Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Zfp426-208ENSMUST00000166005 1653 ntAPPRIS P3 TSL 5 BASIC5.64□□□□□ -1.51
Lima1Q9ERG0 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Lima1Q9ERG0 Hspe1-ps5-201ENSMUST00000118080 297 ntBASIC5.64□□□□□ -1.51
Lima1Q9ERG0 Rpl21-ps9-201ENSMUST00000119897 482 ntBASIC5.64□□□□□ -1.51
Lima1Q9ERG0 Gm6620-201ENSMUST00000120113 715 ntBASIC5.64□□□□□ -1.51
Lima1Q9ERG0 Gm11761-201ENSMUST00000121392 445 ntBASIC5.64□□□□□ -1.51
Lima1Q9ERG0 Gm11341-201ENSMUST00000122316 447 ntBASIC5.64□□□□□ -1.51
Lima1Q9ERG0 Gm12631-201ENSMUST00000130576 637 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Lima1Q9ERG0 AI838599-201ENSMUST00000133960 2953 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Lima1Q9ERG0 Gm22223-201ENSMUST00000157360 125 ntBASIC5.64□□□□□ -1.51
Lima1Q9ERG0 Gm26923-201ENSMUST00000182615 996 ntBASIC5.64□□□□□ -1.51
Lima1Q9ERG0 Gm28885-201ENSMUST00000185615 563 ntBASIC5.64□□□□□ -1.51
Lima1Q9ERG0 Gm8581-201ENSMUST00000188636 890 ntBASIC5.64□□□□□ -1.51
Lima1Q9ERG0 Gm28066-201ENSMUST00000188657 472 ntBASIC5.64□□□□□ -1.51
Lima1Q9ERG0 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Lima1Q9ERG0 Lax1-202ENSMUST00000189524 628 ntTSL 2 BASIC5.64□□□□□ -1.51
Lima1Q9ERG0 Gm37341-201ENSMUST00000194680 371 ntBASIC5.64□□□□□ -1.51
Lima1Q9ERG0 Gm1969-201ENSMUST00000198125 1220 ntBASIC5.64□□□□□ -1.51
Lima1Q9ERG0 Gm2602-201ENSMUST00000202112 571 ntBASIC5.64□□□□□ -1.51
Lima1Q9ERG0 Gm36328-201ENSMUST00000204237 432 ntTSL 3 BASIC5.64□□□□□ -1.51
Lima1Q9ERG0 1700093K21Rik-201ENSMUST00000020527 1030 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Lima1Q9ERG0 Gm6850-201ENSMUST00000210031 530 ntBASIC5.64□□□□□ -1.51
Lima1Q9ERG0 Gm34263-202ENSMUST00000214353 303 ntTSL 5 BASIC5.64□□□□□ -1.51
Lima1Q9ERG0 AC153821.1-201ENSMUST00000217893 581 ntTSL 2 BASIC5.64□□□□□ -1.51
Lima1Q9ERG0 AC118230.1-201ENSMUST00000220196 656 ntBASIC5.64□□□□□ -1.51
Lima1Q9ERG0 AC192616.2-201ENSMUST00000221482 3841 ntBASIC5.64□□□□□ -1.51
Lima1Q9ERG0 Prl2c2-203ENSMUST00000221612 596 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Lima1Q9ERG0 AV026068-220ENSMUST00000224153 1147 ntBASIC5.64□□□□□ -1.51
Lima1Q9ERG0 AC154283.1-201ENSMUST00000228417 389 ntBASIC5.64□□□□□ -1.51
Lima1Q9ERG0 Sbpl-201ENSMUST00000024939 870 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Lima1Q9ERG0 Rps26-201ENSMUST00000026420 681 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Lima1Q9ERG0 Olfr161-201ENSMUST00000061541 942 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Lima1Q9ERG0 Gm23624-201ENSMUST00000082463 321 ntBASIC5.64□□□□□ -1.51
Lima1Q9ERG0 Gm44175-201ENSMUST00000204863 4256 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Lima1Q9ERG0 Ryr3-211ENSMUST00000208290 15468 ntAPPRIS P3 TSL 5 BASIC5.64□□□□□ -1.51
Lima1Q9ERG0 Gm42873-201ENSMUST00000196110 1726 ntBASIC5.64□□□□□ -1.51
Lima1Q9ERG0 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Lima1Q9ERG0 Cyp39a1-201ENSMUST00000170988 3053 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Lima1Q9ERG0 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Lima1Q9ERG0 Gm26608-202ENSMUST00000181503 1362 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Lima1Q9ERG0 Rag2-202ENSMUST00000111227 1857 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Lima1Q9ERG0 AC117570.1-201ENSMUST00000214015 1886 ntTSL 5 BASIC5.64□□□□□ -1.51
Lima1Q9ERG0 Gm38299-201ENSMUST00000193214 3789 ntBASIC5.64□□□□□ -1.51
Lima1Q9ERG0 Olfr55-204ENSMUST00000216633 4758 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Lima1Q9ERG0 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
Lima1Q9ERG0 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Lima1Q9ERG0 Tet1-201ENSMUST00000050826 13986 ntAPPRIS P3 TSL 5 BASIC5.64□□□□□ -1.51
Lima1Q9ERG0 Mtx3-201ENSMUST00000076169 6275 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Lima1Q9ERG0 Syt4-201ENSMUST00000025110 3901 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Lima1Q9ERG0 Gm9077-201ENSMUST00000210657 2298 ntBASIC5.63□□□□□ -1.51
Lima1Q9ERG0 Gm10378-201ENSMUST00000100696 429 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Lima1Q9ERG0 Gm11561-201ENSMUST00000117429 417 ntBASIC5.63□□□□□ -1.51
Lima1Q9ERG0 Gm14842-201ENSMUST00000119577 269 ntBASIC5.63□□□□□ -1.51
Lima1Q9ERG0 Gm12307-201ENSMUST00000120581 590 ntBASIC5.63□□□□□ -1.51
Lima1Q9ERG0 Gm11882-201ENSMUST00000121463 506 ntBASIC5.63□□□□□ -1.51
Lima1Q9ERG0 Gm13363-201ENSMUST00000122008 522 ntBASIC5.63□□□□□ -1.51
Lima1Q9ERG0 Gm14092-201ENSMUST00000136794 617 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Lima1Q9ERG0 Gm11731-201ENSMUST00000139704 670 ntTSL 3 BASIC5.63□□□□□ -1.51
Lima1Q9ERG0 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC5.63□□□□□ -1.51
Lima1Q9ERG0 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC5.63□□□□□ -1.51
Lima1Q9ERG0 Gm8032-201ENSMUST00000171009 574 ntBASIC5.63□□□□□ -1.51
Lima1Q9ERG0 Mirt2-201ENSMUST00000175179 285 ntBASIC5.63□□□□□ -1.51
Lima1Q9ERG0 Mir3060-201ENSMUST00000175339 83 ntBASIC5.63□□□□□ -1.51
Lima1Q9ERG0 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
Lima1Q9ERG0 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC5.63□□□□□ -1.51
Lima1Q9ERG0 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
Lima1Q9ERG0 Gm28064-201ENSMUST00000185639 858 ntBASIC5.63□□□□□ -1.51
Lima1Q9ERG0 Gm3143-201ENSMUST00000196308 580 ntTSL 3 BASIC5.63□□□□□ -1.51
Lima1Q9ERG0 Gm44382-201ENSMUST00000198683 122 ntBASIC5.63□□□□□ -1.51
Lima1Q9ERG0 Gm42109-202ENSMUST00000200893 664 ntTSL 3 BASIC5.63□□□□□ -1.51
Lima1Q9ERG0 4930518I17Rik-201ENSMUST00000203902 656 ntBASIC5.63□□□□□ -1.51
Lima1Q9ERG0 Gm44955-201ENSMUST00000208843 229 ntTSL 5 BASIC5.63□□□□□ -1.51
Lima1Q9ERG0 BC024386-204ENSMUST00000209842 688 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Lima1Q9ERG0 Gm45724-201ENSMUST00000213031 420 ntBASIC5.63□□□□□ -1.51
Lima1Q9ERG0 AC153845.2-203ENSMUST00000215889 617 ntTSL 3 BASIC5.63□□□□□ -1.51
Lima1Q9ERG0 AC121947.1-201ENSMUST00000221755 1145 ntBASIC5.63□□□□□ -1.51
Lima1Q9ERG0 AC156576.2-202ENSMUST00000222525 411 ntBASIC5.63□□□□□ -1.51
Lima1Q9ERG0 AC123061.2-201ENSMUST00000226234 802 ntBASIC5.63□□□□□ -1.51
Lima1Q9ERG0 AC166105.1-201ENSMUST00000227512 482 ntBASIC5.63□□□□□ -1.51
Lima1Q9ERG0 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Lima1Q9ERG0 Gm7995-201ENSMUST00000089789 429 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Lima1Q9ERG0 Mup8-201ENSMUST00000095058 925 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
Lima1Q9ERG0 Gm17165-201ENSMUST00000096155 493 ntBASIC5.63□□□□□ -1.51
Lima1Q9ERG0 Olfr570-201ENSMUST00000098215 1045 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Lima1Q9ERG0 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Lima1Q9ERG0 Gabrb1-201ENSMUST00000031122 13737 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Lima1Q9ERG0 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Lima1Q9ERG0 Gm12794-201ENSMUST00000052027 1452 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Lima1Q9ERG0 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC5.63□□□□□ -1.51
Lima1Q9ERG0 Dnah3-204ENSMUST00000209154 12265 ntAPPRIS P5 TSL 5 BASIC5.63□□□□□ -1.51
Lima1Q9ERG0 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Lima1Q9ERG0 Creb5-203ENSMUST00000203528 7917 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
Lima1Q9ERG0 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Lima1Q9ERG0 Olfr419-202ENSMUST00000214725 2685 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Lima1Q9ERG0 Gm37482-201ENSMUST00000194899 2791 ntBASIC5.62□□□□□ -1.51
Lima1Q9ERG0 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Lima1Q9ERG0 Gm39327-201ENSMUST00000213594 1982 ntTSL 5 BASIC5.62□□□□□ -1.51
Lima1Q9ERG0 Fat2-201ENSMUST00000068853 14528 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Lima1Q9ERG0 Map9-201ENSMUST00000091014 6218 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Lima1Q9ERG0 Spef2-201ENSMUST00000041840 4247 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms