSMUST00000217243 578 ntBASIC5.74□□□□□ -1.49
H2afb2S4R1M3 Gm34574-201ENSMUST00000217795 1240 ntTSL 5 BASIC5.74□□□□□ -1.49
H2afb2S4R1M3 Zfand4-204ENSMUST00000221069 501 ntTSL 3 BASIC5.74□□□□□ -1.49
H2afb2S4R1M3 AC154718.1-201ENSMUST00000226676 250 ntBASIC5.74□□□□□ -1.49
H2afb2S4R1M3 AC152394.2-202ENSMUST00000228503 1064 ntBASIC5.74□□□□□ -1.49
H2afb2S4R1M3 Gm22684-201ENSMUST00000082849 132 ntBASIC5.74□□□□□ -1.49
H2afb2S4R1M3 Olfr55-203ENSMUST00000214891 4428 ntTSL 5 BASIC5.74□□□□□ -1.49
H2afb2S4R1M3 Olfr994-204ENSMUST00000217218 1460 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
H2afb2S4R1M3 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
H2afb2S4R1M3 Papola-215ENSMUST00000170002 2605 ntTSL 5 BASIC5.74□□□□□ -1.49
H2afb2S4R1M3 Gm37082-201ENSMUST00000192629 1927 ntBASIC5.74□□□□□ -1.49
H2afb2S4R1M3 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
H2afb2S4R1M3 Tgif1-210ENSMUST00000172229 1446 ntAPPRIS ALT1 TSL 3 BASIC5.74□□□□□ -1.49
H2afb2S4R1M3 Gm5799-201ENSMUST00000169023 1314 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
H2afb2S4R1M3 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
H2afb2S4R1M3 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
H2afb2S4R1M3 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
H2afb2S4R1M3 Gm43302-201ENSMUST00000050011 4310 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
H2afb2S4R1M3 Vmn2r98-201ENSMUST00000170424 2574 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
H2afb2S4R1M3 Gm38248-201ENSMUST00000193744 5783 ntBASIC5.73□□□□□ -1.49
H2afb2S4R1M3 Gm44660-201ENSMUST00000207134 2465 ntBASIC5.73□□□□□ -1.49
H2afb2S4R1M3 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
H2afb2S4R1M3 AC122355.1-201ENSMUST00000228155 4184 ntBASIC5.73□□□□□ -1.49
H2afb2S4R1M3 Olfr380-202ENSMUST00000121209 1669 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
H2afb2S4R1M3 9330159M07Rik-201ENSMUST00000180712 2702 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
H2afb2S4R1M3 Gm14886-201ENSMUST00000117208 2629 ntBASIC5.73□□□□□ -1.49
H2afb2S4R1M3 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC5.73□□□□□ -1.49
H2afb2S4R1M3 Gm11852-201ENSMUST00000120806 222 ntBASIC5.73□□□□□ -1.49
H2afb2S4R1M3 4930551O13Rik-201ENSMUST00000145585 1065 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
H2afb2S4R1M3 Gm25227-201ENSMUST00000158204 112 ntBASIC5.73□□□□□ -1.49
H2afb2S4R1M3 Gm24363-201ENSMUST00000158440 311 ntBASIC5.73□□□□□ -1.49
H2afb2S4R1M3 Gm9006-201ENSMUST00000165520 841 ntBASIC5.73□□□□□ -1.49
H2afb2S4R1M3 Tmem258-204ENSMUST00000166412 447 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
H2afb2S4R1M3 Gm9597-201ENSMUST00000171913 602 ntBASIC5.73□□□□□ -1.49
H2afb2S4R1M3 Vmn2r-ps4-201ENSMUST00000176989 1015 ntBASIC5.73□□□□□ -1.49
H2afb2S4R1M3 Gm19560-201ENSMUST00000177510 514 ntBASIC5.73□□□□□ -1.49
H2afb2S4R1M3 Rpain-213ENSMUST00000178822 566 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
H2afb2S4R1M3 Scgb3a2-202ENSMUST00000187157 550 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
H2afb2S4R1M3 Gm37591-201ENSMUST00000193283 650 ntTSL 3 BASIC5.73□□□□□ -1.49
H2afb2S4R1M3 Fxyd4-207ENSMUST00000204214 550 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
H2afb2S4R1M3 Gm44239-201ENSMUST00000204228 271 ntBASIC5.73□□□□□ -1.49
H2afb2S4R1M3 Gm44997-202ENSMUST00000205970 425 ntTSL 3 BASIC5.73□□□□□ -1.49
H2afb2S4R1M3 Gm31166-201ENSMUST00000209326 288 ntBASIC5.73□□□□□ -1.49
H2afb2S4R1M3 Gm45628-201ENSMUST00000210849 274 ntBASIC5.73□□□□□ -1.49
H2afb2S4R1M3 Gm18252-202ENSMUST00000214886 409 ntTSL 5 BASIC5.73□□□□□ -1.49
H2afb2S4R1M3 Gm36855-202ENSMUST00000216439 754 ntTSL 3 BASIC5.73□□□□□ -1.49
H2afb2S4R1M3 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC5.73□□□□□ -1.49
H2afb2S4R1M3 AC155941.1-201ENSMUST00000220223 529 ntBASIC5.73□□□□□ -1.49
H2afb2S4R1M3 AC165092.4-201ENSMUST00000225025 679 ntBASIC5.73□□□□□ -1.49
H2afb2S4R1M3 4931400O07Rik-201ENSMUST00000033537 647 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
H2afb2S4R1M3 Olfr994-201ENSMUST00000099925 945 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
H2afb2S4R1M3 4930529C04Rik-201ENSMUST00000131367 3534 ntBASIC5.73□□□□□ -1.49
H2afb2S4R1M3 Palmd-202ENSMUST00000119557 3305 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
H2afb2S4R1M3 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
H2afb2S4R1M3 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
H2afb2S4R1M3 Klrb1f-201ENSMUST00000032257 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
H2afb2S4R1M3 Vmn2r3-202ENSMUST00000176328 2748 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
H2afb2S4R1M3 Gm43682-201ENSMUST00000202150 2090 ntBASIC5.73□□□□□ -1.49
H2afb2S4R1M3 Gm20276-201ENSMUST00000216122 2648 ntBASIC5.73□□□□□ -1.49
H2afb2S4R1M3 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
H2afb2S4R1M3 Mme-205ENSMUST00000194134 8039 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
H2afb2S4R1M3 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC5.73□□□□□ -1.49
H2afb2S4R1M3 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
H2afb2S4R1M3 Gm38224-201ENSMUST00000191648 2100 ntBASIC5.72□□□□□ -1.49
H2afb2S4R1M3 Naip2-201ENSMUST00000067975 4709 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
H2afb2S4R1M3 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
H2afb2S4R1M3 Gm6882-202ENSMUST00000207192 2365 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
H2afb2S4R1M3 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
H2afb2S4R1M3 Zfp26-203ENSMUST00000159569 11276 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
H2afb2S4R1M3 Gm37846-201ENSMUST00000191840 3774 ntBASIC5.72□□□□□ -1.49
H2afb2S4R1M3 Ugt8a-203ENSMUST00000198610 3762 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
H2afb2S4R1M3 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
H2afb2S4R1M3 Gm43169-201ENSMUST00000199544 4734 ntBASIC5.72□□□□□ -1.49
H2afb2S4R1M3 Olfr441-202ENSMUST00000213649 2402 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
H2afb2S4R1M3 Olfr341-201ENSMUST00000100154 942 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
H2afb2S4R1M3 Klrb1-201ENSMUST00000112110 724 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
H2afb2S4R1M3 Gm13772-201ENSMUST00000118431 317 ntBASIC5.72□□□□□ -1.49
H2afb2S4R1M3 Gm15331-201ENSMUST00000120225 385 ntBASIC5.72□□□□□ -1.49
H2afb2S4R1M3 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
H2afb2S4R1M3 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
H2afb2S4R1M3 Sox5os3-202ENSMUST00000154167 765 ntTSL 3 BASIC5.72□□□□□ -1.49
H2afb2S4R1M3 Gm25439-201ENSMUST00000158280 131 ntBASIC5.72□□□□□ -1.49
H2afb2S4R1M3 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
H2afb2S4R1M3 Gm17206-201ENSMUST00000168123 577 ntTSL 5 BASIC5.72□□□□□ -1.49
H2afb2S4R1M3 BC050972-202ENSMUST00000169153 467 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
H2afb2S4R1M3 Astx4a-201ENSMUST00000177683 1149 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
H2afb2S4R1M3 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
H2afb2S4R1M3 Astx4c-201ENSMUST00000178390 1149 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
H2afb2S4R1M3 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
H2afb2S4R1M3 Astx2-201ENSMUST00000179135 1150 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
H2afb2S4R1M3 Astx4b-201ENSMUST00000179359 1149 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
H2afb2S4R1M3 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
H2afb2S4R1M3 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
H2afb2S4R1M3 Astx6-201ENSMUST00000180281 1150 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
H2afb2S4R1M3 Gm28351-201ENSMUST00000186261 559 ntTSL 5 BASIC5.72□□□□□ -1.49
H2afb2S4R1M3 Gm29409-202ENSMUST00000189623 901 ntTSL 5 BASIC5.72□□□□□ -1.49
H2afb2S4R1M3 Ighv5-19-201ENSMUST00000193466 297 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 100.3 ms