Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm5554-201ENSMUST00000199726 1206 ntBASIC5.47□□□□□ -1.53
Cdc40Q9DC48 Trav3d-2-201ENSMUST00000199874 334 ntBASIC5.47□□□□□ -1.53
Cdc40Q9DC48 Gm7890-201ENSMUST00000204877 601 ntBASIC5.47□□□□□ -1.53
Cdc40Q9DC48 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC5.47□□□□□ -1.53
Cdc40Q9DC48 Gm6145-205ENSMUST00000211114 1148 ntTSL 5 BASIC5.47□□□□□ -1.53
Cdc40Q9DC48 Gm45241-201ENSMUST00000211237 634 ntTSL 5 BASIC5.47□□□□□ -1.53
Cdc40Q9DC48 CT485607.3-201ENSMUST00000213361 672 ntBASIC5.47□□□□□ -1.53
Cdc40Q9DC48 AC117245.2-201ENSMUST00000216943 570 ntTSL 5 BASIC5.47□□□□□ -1.53
Cdc40Q9DC48 Gm8633-201ENSMUST00000218457 558 ntTSL 3 BASIC5.47□□□□□ -1.53
Cdc40Q9DC48 AC154767.2-201ENSMUST00000224584 414 ntBASIC5.47□□□□□ -1.53
Cdc40Q9DC48 AC132317.2-201ENSMUST00000227301 519 ntBASIC5.47□□□□□ -1.53
Cdc40Q9DC48 Scgb2b24-201ENSMUST00000055444 523 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Cdc40Q9DC48 Olfr1023-201ENSMUST00000056408 936 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Cdc40Q9DC48 Olfr568-201ENSMUST00000098216 942 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Cdc40Q9DC48 Olfr1217-201ENSMUST00000099799 1105 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Cdc40Q9DC48 Bmpr1b-204ENSMUST00000106232 4164 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Cdc40Q9DC48 Gm10220-201ENSMUST00000088236 2980 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Cdc40Q9DC48 Olfr341-202ENSMUST00000213300 6634 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Cdc40Q9DC48 Slco6b1-202ENSMUST00000178359 1778 ntBASIC5.47□□□□□ -1.53
Cdc40Q9DC48 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Cdc40Q9DC48 Olfr888-202ENSMUST00000211851 2930 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
Cdc40Q9DC48 Trhr-201ENSMUST00000038856 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Cdc40Q9DC48 Gm15457-201ENSMUST00000129513 3990 ntTSL 2 BASIC5.47□□□□□ -1.53
Cdc40Q9DC48 Wdr17-202ENSMUST00000127511 4668 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
Cdc40Q9DC48 Ifi202b-201ENSMUST00000000266 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Cdc40Q9DC48 Palmd-202ENSMUST00000119557 3305 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.53
Cdc40Q9DC48 Ppig-202ENSMUST00000090858 6127 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Cdc40Q9DC48 Pias1-202ENSMUST00000214830 2492 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Cdc40Q9DC48 Gm13090-201ENSMUST00000105667 746 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
Cdc40Q9DC48 Dynlt1-ps1-201ENSMUST00000117045 342 ntBASIC5.46□□□□□ -1.54
Cdc40Q9DC48 Gm15332-201ENSMUST00000118386 357 ntBASIC5.46□□□□□ -1.54
Cdc40Q9DC48 Gm11617-201ENSMUST00000119609 639 ntBASIC5.46□□□□□ -1.54
Cdc40Q9DC48 Olfr408-ps1-201ENSMUST00000121710 941 ntBASIC5.46□□□□□ -1.54
Cdc40Q9DC48 Gm11734-201ENSMUST00000132261 728 ntTSL 3 BASIC5.46□□□□□ -1.54
Cdc40Q9DC48 Eif5al3-ps-201ENSMUST00000135410 447 ntBASIC5.46□□□□□ -1.54
Cdc40Q9DC48 Fam229b-205ENSMUST00000135785 674 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
Cdc40Q9DC48 Fundc1-203ENSMUST00000142638 597 ntTSL 3 BASIC5.46□□□□□ -1.54
Cdc40Q9DC48 Gm25459-201ENSMUST00000157953 114 ntBASIC5.46□□□□□ -1.54
Cdc40Q9DC48 Gm25445-201ENSMUST00000158996 299 ntBASIC5.46□□□□□ -1.54
Cdc40Q9DC48 Gm16139-201ENSMUST00000160015 420 ntBASIC5.46□□□□□ -1.54
Cdc40Q9DC48 Gm22932-201ENSMUST00000175510 72 ntBASIC5.46□□□□□ -1.54
Cdc40Q9DC48 Mir6992-201ENSMUST00000183342 109 ntBASIC5.46□□□□□ -1.54
Cdc40Q9DC48 Mir7235-201ENSMUST00000183796 56 ntBASIC5.46□□□□□ -1.54
Cdc40Q9DC48 Mir7037-201ENSMUST00000184414 65 ntBASIC5.46□□□□□ -1.54
Cdc40Q9DC48 Gm37560-201ENSMUST00000194289 1000 ntBASIC5.46□□□□□ -1.54
Cdc40Q9DC48 Gm37774-201ENSMUST00000194401 245 ntBASIC5.46□□□□□ -1.54
Cdc40Q9DC48 Ighv1-27-201ENSMUST00000194473 340 ntBASIC5.46□□□□□ -1.54
Cdc40Q9DC48 C030018K13Rik-201ENSMUST00000196527 866 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Cdc40Q9DC48 Gm38562-201ENSMUST00000199398 1126 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Cdc40Q9DC48 Gm11360-201ENSMUST00000221898 262 ntBASIC5.46□□□□□ -1.54
Cdc40Q9DC48 4930519F16Rik-201ENSMUST00000033688 1113 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Cdc40Q9DC48 Defb2-201ENSMUST00000006745 305 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Cdc40Q9DC48 Tyr-201ENSMUST00000004770 6042 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Cdc40Q9DC48 Gm38403-201ENSMUST00000219032 2357 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Cdc40Q9DC48 Gm6125-201ENSMUST00000217983 3472 ntBASIC5.46□□□□□ -1.54
Cdc40Q9DC48 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Cdc40Q9DC48 Gm42702-201ENSMUST00000199515 4217 ntBASIC5.46□□□□□ -1.54
Cdc40Q9DC48 Slamf6-207ENSMUST00000195656 5729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Cdc40Q9DC48 Pign-206ENSMUST00000187537 4006 ntTSL 5 BASIC5.46□□□□□ -1.54
Cdc40Q9DC48 Gm11885-201ENSMUST00000118473 1428 ntBASIC5.46□□□□□ -1.54
Cdc40Q9DC48 Gm44102-201ENSMUST00000204031 1666 ntBASIC5.46□□□□□ -1.54
Cdc40Q9DC48 Olfr1311-203ENSMUST00000215321 2667 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Cdc40Q9DC48 Gm15023-201ENSMUST00000113183 3698 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Cdc40Q9DC48 AV320801-201ENSMUST00000068340 3698 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Cdc40Q9DC48 Cyp2j6-201ENSMUST00000030303 3605 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Cdc40Q9DC48 Gm26563-201ENSMUST00000181003 1704 ntTSL 5 BASIC5.45□□□□□ -1.54
Cdc40Q9DC48 Uty-204ENSMUST00000139365 4684 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Cdc40Q9DC48 Gm45413-201ENSMUST00000210389 3538 ntBASIC5.45□□□□□ -1.54
Cdc40Q9DC48 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Cdc40Q9DC48 Nfia-201ENSMUST00000052018 9249 ntTSL 5 BASIC5.45□□□□□ -1.54
Cdc40Q9DC48 Nlrp9a-203ENSMUST00000117252 2796 ntTSL 2 BASIC5.45□□□□□ -1.54
Cdc40Q9DC48 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Cdc40Q9DC48 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Cdc40Q9DC48 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Cdc40Q9DC48 Enpp2-201ENSMUST00000041591 3095 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
Cdc40Q9DC48 Olfr693-202ENSMUST00000215541 4015 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Cdc40Q9DC48 Wrn-202ENSMUST00000033991 6262 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Cdc40Q9DC48 Gm37775-201ENSMUST00000194120 2313 ntBASIC5.45□□□□□ -1.54
Cdc40Q9DC48 AC154682.1-201ENSMUST00000225871 3124 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Cdc40Q9DC48 Il1rl2-204ENSMUST00000194296 3908 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Cdc40Q9DC48 C230085N15Rik-201ENSMUST00000194893 4327 ntBASIC5.45□□□□□ -1.54
Cdc40Q9DC48 Mcf2-201ENSMUST00000033478 3659 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Cdc40Q9DC48 Gm37249-201ENSMUST00000195185 2869 ntBASIC5.45□□□□□ -1.54
Cdc40Q9DC48 Gm44416-201ENSMUST00000204055 2066 ntBASIC5.45□□□□□ -1.54
Cdc40Q9DC48 CT009734.1-201ENSMUST00000227657 1687 ntBASIC5.45□□□□□ -1.54
Cdc40Q9DC48 Pifo-201ENSMUST00000010280 956 ntAPPRIS P4 TSL 1 (best) BASIC5.45□□□□□ -1.54
Cdc40Q9DC48 Mir290a-201ENSMUST00000104627 83 ntBASIC5.45□□□□□ -1.54
Cdc40Q9DC48 Mup3-202ENSMUST00000107472 916 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Cdc40Q9DC48 Gm14115-201ENSMUST00000119242 482 ntBASIC5.45□□□□□ -1.54
Cdc40Q9DC48 Gm14998-201ENSMUST00000120502 495 ntBASIC5.45□□□□□ -1.54
Cdc40Q9DC48 Gm11990-201ENSMUST00000121505 897 ntBASIC5.45□□□□□ -1.54
Cdc40Q9DC48 Gm14587-201ENSMUST00000121714 658 ntBASIC5.45□□□□□ -1.54
Cdc40Q9DC48 Gm5218-201ENSMUST00000172270 465 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Cdc40Q9DC48 Mir7020-201ENSMUST00000183787 70 ntBASIC5.45□□□□□ -1.54
Cdc40Q9DC48 Gm6850-201ENSMUST00000210031 530 ntBASIC5.45□□□□□ -1.54
Cdc40Q9DC48 AC132232.1-201ENSMUST00000214667 1019 ntTSL 3 BASIC5.45□□□□□ -1.54
Cdc40Q9DC48 Gm39336-201ENSMUST00000214933 260 ntTSL 3 BASIC5.45□□□□□ -1.54
Cdc40Q9DC48 Gm18409-202ENSMUST00000220105 529 ntBASIC5.45□□□□□ -1.54
Cdc40Q9DC48 AC132121.1-201ENSMUST00000220774 332 ntBASIC5.45□□□□□ -1.54
Cdc40Q9DC48 Spink14-201ENSMUST00000060328 566 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms