Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm40348-201ENSMUST00000199648 452 ntTSL 3 BASIC6.64□□□□□ -1.35
Ddx56Q9D0R4 Gm43203-201ENSMUST00000200130 558 ntBASIC6.64□□□□□ -1.35
Ddx56Q9D0R4 Mageb16-ps2-201ENSMUST00000204513 1093 ntBASIC6.64□□□□□ -1.35
Ddx56Q9D0R4 Gm45034-201ENSMUST00000206831 482 ntBASIC6.64□□□□□ -1.35
Ddx56Q9D0R4 Gm44984-201ENSMUST00000207802 394 ntBASIC6.64□□□□□ -1.35
Ddx56Q9D0R4 Gm45524-201ENSMUST00000211374 1250 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Ddx56Q9D0R4 Olfr528-ps1-201ENSMUST00000211655 728 ntBASIC6.64□□□□□ -1.35
Ddx56Q9D0R4 AC101709.1-201ENSMUST00000220276 909 ntTSL 5 BASIC6.64□□□□□ -1.35
Ddx56Q9D0R4 AC132833.3-201ENSMUST00000227472 866 ntBASIC6.64□□□□□ -1.35
Ddx56Q9D0R4 Olfr148-201ENSMUST00000050807 1017 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Ddx56Q9D0R4 BC061195-201ENSMUST00000088133 577 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Ddx56Q9D0R4 1700003E24Rik-201ENSMUST00000088134 577 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Ddx56Q9D0R4 Olfr338-202ENSMUST00000091006 921 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Ddx56Q9D0R4 Cldn34b3-201ENSMUST00000096389 1077 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ddx56Q9D0R4 Olfr1046-201ENSMUST00000099902 951 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Ddx56Q9D0R4 Cnga1-201ENSMUST00000087213 2739 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ddx56Q9D0R4 Atp10b-201ENSMUST00000077659 6825 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Ddx56Q9D0R4 Olfr1188-202ENSMUST00000217131 1406 ntAPPRIS ALT2 TSL 3 BASIC6.64□□□□□ -1.35
Ddx56Q9D0R4 Ctage5-202ENSMUST00000069430 2869 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Ddx56Q9D0R4 Vmn2r87-201ENSMUST00000164227 3036 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Ddx56Q9D0R4 Olfr685-202ENSMUST00000209409 3179 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
Ddx56Q9D0R4 Vezt-204ENSMUST00000119818 11138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ddx56Q9D0R4 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
Ddx56Q9D0R4 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Ddx56Q9D0R4 Gm8401-201ENSMUST00000120248 1739 ntBASIC6.64□□□□□ -1.35
Ddx56Q9D0R4 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ddx56Q9D0R4 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC6.64□□□□□ -1.35
Ddx56Q9D0R4 AC131687.1-201ENSMUST00000225931 5446 ntBASIC6.64□□□□□ -1.35
Ddx56Q9D0R4 Mbd3l2-202ENSMUST00000213777 2116 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ddx56Q9D0R4 Yae1d1-201ENSMUST00000099735 8744 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ddx56Q9D0R4 Ros1-202ENSMUST00000218452 6960 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
Ddx56Q9D0R4 Osbpl9-213ENSMUST00000160271 2604 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Ddx56Q9D0R4 Gm11290-204ENSMUST00000224688 3042 ntBASIC6.63□□□□□ -1.35
Ddx56Q9D0R4 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Ddx56Q9D0R4 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Ddx56Q9D0R4 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Ddx56Q9D0R4 Gm13469-201ENSMUST00000118231 350 ntBASIC6.63□□□□□ -1.35
Ddx56Q9D0R4 Gm12375-201ENSMUST00000119331 921 ntBASIC6.63□□□□□ -1.35
Ddx56Q9D0R4 Palmd-202ENSMUST00000119557 3305 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Ddx56Q9D0R4 Gm12115-201ENSMUST00000119969 447 ntBASIC6.63□□□□□ -1.35
Ddx56Q9D0R4 Gm16129-201ENSMUST00000152628 486 ntBASIC6.63□□□□□ -1.35
Ddx56Q9D0R4 Gm16298-201ENSMUST00000161107 420 ntBASIC6.63□□□□□ -1.35
Ddx56Q9D0R4 1700071M16Rik-203ENSMUST00000169733 2504 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Ddx56Q9D0R4 Eps15-207ENSMUST00000175776 2802 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
Ddx56Q9D0R4 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC6.63□□□□□ -1.35
Ddx56Q9D0R4 Gm24417-201ENSMUST00000178123 79 ntBASIC6.63□□□□□ -1.35
Ddx56Q9D0R4 Gm24653-201ENSMUST00000178541 79 ntBASIC6.63□□□□□ -1.35
Ddx56Q9D0R4 Gm25934-201ENSMUST00000178642 79 ntBASIC6.63□□□□□ -1.35
Ddx56Q9D0R4 Mlip-214ENSMUST00000185039 1295 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Ddx56Q9D0R4 Gm27985-201ENSMUST00000185112 378 ntBASIC6.63□□□□□ -1.35
Ddx56Q9D0R4 Scgb1b17-201ENSMUST00000187081 417 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Ddx56Q9D0R4 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Ddx56Q9D0R4 Gm29053-201ENSMUST00000187484 370 ntTSL 5 BASIC6.63□□□□□ -1.35
Ddx56Q9D0R4 Scgb1b15-201ENSMUST00000189118 417 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Ddx56Q9D0R4 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Ddx56Q9D0R4 Fasl-202ENSMUST00000193648 406 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Ddx56Q9D0R4 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC6.63□□□□□ -1.35
Ddx56Q9D0R4 Gm8869-201ENSMUST00000195222 947 ntBASIC6.63□□□□□ -1.35
Ddx56Q9D0R4 Eif4e-202ENSMUST00000196990 856 ntTSL 3 BASIC6.63□□□□□ -1.35
Ddx56Q9D0R4 Gm43157-201ENSMUST00000198223 412 ntBASIC6.63□□□□□ -1.35
Ddx56Q9D0R4 Gm18805-201ENSMUST00000206872 655 ntBASIC6.63□□□□□ -1.35
Ddx56Q9D0R4 Gm45431-201ENSMUST00000210143 588 ntTSL 5 BASIC6.63□□□□□ -1.35
Ddx56Q9D0R4 Zfp791-202ENSMUST00000211109 2946 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Ddx56Q9D0R4 Gm45734-201ENSMUST00000211916 411 ntBASIC6.63□□□□□ -1.35
Ddx56Q9D0R4 Gm30570-201ENSMUST00000213553 2651 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Ddx56Q9D0R4 AL603745.1-201ENSMUST00000215473 532 ntBASIC6.63□□□□□ -1.35
Ddx56Q9D0R4 Gm5427-201ENSMUST00000217680 2591 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Ddx56Q9D0R4 AC124510.2-201ENSMUST00000221958 683 ntBASIC6.63□□□□□ -1.35
Ddx56Q9D0R4 AC153153.2-201ENSMUST00000223572 411 ntBASIC6.63□□□□□ -1.35
Ddx56Q9D0R4 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Ddx56Q9D0R4 Eif2s3x-201ENSMUST00000050328 3647 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Ddx56Q9D0R4 Olfr813-201ENSMUST00000064893 933 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Ddx56Q9D0R4 Gm5160-201ENSMUST00000069552 444 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Ddx56Q9D0R4 Olfr508-201ENSMUST00000072914 1635 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Ddx56Q9D0R4 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Ddx56Q9D0R4 Mir138-1-201ENSMUST00000083480 99 ntBASIC6.63□□□□□ -1.35
Ddx56Q9D0R4 Gm10447-201ENSMUST00000084653 2307 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Ddx56Q9D0R4 Adam21-201ENSMUST00000008582 2911 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Ddx56Q9D0R4 Homez-201ENSMUST00000081162 5609 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Ddx56Q9D0R4 Kdm4c-202ENSMUST00000077851 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Ddx56Q9D0R4 Sytl2-206ENSMUST00000190731 3838 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Ddx56Q9D0R4 Rpgrip1l-201ENSMUST00000047783 7009 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Ddx56Q9D0R4 Ttk-201ENSMUST00000070326 2871 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Ddx56Q9D0R4 CT009765.1-201ENSMUST00000219088 2705 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Ddx56Q9D0R4 Gm45762-201ENSMUST00000212863 2619 ntBASIC6.63□□□□□ -1.35
Ddx56Q9D0R4 Olfr1215-203ENSMUST00000216271 2608 ntAPPRIS P1 TSL 3 BASIC6.63□□□□□ -1.35
Ddx56Q9D0R4 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Ddx56Q9D0R4 Pdzph1-201ENSMUST00000025064 4174 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Ddx56Q9D0R4 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Ddx56Q9D0R4 1700017N19Rik-204ENSMUST00000188736 1709 ntTSL 5 BASIC6.62□□□□□ -1.35
Ddx56Q9D0R4 Kcnj1-202ENSMUST00000172015 3075 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Ddx56Q9D0R4 Gm31520-202ENSMUST00000203574 1524 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Ddx56Q9D0R4 Nedd4-207ENSMUST00000184333 4034 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Ddx56Q9D0R4 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Ddx56Q9D0R4 Ighv1-24-201ENSMUST00000103509 294 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Ddx56Q9D0R4 Atp6ap1l-201ENSMUST00000109541 1186 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Ddx56Q9D0R4 Gm8250-201ENSMUST00000117398 774 ntBASIC6.62□□□□□ -1.35
Ddx56Q9D0R4 Gm11445-201ENSMUST00000119101 532 ntBASIC6.62□□□□□ -1.35
Ddx56Q9D0R4 Gm12506-201ENSMUST00000123620 806 ntTSL 5 BASIC6.62□□□□□ -1.35
Ddx56Q9D0R4 Gm16096-202ENSMUST00000149386 819 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms